Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE02G4342 Ceratophyllum demersum HOM05D004566 ORTHO05D006041 4.3e-92 341.3 170 100.0
CDE06G0573 Ceratophyllum demersum HOM05D004566 ORTHO05D006041 3.4e-68 261.9 136 97.8
PSO170G1270 Papaver somniferum HOM05D004566 ORTHO05D006041 1.2e-57 226.9 136 81.6
PSO017G6839 Papaver somniferum HOM05D004566 ORTHO05D006041 1.6e-57 226.5 136 81.6
HPP92_000105 Vanilla planifolia HOM05D004566 ORTHO05D006041 7.7e-57 224.2 136 82.4
ATR0706G031 Amborella trichopoda HOM05D004566 ORTHO05D006041 1.0e-56 223.8 136 80.9
MBI11_g07422_MAGBIO Magnolia biondii HOM05D004566 ORTHO05D006041 1.0e-56 223.8 136 83.1
Duzib093G0819 Durio zibethinus HOM05D004566 ORTHO05D006041 8.6e-56 220.7 140 80.0
Lj1g0025718 Lotus japonicus HOM05D004566 ORTHO05D006041 8.6e-56 220.7 138 80.4
PGR042G0484 Punica granatum HOM05D004566 ORTHO05D006041 1.9e-55 219.5 138 80.4
Thecc.08G145200 Theobroma cacao HOM05D004566 ORTHO05D006041 3.3e-55 218.8 138 80.4
TAR381G1517 Trochodendron aralioides HOM05D004566 ORTHO05D006041 4.3e-55 218.4 136 81.6
Ciclev10000721m.g Citrus clementina HOM05D004566 ORTHO05D006041 5.6e-55 218.0 138 81.2
Potri.005G188000 Populus trichocarpa HOM05D004566 ORTHO05D006041 5.6e-55 218.0 138 81.2
GSVIVG01010038001 Vitis vinifera HOM05D004566 ORTHO05D006041 7.3e-55 217.6 138 80.4
arahy.Tifrunner.gnm1.ann1.9SPN5G Arachis hypogaea HOM05D004566 ORTHO05D006041 1.2e-54 216.9 138 81.2
arahy.Tifrunner.gnm1.ann1.FR9HZZ Arachis hypogaea HOM05D004566 ORTHO05D006041 1.2e-54 216.9 138 81.2
arahy.Tifrunner.gnm1.ann1.J7270J Arachis hypogaea HOM05D004566 ORTHO05D006041 1.2e-54 216.9 138 81.2
arahy.Tifrunner.gnm1.ann1.WMJ7PV Arachis hypogaea HOM05D004566 ORTHO05D006041 1.2e-54 216.9 138 81.2
Gohir.A02G108700 Gossypium hirsutum HOM05D004566 ORTHO05D006041 1.6e-54 216.5 138 79.7
VMungo1309G3090 Vigna mungo HOM05D004566 ORTHO05D006041 1.6e-54 216.5 138 79.7
Aqoxy6G02084 Aquilegia oxysepala HOM05D004566 ORTHO05D006041 2.1e-54 216.1 136 80.1
Potri.002G071600 Populus trichocarpa HOM05D004566 ORTHO05D006041 2.8e-54 215.7 138 79.7
Sabra05G0143600 Salix brachista HOM05D004566 ORTHO05D006041 2.8e-54 215.7 138 80.4
Phvul.009G135100 Phaseolus vulgaris HOM05D004566 ORTHO05D006041 3.6e-54 215.3 138 79.0
CiPaw.15G021200 Carya illinoinensis HOM05D004566 ORTHO05D006041 4.7e-54 214.9 138 79.7
Lalb_Chr11g0066451 Lupinus albus HOM05D004566 ORTHO05D006041 4.7e-54 214.9 138 79.7
Eucgr.F02736 Eucalyptus grandis HOM05D004566 ORTHO05D006041 8.0e-54 214.2 138 76.8
QL09p046738 Quercus lobata HOM05D004566 ORTHO05D006041 8.0e-54 214.2 138 79.0
QL09p046848 Quercus lobata HOM05D004566 ORTHO05D006041 8.0e-54 214.2 138 79.0
Ca_16654_v3 Cicer arietinum L. HOM05D004566 ORTHO05D006041 1.0e-53 213.8 138 77.5
TWI15G0549 Tripterygium wilfordii HOM05D004566 ORTHO05D006041 1.0e-53 213.8 137 81.8
