Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE02G4152 Ceratophyllum demersum HOM05D005732 ORTHO05D007062 2.0e-113 412.5 219 100.0
MBI19_g26309_MAGBIO Magnolia biondii HOM05D005732 ORTHO05D007062 9.1e-34 147.9 213 36.6
CSS0032474 Camellia sinensis var. sinensis HOM05D005732 ORTHO05D007062 1.7e-32 143.7 206 40.8
CSS0002541 Camellia sinensis var. sinensis HOM05D005732 ORTHO05D007062 2.9e-32 142.9 206 40.8
Dinv37994 Davidia involucrata HOM05D005732 ORTHO05D007062 3.2e-31 139.4 215 38.6
DCAR_016197 Daucus carota HOM05D005732 ORTHO05D007062 4.2e-31 139.0 212 36.8
MBI04_g40322_MAGBIO Magnolia biondii HOM05D005732 ORTHO05D007062 4.2e-31 139.0 214 36.9
Nn2g11615 Nelumbo nucifera HOM05D005732 ORTHO05D007062 4.2e-31 139.0 214 39.3
MSTRG.11037 Avicennia marina HOM05D005732 ORTHO05D007062 5.5e-31 138.7 216 37.5
Phvul.010G146500 Phaseolus vulgaris HOM05D005732 ORTHO05D007062 5.5e-31 138.7 194 40.7
VMungo0331G0354 Vigna mungo HOM05D005732 ORTHO05D007062 5.5e-31 138.7 194 40.2
Actinidia09002 Actinidia chinensis HOM05D005732 ORTHO05D007062 7.2e-31 138.3 214 38.3
TAR383G0371 Trochodendron aralioides HOM05D005732 ORTHO05D007062 1.6e-30 137.1 216 38.0
MSTRG.22648 Avicennia marina HOM05D005732 ORTHO05D007062 2.1e-30 136.7 205 38.0
Manes.04G132400 Manihot esculenta HOM05D005732 ORTHO05D007062 3.6e-30 136.0 208 38.9
TAR626G0582 Trochodendron aralioides HOM05D005732 ORTHO05D007062 4.7e-30 135.6 214 37.9
SalBow1G6954 Salvia bowleyana HOM05D005732 ORTHO05D007062 6.1e-30 135.2 205 36.6
CSS0006657 Camellia sinensis var. sinensis HOM05D005732 ORTHO05D007062 1.0e-29 134.4 213 37.6
Migut.I00910 Erythranthe guttata HOM05D005732 ORTHO05D007062 1.0e-29 134.4 212 35.8
Potri.003G050400 Populus trichocarpa HOM05D005732 ORTHO05D007062 1.8e-29 133.7 213 35.2
SalBow2G2342 Salvia bowleyana HOM05D005732 ORTHO05D007062 2.3e-29 133.3 205 36.1
Lj5A55G45 Lonicera japonica HOM05D005732 ORTHO05D007062 3.0e-29 132.9 214 37.4
Oeu050609.1 Olea europaea HOM05D005732 ORTHO05D007062 4.0e-29 132.5 171 39.8
Haze_15828 Corylus avellana HOM05D005732 ORTHO05D007062 1.2e-28 131.0 170 42.4
Lj3g0008110 Lotus japonicus HOM05D005732 ORTHO05D007062 2.0e-28 130.2 194 38.7
Manes.11G035100 Manihot esculenta HOM05D005732 ORTHO05D007062 2.6e-28 129.8 207 36.2
Potri.001G188000 Populus trichocarpa HOM05D005732 ORTHO05D007062 2.6e-28 129.8 216 33.8
Cfa003665 Carpinus fangiana HOM05D005732 ORTHO05D007062 3.3e-28 129.4 170 42.4
CANSAT56G1056 Cannabis sativa HOM05D005732 ORTHO05D007062 4.4e-28 129.0 168 42.3
CiPaw.01G232900 Carya illinoinensis HOM05D005732 ORTHO05D007062 4.4e-28 129.0 211 37.4
