Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE03G0170 Ceratophyllum demersum HOM05D002306 ORTHO05D005773 1.4e-62 242.7 116 100.0
CDE04G0267 Ceratophyllum demersum HOM05D002306 ORTHO05D005773 1.1e-35 153.3 81 92.6
PSO135G0144 Papaver somniferum HOM05D002306 ORTHO05D005773 5.2e-28 127.9 94 69.1
Oeu060994.1 Olea europaea HOM05D002306 ORTHO05D005773 4.4e-27 124.8 84 73.8
Hund21009 Selenicereus undatus HOM05D002306 ORTHO05D005773 4.4e-27 124.8 82 72.0
PSO384G1073 Papaver somniferum HOM05D002306 ORTHO05D005773 5.7e-27 124.4 93 67.7
MBI06_g46366_MAGBIO Magnolia biondii HOM05D002306 ORTHO05D005773 9.7e-27 123.6 87 70.1
CARHR266070 Cardamine hirsuta HOM05D002306 ORTHO05D005773 1.3e-26 123.2 81 69.1
Aqoxy6G02068 Aquilegia oxysepala HOM05D002306 ORTHO05D005773 1.7e-26 122.9 89 66.3
Duzib205G1406 Durio zibethinus HOM05D002306 ORTHO05D005773 1.7e-26 122.9 86 69.8
Cfa016243 Carpinus fangiana HOM05D002306 ORTHO05D005773 2.2e-26 122.5 85 71.8
Aa31LG3G9420 Aethionema arabicum HOM05D002306 ORTHO05D005773 4.8e-26 121.3 85 69.4
ClCG01G000390 Citrullus lanatus HOM05D002306 ORTHO05D005773 4.8e-26 121.3 87 67.8
Haze_00198 Corylus avellana HOM05D002306 ORTHO05D005773 4.8e-26 121.3 85 70.6
C09p42760 Brassica napus HOM05D002306 ORTHO05D005773 6.3e-26 120.9 118 55.1
Oeu037052.1 Olea europaea HOM05D002306 ORTHO05D005773 6.3e-26 120.9 84 72.6
Rhsim09G0206400 Rhododendron simsii HOM05D002306 ORTHO05D005773 6.3e-26 120.9 80 72.5
AL8G27680 Arabidopsis lyrata HOM05D002306 ORTHO05D005773 8.2e-26 120.6 81 67.9
CiPaw.05G198100 Carya illinoinensis HOM05D002306 ORTHO05D005773 8.2e-26 120.6 85 70.6
CsaV3_5G000460 Cucumis sativus L. HOM05D002306 ORTHO05D005773 8.2e-26 120.6 87 66.7
Hund11654 Selenicereus undatus HOM05D002306 ORTHO05D005773 8.2e-26 120.6 84 69.0
Sabra15G0009300 Salix brachista HOM05D002306 ORTHO05D005773 1.1e-25 120.2 92 66.3
MELO3C005890.2 Cucumis melo HOM05D002306 ORTHO05D005773 1.4e-25 119.8 87 66.7
Ciclev10020415m.g Citrus clementina HOM05D002306 ORTHO05D005773 1.8e-25 119.4 86 68.6
Potri.012G017100 Populus trichocarpa HOM05D002306 ORTHO05D005773 1.8e-25 119.4 90 66.7
Dinv29264 Davidia involucrata HOM05D002306 ORTHO05D005773 2.4e-25 119.0 84 67.9
Nn3g18949 Nelumbo nucifera HOM05D002306 ORTHO05D005773 2.4e-25 119.0 91 65.9
CANSAT21G2187 Cannabis sativa HOM05D002306 ORTHO05D005773 3.1e-25 118.6 87 66.7
BcaC04g20512 Brassica carinata HOM05D002306 ORTHO05D005773 4.1e-25 118.2 84 66.7
BolC9t57152H Brassica oleracea HOM05D002306 ORTHO05D005773 4.1e-25 118.2 84 66.7
Thecc.03G200900 Theobroma cacao HOM05D002306 ORTHO05D005773 4.1e-25 118.2 86 67.4
Migut.F00200 Erythranthe guttata HOM05D002306 ORTHO05D005773 5.3e-25 117.9 82 70.7
Potri.015G011300 Populus trichocarpa HOM05D002306 ORTHO05D005773 5.3e-25 117.9 89 65.2
AT5G53050 Arabidopsis thaliana HOM05D002306 ORTHO05D005773 7.0e-25 117.5 81 66.7
A10p10540 Brassica napus HOM05D002306 ORTHO05D005773 7.0e-25 117.5 81 66.7
vmacro10129 Vaccinium macrocarpon HOM05D002306 ORTHO05D005773 7.0e-25 117.5 80 71.2