TWI60G0810 Tripterygium wilfordii HOM05D004566 ORTHO05D006041 1.4e-53 213.4 138 80.4
Cfa018360 Carpinus fangiana HOM05D004566 ORTHO05D006041 1.8e-53 213.0 138 79.0
Haze_17715 Corylus avellana HOM05D004566 ORTHO05D006041 2.3e-53 212.6 138 78.3
Atru.chr13.1721 Acer truncatum HOM05D004566 ORTHO05D006041 3.0e-53 212.2 138 79.7
ClCG08G006480 Citrullus lanatus HOM05D004566 ORTHO05D006041 3.0e-53 212.2 138 79.0
MELO3C008406.2 Cucumis melo HOM05D004566 ORTHO05D006041 3.0e-53 212.2 138 79.0
Glyma.06G123000 Glycine max HOM05D004566 ORTHO05D006041 3.0e-53 212.2 138 79.7
Duzib041G0052 Durio zibethinus HOM05D004566 ORTHO05D006041 4.0e-53 211.8 138 79.0
Gohir.D03G061100 Gossypium hirsutum HOM05D004566 ORTHO05D006041 4.0e-53 211.8 138 78.3
Gorai.013G105000 Gossypium raimondii HOM05D004566 ORTHO05D006041 4.0e-53 211.8 138 78.3
Manes.18G088000 Manihot esculenta HOM05D004566 ORTHO05D006041 4.0e-53 211.8 138 79.7
Lsat_1_v5_gn_9_77820 Lactuca sativa HOM05D004566 ORTHO05D006041 5.2e-53 211.5 138 77.5
Glyma.04G240400 Glycine max HOM05D004566 ORTHO05D006041 6.8e-53 211.1 138 79.0
ECA232G5048 Erigeron canadensis HOM05D004566 ORTHO05D006041 2.0e-52 209.5 138 76.1
Psat7g096680 Pisum sativum HOM05D004566 ORTHO05D006041 2.0e-52 209.5 138 76.1
Medtr3g090170 Medicago truncatula HOM05D004566 ORTHO05D006041 2.6e-52 209.1 138 76.1
QL02p025237 Quercus lobata HOM05D004566 ORTHO05D006041 2.6e-52 209.1 138 77.5
HanXRQChr09g0275251 Helianthus annuus HOM05D004566 ORTHO05D006041 4.4e-52 208.4 138 76.1
Sed0000192 Sechium edule HOM05D004566 ORTHO05D006041 4.4e-52 208.4 138 76.8
CSS0027392 Camellia sinensis var. sinensis HOM05D004566 ORTHO05D006041 7.5e-52 207.6 138 76.8
Os02g0437800 Oryza sativa ssp. japonica HOM05D004566 ORTHO05D006041 7.5e-52 207.6 138 75.4
Solyc04g064820.3 Solanum lycopersicum HOM05D004566 ORTHO05D006041 7.5e-52 207.6 138 76.8
Sopen04g026780 Solanum pennellii HOM05D004566 ORTHO05D006041 7.5e-52 207.6 138 76.8
vmacro05453 Vaccinium macrocarpon HOM05D004566 ORTHO05D006041 7.5e-52 207.6 138 76.1
Nitab4.5_0000299g0160 Nicotiana tabacum HOM05D004566 ORTHO05D006041 9.8e-52 207.2 138 76.1
Nitab4.5_0010241g0020 Nicotiana tabacum HOM05D004566 ORTHO05D006041 9.8e-52 207.2 138 76.1
Hma1.2p1_0107F.1_g051470 Hydrangea macrophylla HOM05D004566 ORTHO05D006041 1.3e-51 206.8 138 76.8
Lalb_Chr23g0271371 Lupinus albus HOM05D004566 ORTHO05D006041 1.3e-51 206.8 138 77.5
CsaV3_6G030940 Cucumis sativus L. HOM05D004566 ORTHO05D006041 2.2e-51 206.1 138 76.1
CAN.G744.14 Capsicum annuum HOM05D004566 ORTHO05D006041 2.9e-51 205.7 138 76.1
Peaxi162Scf00263g00417 Petunia axillaris HOM05D004566 ORTHO05D006041 2.9e-51 205.7 138 76.1
RcHm_v2.0_Chr6g0277061 Rosa chinensis HOM05D004566 ORTHO05D006041 2.9e-51 205.7 138 76.1
CANSAT25G2177 Cannabis sativa HOM05D004566 ORTHO05D006041 3.7e-51 205.3 138 76.1