Hma1.2p1_1689F.1_g297591 Hydrangea macrophylla HOM05D005732 ORTHO05D007062 5.7e-28 128.6 215 34.9
Cc04_g02710 Coffea canephora HOM05D005732 ORTHO05D007062 7.5e-28 128.3 218 38.1
PSO173G0088 Papaver somniferum HOM05D005732 ORTHO05D007062 1.3e-27 127.5 210 35.7
Glyma.07G017000 Glycine max HOM05D005732 ORTHO05D007062 1.7e-27 127.1 196 38.3
PGR102G2433 Punica granatum HOM05D005732 ORTHO05D007062 2.2e-27 126.7 170 40.0
Sabra03G0028400 Salix brachista HOM05D005732 ORTHO05D007062 2.8e-27 126.3 213 33.8
Lalb_Chr04g0262901 Lupinus albus HOM05D005732 ORTHO05D007062 3.7e-27 125.9 194 37.1
Hund06653 Selenicereus undatus HOM05D005732 ORTHO05D007062 3.7e-27 125.9 162 40.1
PSO832G1217 Papaver somniferum HOM05D005732 ORTHO05D007062 8.2e-27 124.8 213 35.2
TWI75G0681 Tripterygium wilfordii HOM05D005732 ORTHO05D007062 1.4e-26 124.0 169 38.5
arahy.Tifrunner.gnm1.ann1.U1FWF5 Arachis hypogaea HOM05D005732 ORTHO05D007062 1.8e-26 123.6 192 37.0
arahy.Tifrunner.gnm1.ann1.Z2G3LM Arachis hypogaea HOM05D005732 ORTHO05D007062 1.8e-26 123.6 192 37.0
Psat4g197440 Pisum sativum HOM05D005732 ORTHO05D007062 1.8e-26 123.6 172 38.4
Eucgr.F03064 Eucalyptus grandis HOM05D005732 ORTHO05D007062 2.4e-26 123.2 207 35.3
vmacro16985 Vaccinium macrocarpon HOM05D005732 ORTHO05D007062 2.4e-26 123.2 208 35.6
ECA247G0174 Erigeron canadensis HOM05D005732 ORTHO05D007062 3.1e-26 122.9 158 41.1
AUR62022181 Chenopodium quinoa HOM05D005732 ORTHO05D007062 4.1e-26 122.5 162 39.5
Sc15g0001950 Simmondsia chinensis HOM05D005732 ORTHO05D007062 4.1e-26 122.5 156 42.3
Sabra01G0152800 Salix brachista HOM05D005732 ORTHO05D007062 9.1e-26 121.3 232 33.2
FvH4_6g32160 Fragaria vesca HOM05D005732 ORTHO05D007062 1.2e-25 120.9 208 36.1
TWI18G0404 Tripterygium wilfordii HOM05D005732 ORTHO05D007062 1.2e-25 120.9 199 34.7
FAN14G0018 Fragaria x ananassa HOM05D005732 ORTHO05D007062 2.0e-25 120.2 208 35.6
AUR62031884 Chenopodium quinoa HOM05D005732 ORTHO05D007062 3.5e-25 119.4 162 38.9
EL10Ac9g22102 Beta vulgaris HOM05D005732 ORTHO05D007062 7.7e-25 118.2 162 38.3
Os01g0725400 Oryza sativa ssp. japonica HOM05D005732 ORTHO05D007062 7.7e-25 118.2 155 41.3
MD09G1205900 Malus domestica HOM05D005732 ORTHO05D007062 1.0e-24 117.9 189 36.5
Atru.chr1.3497 Acer truncatum HOM05D005732 ORTHO05D007062 1.3e-24 117.5 155 40.6
Medtr8g013900 Medicago truncatula HOM05D005732 ORTHO05D007062 1.3e-24 117.5 184 35.9
AL3G29050 Arabidopsis lyrata HOM05D005732 ORTHO05D007062 1.7e-24 117.1 207 34.8
Lj9A511T51 Lonicera japonica HOM05D005732 ORTHO05D007062 2.2e-24 116.7 251 32.7
HanXRQChr02g0032191 Helianthus annuus HOM05D005732 ORTHO05D007062 3.8e-24 115.9 165 37.0
unitig_46.g18459 Utricularia gibba HOM05D005732 ORTHO05D007062 5.0e-24 115.5 168 39.3
