Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE04G0176 Ceratophyllum demersum HOM05D006224 ORTHO05D007691 1.3e-221 772.7 377 100.0
Dinv41578 Davidia involucrata HOM05D006224 ORTHO05D007691 1.9e-124 449.9 325 64.6
Actinidia07421 Actinidia chinensis HOM05D006224 ORTHO05D007691 5.6e-124 448.4 325 64.3
QL02p086060 Quercus lobata HOM05D006224 ORTHO05D007691 9.6e-124 447.6 319 64.9
Manes.16G071100 Manihot esculenta HOM05D006224 ORTHO05D007691 2.1e-123 446.4 325 64.3
CANSAT56G1593 Cannabis sativa HOM05D006224 ORTHO05D007691 2.8e-123 446.0 367 60.5
arahy.Tifrunner.gnm1.ann1.X15ZNM Arachis hypogaea HOM05D006224 ORTHO05D007691 4.0e-122 442.2 369 60.7
Ciclev10008608m.g Citrus clementina HOM05D006224 ORTHO05D007691 4.0e-122 442.2 320 66.2
CANSAT56G0016 Cannabis sativa HOM05D006224 ORTHO05D007691 5.2e-122 441.8 367 59.9
TWI34G0303 Tripterygium wilfordii HOM05D006224 ORTHO05D007691 6.8e-122 441.4 319 64.6
TAR383G0021 Trochodendron aralioides HOM05D006224 ORTHO05D007691 1.2e-121 440.7 368 61.4
FAN23G1546 Fragaria x ananassa HOM05D006224 ORTHO05D007691 2.6e-121 439.5 363 59.8
arahy.Tifrunner.gnm1.ann1.NKB3PQ Arachis hypogaea HOM05D006224 ORTHO05D007691 4.4e-121 438.7 371 60.6
Cfa003290 Carpinus fangiana HOM05D006224 ORTHO05D007691 5.8e-121 438.3 365 59.2
Cc06_g09350 Coffea canephora HOM05D006224 ORTHO05D007691 1.3e-120 437.2 348 60.3
Glyma.09G187600 Glycine max HOM05D006224 ORTHO05D007691 1.3e-120 437.2 378 58.5
vmacro06195 Vaccinium macrocarpon HOM05D006224 ORTHO05D007691 1.7e-120 436.8 380 57.1
Atru.chr7.1298 Acer truncatum HOM05D006224 ORTHO05D007691 3.8e-120 435.6 325 64.9
Eucgr.E02819 Eucalyptus grandis HOM05D006224 ORTHO05D007691 4.9e-120 435.3 322 64.9
ClCG06G010400 Citrullus lanatus HOM05D006224 ORTHO05D007691 6.4e-120 434.9 324 63.6
FvH4_1g05360 Fragaria vesca HOM05D006224 ORTHO05D007691 1.4e-119 433.7 363 59.2
FAN19G0264 Fragaria x ananassa HOM05D006224 ORTHO05D007691 1.4e-119 433.7 368 59.0
TWI34G1467 Tripterygium wilfordii HOM05D006224 ORTHO05D007691 4.2e-119 432.2 319 61.4
FAN26G2363 Fragaria x ananassa HOM05D006224 ORTHO05D007691 5.4e-119 431.8 330 63.0
RcHm_v2.0_Chr2g0091041 Rosa chinensis HOM05D006224 ORTHO05D007691 7.1e-119 431.4 318 64.5
Hund26119 Selenicereus undatus HOM05D006224 ORTHO05D007691 7.1e-119 431.4 360 57.8
ATR0037G051 Amborella trichopoda HOM05D006224 ORTHO05D007691 1.6e-118 430.3 320 64.7
Rhsim03G0244800 Rhododendron simsii HOM05D006224 ORTHO05D007691 2.1e-118 429.9 308 65.3
HPP92_009101 Vanilla planifolia HOM05D006224 ORTHO05D007691 2.1e-118 429.9 355 60.6
QL02p086023 Quercus lobata HOM05D006224 ORTHO05D007691 2.7e-118 429.5 366 57.7
GSVIVG01015431001 Vitis vinifera HOM05D006224 ORTHO05D007691 2.7e-118 429.5 313 64.9
MELO3C025318.2 Cucumis melo HOM05D006224 ORTHO05D007691 6.0e-118 428.3 323 62.2
