Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE03G0089 Ceratophyllum demersum HOM05D006432 ORTHO05D008257 1.1e-110 403.3 204 100.0
CDE04G3487 Ceratophyllum demersum HOM05D006432 ORTHO05D008257 1.8e-76 289.7 283 60.1
arahy.Tifrunner.gnm1.ann1.508QQU Arachis hypogaea HOM05D006432 ORTHO05D008257 1.1e-44 184.1 202 53.0
arahy.Tifrunner.gnm1.ann1.X8C4EZ Arachis hypogaea HOM05D006432 ORTHO05D008257 2.4e-44 183.0 202 51.5
SGA_v2.0_scaffold43G16214 Striga asiatica HOM05D006432 ORTHO05D008257 2.4e-44 183.0 136 66.2
Rhsim02G0041500 Rhododendron simsii HOM05D006432 ORTHO05D008257 5.9e-43 178.3 114 75.4
Dinv27072 Davidia involucrata HOM05D006432 ORTHO05D008257 7.6e-43 177.9 114 78.1
Cfa014742 Carpinus fangiana HOM05D006432 ORTHO05D008257 1.0e-42 177.6 114 77.2
Haze_11417 Corylus avellana HOM05D006432 ORTHO05D008257 1.3e-42 177.2 114 78.1
Potri.008G169100 Populus trichocarpa HOM05D006432 ORTHO05D008257 1.3e-42 177.2 114 76.3
Sabra08G0128900 Salix brachista HOM05D006432 ORTHO05D008257 1.7e-42 176.8 114 75.4
FAN12G0128 Fragaria x ananassa HOM05D006432 ORTHO05D008257 2.2e-42 176.4 114 75.4
FAN17G1327 Fragaria x ananassa HOM05D006432 ORTHO05D008257 2.2e-42 176.4 114 75.4
TWI73G0471 Tripterygium wilfordii HOM05D006432 ORTHO05D008257 2.2e-42 176.4 114 75.4
Ciclev10007095m.g Citrus clementina HOM05D006432 ORTHO05D008257 2.9e-42 176.0 114 77.2
Peaxi162Scf00392g00732 Petunia axillaris HOM05D006432 ORTHO05D008257 2.9e-42 176.0 114 77.2
Glyma.20G207100 Glycine max HOM05D006432 ORTHO05D008257 3.8e-42 175.6 114 77.2
PGR031G2997 Punica granatum HOM05D006432 ORTHO05D008257 3.8e-42 175.6 114 76.3
CiPaw.01G181700 Carya illinoinensis HOM05D006432 ORTHO05D008257 5.0e-42 175.3 114 77.2
ClCG05G004210 Citrullus lanatus HOM05D006432 ORTHO05D008257 5.0e-42 175.3 114 76.3
QL06p019206 Quercus lobata HOM05D006432 ORTHO05D008257 5.0e-42 175.3 113 75.2
FAN22G0893 Fragaria x ananassa HOM05D006432 ORTHO05D008257 6.5e-42 174.9 114 74.6
Manes.15G043100 Manihot esculenta HOM05D006432 ORTHO05D008257 8.5e-42 174.5 114 73.7
Hma1.2p1_0385F.1_g141240 Hydrangea macrophylla HOM05D006432 ORTHO05D008257 1.1e-41 174.1 114 75.4
Lalb_Chr06g0169201 Lupinus albus HOM05D006432 ORTHO05D008257 1.1e-41 174.1 115 77.4
CAN.G220.38 Capsicum annuum HOM05D006432 ORTHO05D008257 1.9e-41 173.3 114 73.7
MELO3C006407.2 Cucumis melo HOM05D006432 ORTHO05D008257 1.9e-41 173.3 118 72.9
CsaV3_3G011940 Cucumis sativus L. HOM05D006432 ORTHO05D008257 1.9e-41 173.3 114 75.4
GSVIVG01027851001 Vitis vinifera HOM05D006432 ORTHO05D008257 1.9e-41 173.3 114 73.7