EL10Ac3g05271 Beta vulgaris HOM05D002306 ORTHO05D005773 9.1e-25 117.1 81 67.9
BcaC01g06217 Brassica carinata HOM05D002306 ORTHO05D005773 9.1e-25 117.1 84 64.3
C03p18010 Brassica napus HOM05D002306 ORTHO05D005773 9.1e-25 117.1 84 64.3
BolC3t14206H Brassica oleracea HOM05D002306 ORTHO05D005773 9.1e-25 117.1 84 64.3
Carub.0008s1325 Capsella rubella HOM05D002306 ORTHO05D005773 9.1e-25 117.1 81 65.4
CiPaw.06G045200 Carya illinoinensis HOM05D002306 ORTHO05D005773 9.1e-25 117.1 85 67.1
Manes.01G185000 Manihot esculenta HOM05D002306 ORTHO05D005773 9.1e-25 117.1 89 66.3
SalBow4G3229 Salvia bowleyana HOM05D002306 ORTHO05D005773 9.1e-25 117.1 82 70.7
TWI39G0548 Tripterygium wilfordii HOM05D002306 ORTHO05D005773 9.1e-25 117.1 91 65.9
BcaB01g04217 Brassica carinata HOM05D002306 ORTHO05D005773 1.2e-24 116.7 83 63.9
Duzib084G0543 Durio zibethinus HOM05D002306 ORTHO05D005773 1.6e-24 116.3 86 68.6
Nitab4.5_0005491g0070 Nicotiana tabacum HOM05D002306 ORTHO05D005773 1.6e-24 116.3 82 73.2
Sp6g15210 Schrenkiella parvula HOM05D002306 ORTHO05D005773 1.6e-24 116.3 82 64.6
VMungo0647G1725 Vigna mungo HOM05D002306 ORTHO05D005773 1.6e-24 116.3 101 56.4
Actinidia34230 Actinidia chinensis HOM05D002306 ORTHO05D005773 2.0e-24 115.9 91 63.7
Nn1g00292 Nelumbo nucifera HOM05D002306 ORTHO05D005773 2.0e-24 115.9 91 65.9
MD07G1293200 Malus domestica HOM05D002306 ORTHO05D005773 2.6e-24 115.5 87 66.7
BcaB08g35665 Brassica carinata HOM05D002306 ORTHO05D005773 3.5e-24 115.2 81 66.7
GSVIVG01038567001 Vitis vinifera HOM05D002306 ORTHO05D005773 3.5e-24 115.2 89 64.0
A03p15420 Brassica napus HOM05D002306 ORTHO05D005773 4.5e-24 114.8 84 63.1
A03p15450 Brassica napus HOM05D002306 ORTHO05D005773 4.5e-24 114.8 81 63.0
BraA03t10835Z Brassica rapa HOM05D002306 ORTHO05D005773 4.5e-24 114.8 81 63.0
BraA03t10837Z Brassica rapa HOM05D002306 ORTHO05D005773 4.5e-24 114.8 81 63.0
Nitab4.5_0000548g0060 Nicotiana tabacum HOM05D002306 ORTHO05D005773 4.5e-24 114.8 80 71.2
Sed0009393 Sechium edule HOM05D002306 ORTHO05D005773 4.5e-24 114.8 87 64.4
SGA_v2.0_scaffold192G40528 Striga asiatica HOM05D005626 ORTHO05D007032 4.5e-24 114.8 85 68.2
Actinidia06142 Actinidia chinensis HOM05D002306 ORTHO05D005773 5.9e-24 114.4 81 67.9
arahy.Tifrunner.gnm1.ann1.4T5RFS Arachis hypogaea HOM05D002306 ORTHO05D005773 5.9e-24 114.4 81 67.9
arahy.Tifrunner.gnm1.ann1.FPLI9C Arachis hypogaea HOM05D002306 ORTHO05D005773 5.9e-24 114.4 81 67.9
Ca_12784_v3 Cicer arietinum L. HOM05D002306 ORTHO05D005773 5.9e-24 114.4 85 64.7
Ca_12788_v3 Cicer arietinum L. HOM05D002306 ORTHO05D005773 5.9e-24 114.4 85 64.7
Medtr1g007860 Medicago truncatula HOM05D002306 ORTHO05D005773 5.9e-24 114.4 84 64.3
Peaxi162Scf00740g00143 Petunia axillaris HOM05D002306 ORTHO05D005773 5.9e-24 114.4 83 69.9
SGA_v2.0_scaffold44G16812 Striga asiatica HOM05D002306 ORTHO05D005773 5.9e-24 114.4 82 68.3
BraA10t43138Z Brassica rapa HOM05D002306 ORTHO05D005773 7.7e-24 114.0 81 65.4