HanXRQChr05g0138301 Helianthus annuus HOM05D006224 ORTHO05D007691 7.8e-118 427.9 319 62.4
Phvul.004G160700 Phaseolus vulgaris HOM05D006224 ORTHO05D007691 1.0e-117 427.6 365 59.7
VMungo0464G0392 Vigna mungo HOM05D006224 ORTHO05D007691 1.0e-117 427.6 329 62.3
MD15G1189600 Malus domestica HOM05D006224 ORTHO05D007691 1.3e-117 427.2 329 62.9
GSVIVG01015429001 Vitis vinifera HOM05D006224 ORTHO05D007691 1.7e-117 426.8 319 63.3
PSO063G0773 Papaver somniferum HOM05D006224 ORTHO05D007691 2.3e-117 426.4 326 61.7
Lj2g0020407 Lotus japonicus HOM05D006224 ORTHO05D007691 3.0e-117 426.0 319 63.0
MBI06_g04550_MAGBIO Magnolia biondii HOM05D006224 ORTHO05D007691 3.9e-117 425.6 393 56.7
Zm00001eb309830 Zea mays HOM05D006224 ORTHO05D007691 6.6e-117 424.9 318 62.9
Cpa.g.sc23.139 Carica papaya HOM05D006224 ORTHO05D007691 8.7e-117 424.5 327 63.6
ClCG00G002580 Citrullus lanatus HOM05D006224 ORTHO05D007691 8.7e-117 424.5 319 63.3
Sed0009228 Sechium edule HOM05D006224 ORTHO05D007691 5.6e-116 421.8 370 57.8
PSO782G3139 Papaver somniferum HOM05D006224 ORTHO05D007691 7.3e-116 421.4 321 62.0
Haze_25683 Corylus avellana HOM05D006224 ORTHO05D007691 9.6e-116 421.0 384 55.2
Migut.K00473 Erythranthe guttata HOM05D006224 ORTHO05D007691 4.8e-115 418.7 340 59.1
CsaV3_1G030820 Cucumis sativus L. HOM05D006224 ORTHO05D007691 1.1e-114 417.5 322 61.2
FAN28G2414 Fragaria x ananassa HOM05D006224 ORTHO05D007691 1.1e-114 417.5 343 60.3
Lsat_1_v5_gn_8_94740 Lactuca sativa HOM05D006224 ORTHO05D007691 1.1e-114 417.5 337 58.2
AT5G19460 Arabidopsis thaliana HOM05D006224 ORTHO05D007691 1.4e-114 417.2 371 58.5
Ca_30117_v3 Cicer arietinum L. HOM05D006224 ORTHO05D007691 1.8e-114 416.8 355 59.2
CiPaw.03G235000 Carya illinoinensis HOM05D006224 ORTHO05D007691 2.4e-114 416.4 334 60.2
Lalb_Chr14g0371331 Lupinus albus HOM05D006224 ORTHO05D007691 3.1e-114 416.0 384 55.7
Thecc.09G114600 Theobroma cacao HOM05D006224 ORTHO05D007691 4.0e-114 415.6 366 57.4
Aqoxy5G03788 Aquilegia oxysepala HOM05D006224 ORTHO05D007691 6.9e-114 414.8 320 61.9
Gorai.004G279400 Gossypium raimondii HOM05D006224 ORTHO05D007691 1.5e-113 413.7 350 59.7
DCAR_010440 Daucus carota HOM05D006224 ORTHO05D007691 2.6e-113 412.9 325 59.4
Gohir.D08G261300 Gossypium hirsutum HOM05D006224 ORTHO05D007691 3.4e-113 412.5 350 59.4
Medtr6g086510 Medicago truncatula HOM05D006224 ORTHO05D007691 3.4e-113 412.5 373 57.4
Thhalv10013889m.g Eutrema salsugineum HOM05D006224 ORTHO05D007691 5.8e-113 411.8 357 58.0
ClCG00G002210 Citrullus lanatus HOM05D006224 ORTHO05D007691 9.9e-113 411.0 362 56.9
ClCG06G010410 Citrullus lanatus HOM05D006224 ORTHO05D007691 9.9e-113 411.0 362 56.9
Solyc07g009170.4 Solanum lycopersicum HOM05D006224 ORTHO05D007691 1.3e-112 410.6 327 59.9