CSS0006599 Camellia sinensis var. sinensis HOM05D006432 ORTHO05D008257 2.5e-41 172.9 114 72.8
Glyma.10G182900 Glycine max HOM05D006432 ORTHO05D008257 2.5e-41 172.9 114 76.3
Sed0005439 Sechium edule HOM05D006432 ORTHO05D008257 2.5e-41 172.9 114 73.7
Thecc.04G259000 Theobroma cacao HOM05D006432 ORTHO05D008257 2.5e-41 172.9 114 74.6
Nitab4.5_0000596g0040 Nicotiana tabacum HOM05D006432 ORTHO05D008257 3.2e-41 172.6 114 74.6
Solyc09g090330.3 Solanum lycopersicum HOM05D006432 ORTHO05D008257 3.2e-41 172.6 114 74.6
Nitab4.5_0000044g0560 Nicotiana tabacum HOM05D006432 ORTHO05D008257 4.2e-41 172.2 114 73.7
vmacro15458 Vaccinium macrocarpon HOM05D006432 ORTHO05D008257 4.2e-41 172.2 114 73.7
ATR0582G319 Amborella trichopoda HOM05D006432 ORTHO05D008257 5.5e-41 171.8 114 75.4
MD16G1221800 Malus domestica HOM05D006432 ORTHO05D008257 5.5e-41 171.8 114 73.7
Sopen09g033230 Solanum pennellii HOM05D006432 ORTHO05D008257 7.2e-41 171.4 114 73.7
Cc03_g05780 Coffea canephora HOM05D006432 ORTHO05D008257 9.3e-41 171.0 114 73.7
Lj5g0003574 Lotus japonicus HOM05D006432 ORTHO05D008257 9.3e-41 171.0 114 74.6
Os11g0595200 Oryza sativa ssp. japonica HOM05D006432 ORTHO05D008257 9.3e-41 171.0 114 72.8
RcHm_v2.0_Chr4g0394281 Rosa chinensis HOM05D006432 ORTHO05D008257 9.3e-41 171.0 114 71.9
PGSC0003DMG400017164 Solanum tuberosum HOM05D006432 ORTHO05D008257 9.3e-41 171.0 114 72.8
Atru.chr4.2005 Acer truncatum HOM05D006432 ORTHO05D008257 1.2e-40 170.6 116 75.0
Actinidia11356 Actinidia chinensis HOM05D006432 ORTHO05D008257 1.2e-40 170.6 114 73.7
Actinidia39914 Actinidia chinensis HOM05D006432 ORTHO05D008257 1.2e-40 170.6 114 72.8
Eucgr.H00144 Eucalyptus grandis HOM05D006432 ORTHO05D008257 1.6e-40 170.2 114 75.4
COL.COLO4_15916 Corchorus olitorius HOM05D006432 ORTHO05D008257 2.1e-40 169.9 114 73.7
Medtr1g075660 Medicago truncatula HOM05D006432 ORTHO05D008257 2.1e-40 169.9 114 71.9
EL10Ac3g04982 Beta vulgaris HOM05D006432 ORTHO05D008257 2.7e-40 169.5 114 71.9
MBI07_g31085_MAGBIO Magnolia biondii HOM05D006432 ORTHO05D008257 2.7e-40 169.5 114 71.9
TPR.G10084 Trifolium pratense HOM05D006432 ORTHO05D008257 3.6e-40 169.1 115 72.2
Zm00001eb114860 Zea mays HOM05D006432 ORTHO05D008257 3.6e-40 169.1 114 71.9
MSTRG.9882 Avicennia marina HOM05D006432 ORTHO05D008257 4.6e-40 168.7 114 71.9
Psat6g122560 Pisum sativum HOM05D006432 ORTHO05D008257 4.6e-40 168.7 114 72.8
Hund11907 Selenicereus undatus HOM05D006432 ORTHO05D008257 4.6e-40 168.7 114 71.1