Prupe.2G313000 Prunus persica HOM05D002306 ORTHO05D005773 7.7e-24 114.0 87 64.4
Sabra12G0015300 Salix brachista HOM05D002306 ORTHO05D005773 7.7e-24 114.0 90 65.6
Lj1g0011159 Lotus japonicus HOM05D002306 ORTHO05D005773 1.0e-23 113.6 85 65.9
QL09p008623 Quercus lobata HOM05D002306 ORTHO05D005773 1.0e-23 113.6 89 62.9
Ah.13g070360 Amaranthus hybridus HOM05D002306 ORTHO05D005773 1.3e-23 113.2 81 66.7
Cpa.g.sc3.100 Carica papaya HOM05D002306 ORTHO05D005773 1.3e-23 113.2 91 61.5
Manes.05G190400 Manihot esculenta HOM05D002306 ORTHO05D005773 1.3e-23 113.2 89 62.9
Atru.chr12.2238 Acer truncatum HOM05D002306 ORTHO05D005773 1.7e-23 112.8 85 64.7
Phvul.001G075000 Phaseolus vulgaris HOM05D002306 ORTHO05D005773 1.7e-23 112.8 81 65.4
Thhalv10013609m.g Eutrema salsugineum HOM05D002306 ORTHO05D005773 2.2e-23 112.5 82 64.6
Gorai.008G267900 Gossypium raimondii HOM05D002306 ORTHO05D005773 2.2e-23 112.5 86 62.8
Hma1.2p1_1587F.1_g292250 Hydrangea macrophylla HOM05D002306 ORTHO05D005773 2.2e-23 112.5 89 61.8
AUR62019412 Chenopodium quinoa HOM05D002306 ORTHO05D005773 2.9e-23 112.1 81 65.4
Eucgr.K00394 Eucalyptus grandis HOM05D002306 ORTHO05D005773 2.9e-23 112.1 91 60.4
Gohir.A12G249000 Gossypium hirsutum HOM05D002306 ORTHO05D005773 2.9e-23 112.1 86 64.0
Sc13g0009860 Simmondsia chinensis HOM05D002306 ORTHO05D005773 2.9e-23 112.1 90 62.2
CSS0036676 Camellia sinensis var. sinensis HOM05D002306 ORTHO05D005773 3.8e-23 111.7 92 59.8
CAN.G481.26 Capsicum annuum HOM05D002306 ORTHO05D005773 3.8e-23 111.7 82 67.1
DCAR_020335 Daucus carota HOM05D002306 ORTHO05D005773 3.8e-23 111.7 87 64.4
THA.LOC104799971 Tarenaya hassleriana HOM05D002306 ORTHO05D005773 3.8e-23 111.7 90 63.3
Psat6g034960 Pisum sativum HOM05D002306 ORTHO05D005773 5.0e-23 111.3 83 62.7
PGR142G2770 Punica granatum HOM05D002306 ORTHO05D005773 5.0e-23 111.3 89 62.9
Sopen03g022820 Solanum pennellii HOM05D002306 ORTHO05D005773 5.0e-23 111.3 81 67.9
Lsat_1_v5_gn_9_49801 Lactuca sativa HOM05D002306 ORTHO05D005773 1.1e-22 110.2 100 60.0
PGSC0003DMG401018530 Solanum tuberosum HOM05D002306 ORTHO05D005773 1.1e-22 110.2 81 67.9
FAN01G0065 Fragaria x ananassa HOM05D002306 ORTHO05D005773 1.5e-22 109.8 86 64.0
Gohir.D12G249800 Gossypium hirsutum HOM05D002306 ORTHO05D005773 1.5e-22 109.8 86 61.6
RcHm_v2.0_Chr1g0381481 Rosa chinensis HOM05D002306 ORTHO05D005773 1.5e-22 109.8 86 65.1
Glyma.19G065800 Glycine max HOM05D002306 ORTHO05D005773 1.9e-22 109.4 85 63.5
MD01G1222600 Malus domestica HOM05D002306 ORTHO05D005773 1.9e-22 109.4 87 65.5
ECA232G4612 Erigeron canadensis HOM05D002306 ORTHO05D005773 2.5e-22 109.0 103 57.3
FvH4_7g31980 Fragaria vesca HOM05D002306 ORTHO05D005773 3.2e-22 108.6 86 62.8
FAN06G4818 Fragaria x ananassa HOM05D002306 ORTHO05D005773 3.2e-22 108.6 86 62.8
Os05g0542200 Oryza sativa ssp. japonica HOM05D002306 ORTHO05D005773 3.2e-22 108.6 105 57.1
Sp7g25780 Schrenkiella parvula HOM05D002306 ORTHO05D005773 3.2e-22 108.6 80 63.8