TPR.G18763 Trifolium pratense HOM05D004566 ORTHO05D006041 3.7e-51 205.3 138 73.9
THA.LOC104810036 Tarenaya hassleriana HOM05D004566 ORTHO05D006041 4.9e-51 204.9 138 77.5
Zm00001eb172280 Zea mays HOM05D004566 ORTHO05D006041 4.9e-51 204.9 138 74.6
Nn5g28636 Nelumbo nucifera HOM05D004566 ORTHO05D006041 6.4e-51 204.5 136 74.3
Lj4A692G26 Lonicera japonica HOM05D004566 ORTHO05D006041 8.3e-51 204.1 138 76.1
Cpa.g.sc49.56 Carica papaya HOM05D004566 ORTHO05D006041 1.4e-50 203.4 138 76.1
SGA_v2.0_scaffold19G08652 Striga asiatica HOM05D004566 ORTHO05D006041 1.4e-50 203.4 138 75.4
Rhsim02G0231500 Rhododendron simsii HOM05D004566 ORTHO05D006041 1.8e-50 203.0 138 73.2
Sp5g32320 Schrenkiella parvula HOM05D004566 ORTHO05D006041 1.8e-50 203.0 138 76.1
Ah.04g149960 Amaranthus hybridus HOM05D004566 ORTHO05D006041 2.4e-50 202.6 140 73.6
Sc02g0000500 Simmondsia chinensis HOM05D004566 ORTHO05D006041 2.4e-50 202.6 138 76.1
Actinidia15158 Actinidia chinensis HOM05D004566 ORTHO05D006041 3.2e-50 202.2 138 74.6
MD05G1016500 Malus domestica HOM05D004566 ORTHO05D006041 5.4e-50 201.4 138 76.8
Manes.02G175600 Manihot esculenta HOM05D004566 ORTHO05D006041 9.2e-50 200.7 138 76.1
Prupe.8G019800 Prunus persica HOM05D004566 ORTHO05D006041 9.2e-50 200.7 138 76.8
Aa31LG11G11410 Aethionema arabicum HOM05D004566 ORTHO05D006041 1.2e-49 200.3 138 75.4
AL2G37320 Arabidopsis lyrata HOM05D004566 ORTHO05D006041 1.2e-49 200.3 138 74.6
BcaB05g25023 Brassica carinata HOM05D004566 ORTHO05D006041 1.2e-49 200.3 138 74.6
Carub.0002s2403 Capsella rubella HOM05D004566 ORTHO05D006041 1.2e-49 200.3 138 74.6
CARHR070630 Cardamine hirsuta HOM05D004566 ORTHO05D006041 1.2e-49 200.3 138 74.6
AT1G77140 Arabidopsis thaliana HOM05D004566 ORTHO05D006041 1.6e-49 199.9 138 73.9
A02p21150 Brassica napus HOM05D004566 ORTHO05D006041 1.6e-49 199.9 138 73.9
C02p34300 Brassica napus HOM05D004566 ORTHO05D006041 1.6e-49 199.9 138 73.9
BolC2t09452H Brassica oleracea HOM05D004566 ORTHO05D006041 1.6e-49 199.9 138 73.9
BraA02t07132Z Brassica rapa HOM05D004566 ORTHO05D006041 1.6e-49 199.9 138 73.9
DCAR_023123 Daucus carota HOM05D004566 ORTHO05D006041 1.6e-49 199.9 144 70.1
SGA_v2.0_scaffold25G11162 Striga asiatica HOM05D004566 ORTHO05D006041 2.0e-49 199.5 138 74.6
Thhalv10018344m.g Eutrema salsugineum HOM05D004566 ORTHO05D006041 4.6e-49 198.4 138 73.9
EL10Ac5g10990 Beta vulgaris HOM05D004566 ORTHO05D006041 7.8e-49 197.6 138 73.2
BcaB02g07097 Brassica carinata HOM05D004566 ORTHO05D006041 7.8e-49 197.6 138 73.9
Oeu014477.2 Olea europaea HOM05D004566 ORTHO05D006041 1.3e-48 196.8 138 73.9
unitig_52.g17536 Utricularia gibba HOM05D004566 ORTHO05D006041 3.0e-48 195.7 138 71.7
MSTRG.24197 Avicennia marina HOM05D004566 ORTHO05D006041 3.9e-48 195.3 138 73.9
SalBow6G5540 Salvia bowleyana HOM05D004566 ORTHO05D006041 1.1e-47 193.7 138 71.0