Ah.13g072590 Amaranthus hybridus HOM05D006432 ORTHO05D008257 6.1e-40 168.3 114 70.2
Sc13g0005860 Simmondsia chinensis HOM05D006432 ORTHO05D008257 6.1e-40 168.3 114 71.1
VMungo0720G1276 Vigna mungo HOM05D006432 ORTHO05D008257 6.1e-40 168.3 114 73.7
Prupe.1G042200 Prunus persica HOM05D006432 ORTHO05D008257 1.0e-39 167.5 114 72.8
Gohir.D09G229900 Gossypium hirsutum HOM05D006432 ORTHO05D008257 2.3e-39 166.4 114 70.2
Gorai.006G252600 Gossypium raimondii HOM05D006432 ORTHO05D008257 2.3e-39 166.4 114 70.2
HanXRQChr14g0434951 Helianthus annuus HOM05D006432 ORTHO05D008257 2.3e-39 166.4 114 71.9
Cpa.g.sc44.36 Carica papaya HOM05D006432 ORTHO05D008257 3.0e-39 166.0 109 73.4
HPP92_005402 Vanilla planifolia HOM05D006432 ORTHO05D008257 3.0e-39 166.0 111 72.1
AUR62015546 Chenopodium quinoa HOM05D006432 ORTHO05D008257 3.9e-39 165.6 114 70.2
Duzib052G0458 Durio zibethinus HOM05D006432 ORTHO05D008257 3.9e-39 165.6 119 69.7
Lalb_Chr21g0312161 Lupinus albus HOM05D006432 ORTHO05D008257 5.1e-39 165.2 114 71.9
Aqoxy5G00185 Aquilegia oxysepala HOM05D006432 ORTHO05D008257 6.7e-39 164.9 114 71.9
Migut.N00285 Erythranthe guttata HOM05D006432 ORTHO05D008257 6.7e-39 164.9 114 71.9
Gohir.A09G228800 Gossypium hirsutum HOM05D006432 ORTHO05D008257 6.7e-39 164.9 114 69.3
PSO478G2331 Papaver somniferum HOM05D006432 ORTHO05D008257 6.7e-39 164.9 114 71.9
AUR62002163 Chenopodium quinoa HOM05D006432 ORTHO05D008257 8.7e-39 164.5 114 70.2
Lsat_1_v5_gn_2_40021 Lactuca sativa HOM05D006432 ORTHO05D008257 8.7e-39 164.5 114 71.9
Lj3A686T58 Lonicera japonica HOM05D006432 ORTHO05D008257 1.1e-38 164.1 119 68.9
Ca_09849_v3 Cicer arietinum L. HOM05D006432 ORTHO05D008257 3.3e-38 162.5 114 69.3
Aa31LG8G9890 Aethionema arabicum HOM05D006432 ORTHO05D008257 1.3e-37 160.6 114 66.7
THA.LOC104804760 Tarenaya hassleriana HOM05D006432 ORTHO05D008257 2.2e-37 159.8 114 67.5
Oeu059409.1 Olea europaea HOM05D006432 ORTHO05D008257 3.7e-37 159.1 114 71.1
PSO017G5682 Papaver somniferum HOM05D006432 ORTHO05D008257 3.7e-37 159.1 114 68.4
A07p09040 Brassica napus HOM05D006432 ORTHO05D008257 4.8e-37 158.7 114 65.8
C07p14010 Brassica napus HOM05D006432 ORTHO05D008257 4.8e-37 158.7 114 64.9
CARHR099370 Cardamine hirsuta HOM05D006432 ORTHO05D008257 4.8e-37 158.7 114 66.7
ECA240G3223 Erigeron canadensis HOM05D002023 ORTHO05D002049 6.3e-37 158.3 107 73.8
BolC7t41898H Brassica oleracea HOM05D006432 ORTHO05D008257 8.2e-37 157.9 114 64.9
BraA07t28698Z Brassica rapa HOM05D006432 ORTHO05D008257 8.2e-37 157.9 114 64.9