Psat1g037920 Pisum sativum HOM05D006224 ORTHO05D007691 2.9e-112 409.5 316 64.2
Sopen07g017160 Solanum pennellii HOM05D006224 ORTHO05D007691 3.8e-112 409.1 327 59.9
AL6G30950 Arabidopsis lyrata HOM05D006224 ORTHO05D007691 6.4e-112 408.3 322 61.5
PGSC0003DMG400024204 Solanum tuberosum HOM05D006224 ORTHO05D007691 8.4e-112 407.9 322 60.9
Potri.006G157700 Populus trichocarpa HOM05D006224 ORTHO05D007691 1.1e-111 407.5 324 63.0
Carub.0006s1780 Capsella rubella HOM05D006224 ORTHO05D007691 1.9e-111 406.8 348 58.6
Gohir.A08G240600 Gossypium hirsutum HOM05D006224 ORTHO05D007691 2.4e-111 406.4 372 57.5
Ciclev10008605m.g Citrus clementina HOM05D006224 ORTHO05D007691 3.2e-111 406.0 374 55.9
Nitab4.5_0002361g0030 Nicotiana tabacum HOM05D006224 ORTHO05D007691 4.2e-111 405.6 335 59.7
Glyma.18G076000 Glycine max HOM05D006224 ORTHO05D007691 7.1e-111 404.8 360 56.4
Aa31LG11G5060 Aethionema arabicum HOM05D006224 ORTHO05D007691 2.1e-110 403.3 335 58.8
Nitab4.5_0013433g0030 Nicotiana tabacum HOM05D006224 ORTHO05D007691 2.1e-110 403.3 335 59.1
Sc08g0007140 Simmondsia chinensis HOM05D006224 ORTHO05D007691 1.3e-109 400.6 297 64.6
BolC9t58538H Brassica oleracea HOM05D006224 ORTHO05D007691 3.0e-109 399.4 327 58.7
AUR62011028 Chenopodium quinoa HOM05D006224 ORTHO05D007691 3.0e-109 399.4 382 53.4
PGR042G0994 Punica granatum HOM05D006224 ORTHO05D007691 1.6e-107 393.7 351 57.0
Duzib187G0885 Durio zibethinus HOM05D006224 ORTHO05D007691 2.1e-107 393.3 362 57.2
AL6G30960 Arabidopsis lyrata HOM05D006224 ORTHO05D007691 1.4e-106 390.6 321 58.9
AT5G19470 Arabidopsis thaliana HOM05D006224 ORTHO05D007691 9.0e-106 387.9 371 54.7
EL10Ac8g18541 Beta vulgaris HOM05D006224 ORTHO05D007691 1.2e-105 387.5 359 55.2
Sp6g24950 Schrenkiella parvula HOM05D006224 ORTHO05D007691 1.5e-105 387.1 340 57.1
FAN26G3318 Fragaria x ananassa HOM05D006224 ORTHO05D007691 2.6e-105 386.3 392 52.8
Oeu060631.1 Olea europaea HOM05D006224 ORTHO05D007691 3.4e-105 386.0 299 60.2
SalBow1G0968 Salvia bowleyana HOM05D006224 ORTHO05D007691 4.5e-105 385.6 357 54.3
CSS0033373 Camellia sinensis var. sinensis HOM05D006224 ORTHO05D007691 3.8e-104 382.5 393 52.4
Aqoxy5G03790 Aquilegia oxysepala HOM05D006224 ORTHO05D007691 4.9e-104 382.1 360 54.7
Ca_25513_v3 Cicer arietinum L. HOM05D006224 ORTHO05D007691 2.4e-103 379.8 282 63.5
A10p20240 Brassica napus HOM05D006224 ORTHO05D007691 1.2e-102 377.5 347 55.3
ECA236G3755 Erigeron canadensis HOM05D006224 ORTHO05D007691 1.2e-102 377.5 277 64.3
SGA_v2.0_scaffold23G10152 Striga asiatica HOM05D006224 ORTHO05D007691 3.5e-102 375.9 327 58.7
Peaxi162Scf00560g00629 Petunia axillaris HOM05D006224 ORTHO05D007691 4.6e-102 375.6 326 57.7
Sabra06G0124600 Salix brachista HOM05D006224 ORTHO05D007691 3.9e-101 372.5 314 60.8
THA.LOC104799742 Tarenaya hassleriana HOM05D006224 ORTHO05D007691 3.7e-99 365.9 282 60.3