Cc03_g13150 Coffea canephora HOM05D004566 ORTHO05D006041 1.5e-47 193.4 138 71.7
Migut.N03233 Erythranthe guttata HOM05D004566 ORTHO05D006041 1.9e-47 193.0 138 71.7
AUR62020958 Chenopodium quinoa HOM05D004566 ORTHO05D006041 9.5e-47 190.7 138 71.7
AUR62018460 Chenopodium quinoa HOM05D004566 ORTHO05D006041 3.6e-46 188.7 138 71.7
Pp3c18_21360 Physcomitrium patens HOM05D004566 ORTHO05D006041 3.1e-45 185.7 136 68.4
COL.COLO4_38311 Corchorus olitorius HOM05D004566 ORTHO05D006041 4.0e-45 185.3 129 73.6
Mapoly0133s0009 Marchantia polymorpha HOM05D004566 ORTHO05D006041 4.0e-45 185.3 136 69.1
COL.COLO4_03835 Corchorus olitorius HOM05D004566 ORTHO05D006041 6.8e-45 184.5 128 73.4
FAN15G1625 Fragaria x ananassa HOM05D004566 ORTHO05D006041 1.3e-43 180.3 139 70.5
FAN24G3481 Fragaria x ananassa HOM05D004566 ORTHO05D006041 1.3e-43 180.3 139 70.5
C06p31120 Brassica napus HOM05D004566 ORTHO05D006041 3.7e-43 178.7 123 72.4
BcaC08g45465 Brassica carinata HOM05D004566 ORTHO05D006041 1.4e-42 176.8 122 73.0
SMO118G0298 Selaginella moellendorffii HOM05D004566 ORTHO05D006041 2.4e-42 176.0 136 64.7
FvH4_2g14590 Fragaria vesca HOM05D004566 ORTHO05D006041 2.0e-41 172.9 124 75.0
AagrBONN_evm.TU.Sc2ySwM_344.5277 Anthoceros agrestis HOM05D004566 ORTHO05D006041 1.5e-39 166.8 142 55.6
BraA07t30433Z Brassica rapa HOM05D004566 ORTHO05D006041 1.9e-39 166.4 105 75.2
FAN20G3136 Fragaria x ananassa HOM05D004566 ORTHO05D006041 5.6e-39 164.9 170 57.6
FAN27G2999 Fragaria x ananassa HOM05D004566 ORTHO05D006041 1.2e-38 163.7 171 57.3
Dinv41118 Davidia involucrata HOM05D004566 ORTHO05D006041 2.1e-38 162.9 105 81.9
CiPaw.16G017400 Carya illinoinensis HOM05D004566 ORTHO05D006041 5.8e-36 154.8 102 81.4
MD10G1016000 Malus domestica HOM05D004566 ORTHO05D006041 6.2e-30 134.8 95 77.9
CBR_g40854 Chara braunii HOM05D004566 ORTHO05D006041 2.3e-29 132.9 105 58.1
PRCOL_00003824 Prasinoderma coloniale HOM05D004566 ORTHO05D006041 3.6e-22 109.0 139 43.9
BolC6t38256H Brassica oleracea HOM05D004566 ORTHO05D006041 4.7e-22 108.6 108 51.9
C06p30970 Brassica napus HOM05D004566 ORTHO05D006041 1.4e-18 97.1 113 51.3
AagrBONN_evm.TU.Sc2ySwM_344.3226 Anthoceros agrestis HOM05D004566 ORTHO05D006041 6.0e-17 91.7 75 54.7
BcaC08g45467 Brassica carinata HOM05D004566 ORTHO05D006041 7.8e-17 91.3 65 72.3
C06p31440 Brassica napus HOM05D004566 ORTHO05D006041 2.8e-14 82.8 80 58.8
SEGI_33438 Sequoiadendron giganteum HOM05D004566 ORTHO05D006041 3.6e-14 82.4 46 82.6
SHI09397 Sapria himalayana HOM05D004566 ORTHO05D035158 3.1e-13 79.3 97 55.7
Cre07.g333950 Chlamydomonas reinhardtii HOM05D004566 ORTHO05D006041 4.5e-12 75.5 115 41.7
COL.COLO4_38312 Corchorus olitorius HOM05D004566 ORTHO05D006041 2.9e-11 72.8 50 62.0
SHI09399 Sapria himalayana HOM05D004566 ORTHO05D006041 6.0e-09 65.1 44 61.4


User provided reference genes

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