CANSAT78G0744 Cannabis sativa HOM05D006432 ORTHO05D008257 1.1e-36 157.5 116 68.1
Thhalv10021276m.g Eutrema salsugineum HOM05D006432 ORTHO05D008257 1.4e-36 157.1 114 64.9
BcaC06g35517 Brassica carinata HOM05D006432 ORTHO05D008257 1.8e-36 156.8 114 64.0
AL3G38060 Arabidopsis lyrata HOM05D006432 ORTHO05D008257 4.1e-36 155.6 114 64.9
AT3G23400 Arabidopsis thaliana HOM05D006432 ORTHO05D008257 6.9e-36 154.8 114 64.9
Carub.0003s2366 Capsella rubella HOM05D006432 ORTHO05D008257 6.9e-36 154.8 114 64.9
Sp3g21070 Schrenkiella parvula HOM05D006432 ORTHO05D008257 9.0e-36 154.5 114 63.2
Nn3g19719 Nelumbo nucifera HOM05D006432 ORTHO05D008257 5.5e-33 145.2 114 69.3
Pp3c11_17240 Physcomitrium patens HOM05D006432 ORTHO05D008257 4.6e-32 142.1 114 61.4
SGA_v2.0_scaffold370G50119 Striga asiatica HOM05D006432 ORTHO05D008257 6.1e-32 141.7 105 64.8
Oeu055241.1 Olea europaea HOM05D000508 ORTHO05D000371 2.3e-31 139.8 168 49.4
unitig_0.g1188 Utricularia gibba HOM05D006432 ORTHO05D008257 1.1e-30 137.5 118 61.0
Hma1.2p1_0385F.1_g141230 Hydrangea macrophylla HOM05D006432 ORTHO05D008257 1.4e-28 130.6 86 74.4
AagrBONN_evm.TU.Sc2ySwM_228.2035 Anthoceros agrestis HOM05D006432 ORTHO05D008257 1.2e-27 127.5 116 56.9
SMO141G0176 Selaginella moellendorffii HOM05D006432 ORTHO05D008257 2.0e-27 126.7 111 58.6
SEGI_38471 Sequoiadendron giganteum HOM05D006432 ORTHO05D008257 4.5e-27 125.6 111 56.8
BcaB05g22938 Brassica carinata HOM05D006432 ORTHO05D008257 2.5e-25 119.8 81 66.7
MD13G1216500 Malus domestica HOM05D006432 ORTHO05D008257 1.6e-24 117.1 114 55.3
BcaB04g17238 Brassica carinata HOM05D006432 ORTHO05D008257 7.9e-24 114.8 82 63.4
BcaB02g08931 Brassica carinata HOM05D006432 ORTHO05D008257 1.0e-23 114.4 81 64.2
Mapoly0012s0134 Marchantia polymorpha HOM05D006432 ORTHO05D008257 1.0e-23 114.4 111 49.5
BcaB01g01688 Brassica carinata HOM05D006432 ORTHO05D008257 1.4e-23 114.0 104 53.8
Nn1g02871 Nelumbo nucifera HOM05D006432 ORTHO05D008257 5.9e-19 98.6 57 77.2
CBR_g30839 Chara braunii HOM05D006432 ORTHO05D008257 1.6e-16 90.5 122 40.2
BcaB07g33946 Brassica carinata HOM05D006432 ORTHO05D008257 2.3e-15 86.7 59 62.7
Os05g0304200 Oryza sativa ssp. japonica HOM05D006432 ORTHO05D008257 2.1e-08 63.5 43 67.4
Sabra10G0037800 Salix brachista HOM05D006432 ORTHO05D008257 4.7e-08 62.4 39 71.8
MCO05G338 Micromonas commoda HOM05D006432 ORTHO05D008257 1.4e-07 60.8 116 35.3
Dinv29840 Davidia involucrata HOM05D006432 ORTHO05D008257 1.5e-06 57.4 27 92.6


User provided reference genes

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