CAN.G929.19 Capsicum annuum HOM05D006224 ORTHO05D007691 3.1e-98 362.8 276 63.4
C09p56840 Brassica napus HOM05D006224 ORTHO05D007691 6.9e-98 361.7 327 55.4
TPR.G31456 Trifolium pratense HOM05D006224 ORTHO05D007691 1.2e-97 360.9 332 56.3
TPR.G31453 Trifolium pratense HOM05D006224 ORTHO05D007691 5.5e-95 352.1 358 52.5
Mapoly0084s0007 Marchantia polymorpha HOM05D006224 ORTHO05D007691 2.3e-93 346.7 305 53.4
Nn8g39262 Nelumbo nucifera HOM05D006224 ORTHO05D007691 5.1e-93 345.5 320 54.4
BraA10t44095Z Brassica rapa HOM05D006224 ORTHO05D007691 2.4e-90 336.7 321 53.6
Pp3c12_9090 Physcomitrium patens HOM05D006224 ORTHO05D007691 7.6e-89 331.6 296 54.7
Lj7A644T17 Lonicera japonica HOM05D006224 ORTHO05D007691 2.8e-83 313.2 343 47.5
Potri.006G157800 Populus trichocarpa HOM05D006224 ORTHO05D007691 1.8e-82 310.5 324 51.9
SMO347G0504 Selaginella moellendorffii HOM05D006224 ORTHO05D007691 1.8e-82 310.5 294 53.7
Peaxi162Scf00560g00615 Petunia axillaris HOM05D006224 ORTHO05D007691 2.6e-81 306.6 279 54.1
HanXRQChr05g0139161 Helianthus annuus HOM05D006224 ORTHO05D007691 1.4e-79 300.8 298 51.3
Cre13.g582201 Chlamydomonas reinhardtii HOM05D006224 ORTHO05D007691 5.7e-76 288.9 300 48.3
Prupe.7G186600 Prunus persica HOM05D006224 ORTHO05D007691 3.8e-72 276.2 215 61.4
AagrBONN_evm.TU.Sc2ySwM_228.2202 Anthoceros agrestis HOM05D006224 ORTHO05D007691 7.9e-70 268.5 213 60.6
unitig_748.g7154 Utricularia gibba HOM05D006224 ORTHO05D007691 2.6e-68 263.5 236 55.1
Pp3c3_27400 Physcomitrium patens HOM05D006224 ORTHO05D007691 1.0e-64 251.5 300 41.0
AUR62033400 Chenopodium quinoa HOM05D006224 ORTHO05D007691 8.0e-62 241.9 275 47.6
Pp3c6_16000 Physcomitrium patens HOM05D006224 ORTHO05D007691 5.7e-60 235.7 298 41.9
MCO11G748 Micromonas commoda HOM05D006224 ORTHO05D007691 1.2e-57 228.0 291 42.6
PRCOL_00004258 Prasinoderma coloniale HOM05D006224 ORTHO05D007691 1.8e-53 214.2 290 41.4
Os09g0322200 Oryza sativa ssp. japonica HOM05D006224 ORTHO05D007691 1.4e-42 177.9 147 59.9
CARHR193460 Cardamine hirsuta HOM05D006224 ORTHO05D007691 1.8e-42 177.6 124 65.3
Cfa025487 Carpinus fangiana HOM05D006224 ORTHO05D007691 3.6e-30 136.7 225 37.3
Ah.09g227190 Amaranthus hybridus HOM05D006224 ORTHO05D007691 1.3e-27 128.3 88 62.5
unitig_748.g7155 Utricularia gibba HOM05D006224 ORTHO05D007691 2.7e-25 120.6 85 67.1
SEGI_32758 Sequoiadendron giganteum HOM05D006224 ORTHO05D007691 1.5e-23 114.8 69 71.0
SEGI_12041 Sequoiadendron giganteum HOM05D006224 ORTHO05D007691 5.8e-12 76.3 75 53.3
vmacro11393 Vaccinium macrocarpon HOM05D003441 ORTHO05D004516 1.6e-09 68.2 42 69.0
MSTRG.26438 Avicennia marina HOM05D006224 ORTHO05D007691 7.8e-09 65.9 65 46.2


User provided reference genes

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