Lalb_Chr01g0013731 Lupinus albus HOM05D002306 ORTHO05D005773 4.2e-22 108.2 86 61.6
Zm00001eb342430 Zea mays HOM05D002306 ORTHO05D005773 4.2e-22 108.2 84 64.3
PGR042G0827 Punica granatum HOM05D002306 ORTHO05D005773 5.5e-22 107.8 94 59.6
Sed0011455 Sechium edule HOM05D002306 ORTHO05D005773 5.5e-22 107.8 90 58.9
Solyc03g083010.3 Solanum lycopersicum HOM05D002306 ORTHO05D005773 5.5e-22 107.8 81 66.7
ATR0602G226 Amborella trichopoda HOM05D002306 ORTHO05D005773 7.2e-22 107.5 99 56.6
FAN10G0091 Fragaria x ananassa HOM05D002306 ORTHO05D005773 7.2e-22 107.5 87 60.9
FAN10G2791 Fragaria x ananassa HOM05D002306 ORTHO05D005773 7.2e-22 107.5 87 60.9
AUR62006082 Chenopodium quinoa HOM05D002306 ORTHO05D005773 9.4e-22 107.1 81 63.0
FAN03G1878 Fragaria x ananassa HOM05D002306 ORTHO05D005773 9.4e-22 107.1 87 60.9
Glyma.14G162400 Glycine max HOM05D002306 ORTHO05D005773 9.4e-22 107.1 81 63.0
Lsat_1_v5_gn_2_136261 Lactuca sativa HOM05D002306 ORTHO05D005773 1.2e-21 106.7 84 63.1
HanXRQChr15g0485691 Helianthus annuus HOM05D002306 ORTHO05D005773 1.6e-21 106.3 104 56.7
Actinidia08661 Actinidia chinensis HOM05D002306 ORTHO05D005773 3.6e-21 105.1 95 57.9
Cc02_g01380 Coffea canephora HOM05D002306 ORTHO05D005773 6.1e-21 104.4 84 60.7
Actinidia08663 Actinidia chinensis HOM05D002306 ORTHO05D005773 1.0e-20 103.6 95 57.9
Zm00001eb294430 Zea mays HOM05D002306 ORTHO05D005773 1.8e-20 102.8 92 56.5
HanXRQChr04g0100471 Helianthus annuus HOM05D002306 ORTHO05D005773 6.8e-20 100.9 80 66.2
HPP92_010499 Vanilla planifolia HOM05D002306 ORTHO05D005773 1.5e-19 99.8 89 57.3
MBI06_g36471_MAGBIO Magnolia biondii HOM05D002306 ORTHO05D005773 2.6e-19 99.0 104 51.9
unitig_748.g7291 Utricularia gibba HOM05D002306 ORTHO05D005773 3.4e-19 98.6 80 62.5
Eucgr.A01449 Eucalyptus grandis HOM05D002306 ORTHO05D005773 4.4e-19 98.2 81 59.3
SHI02360 Sapria himalayana HOM05D002306 ORTHO05D005773 6.3e-18 94.4 88 53.4
SMO147G0069 Selaginella moellendorffii HOM05D002306 ORTHO05D005773 8.3e-18 94.0 88 54.5
Mapoly0155s0003 Marchantia polymorpha HOM05D002306 ORTHO05D005773 4.1e-17 91.7 81 53.1
CBR_g39074 Chara braunii HOM05D002306 ORTHO05D005773 1.6e-16 89.7 118 44.9
CBR_g52250 Chara braunii HOM05D002306 ORTHO05D005773 2.7e-16 89.0 98 50.0
Pp3c4_28770 Physcomitrium patens HOM05D002306 ORTHO05D005773 2.7e-16 89.0 93 50.5
AagrBONN_evm.TU.Sc2ySwM_228.3658 Anthoceros agrestis HOM05D002306 ORTHO05D005773 2.2e-15 85.9 85 50.6
Cre11.g481250 Chlamydomonas reinhardtii HOM05D002306 ORTHO05D005773 3.4e-11 72.0 61 55.7
Lj3C903G5 Lonicera japonica HOM05D002306 ORTHO05D005773 4.4e-11 71.6 55 65.5
TAR629G2756 Trochodendron aralioides HOM05D002306 ORTHO05D005773 1.4e-09 66.6 63 55.6
COL.COLO4_16789 Corchorus olitorius HOM05D002476 ORTHO05D002652 5.4e-09 64.7 53 60.4
Cre02.g077451 Chlamydomonas reinhardtii HOM05D002306 ORTHO05D005773 3.5e-08 62.0 52 50.0
TPR.G40491 Trifolium pratense HOM05D002306 ORTHO05D005773 8.6e-07 57.4 28 85.7


User provided reference genes

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