FAN02G4216 Fragaria x ananassa HOM05D005732 ORTHO05D007062 6.5e-24 115.2 207 34.3
Carub.0003s1605 Capsella rubella HOM05D005732 ORTHO05D007062 1.1e-23 114.4 207 34.3
Aqoxy7G01470 Aquilegia oxysepala HOM05D005732 ORTHO05D007062 1.5e-23 114.0 222 32.0
RcHm_v2.0_Chr2g0140051 Rosa chinensis HOM05D005732 ORTHO05D007062 1.5e-23 114.0 162 36.4
FAN05G5290 Fragaria x ananassa HOM05D005732 ORTHO05D007062 1.9e-23 113.6 207 33.8
Sed0001710 Sechium edule HOM05D005732 ORTHO05D007062 3.2e-23 112.8 156 39.1
BcaB06g25723 Brassica carinata HOM05D005732 ORTHO05D007062 4.2e-23 112.5 198 33.8
Ciclev10026574m.g Citrus clementina HOM05D005732 ORTHO05D007062 7.2e-23 111.7 183 35.5
Lsat_1_v5_gn_1_34600 Lactuca sativa HOM05D005732 ORTHO05D007062 7.2e-23 111.7 194 34.5
C05p50190 Brassica napus HOM05D004877 ORTHO05D005942 9.4e-23 111.3 202 36.1
BolC5t33769H Brassica oleracea HOM05D004877 ORTHO05D005942 9.4e-23 111.3 202 36.1
Prupe.3G061300 Prunus persica HOM05D005732 ORTHO05D007062 9.4e-23 111.3 165 36.4
BcaC05g28895 Brassica carinata HOM05D005732 ORTHO05D007062 1.2e-22 110.9 166 38.0
Peaxi162Scf00038g00842 Petunia axillaris HOM05D005732 ORTHO05D007062 1.2e-22 110.9 210 34.3
CiPaw.02G147000 Carya illinoinensis HOM05D005732 ORTHO05D007062 1.6e-22 110.5 201 33.8
GSVIVG01017014001 Vitis vinifera HOM05D005732 ORTHO05D007062 2.1e-22 110.2 147 40.8
CsaV3_7G035420 Cucumis sativus L. HOM05D005732 ORTHO05D007062 2.7e-22 109.8 197 34.5
PGSC0003DMG400002535 Solanum tuberosum HOM05D005732 ORTHO05D007062 2.7e-22 109.8 206 34.0
Lsat_1_v5_gn_4_99921 Lactuca sativa HOM05D005732 ORTHO05D007062 3.6e-22 109.4 171 33.9
Gohir.A02G118700 Gossypium hirsutum HOM05D005732 ORTHO05D007062 4.7e-22 109.0 199 34.2
Sopen03g039690 Solanum pennellii HOM05D005732 ORTHO05D007062 4.7e-22 109.0 203 33.0
BraA05t22147Z Brassica rapa HOM05D005732 ORTHO05D007062 6.1e-22 108.6 166 37.3
Solyc03g120870.3 Solanum lycopersicum HOM05D005732 ORTHO05D007062 6.1e-22 108.6 203 32.5
AT3G16300 Arabidopsis thaliana HOM05D005732 ORTHO05D007062 8.0e-22 108.2 169 36.1
FAN09G2308 Fragaria x ananassa HOM05D005732 ORTHO05D007062 1.4e-21 107.5 161 35.4
Thecc.06G097400 Theobroma cacao HOM05D005732 ORTHO05D007062 1.8e-21 107.1 203 32.0
CARHR091510 Cardamine hirsuta HOM05D005732 ORTHO05D007062 2.3e-21 106.7 194 33.5
Thhalv10021518m.g Eutrema salsugineum HOM05D005732 ORTHO05D007062 2.3e-21 106.7 166 35.5
TPR.G35018 Trifolium pratense HOM05D005732 ORTHO05D007062 2.3e-21 106.7 168 37.5
MELO3C024451.2 Cucumis melo HOM05D005732 ORTHO05D007062 3.0e-21 106.3 197 33.5
Sp3g14670 Schrenkiella parvula HOM05D005732 ORTHO05D007062 3.0e-21 106.3 166 34.9
HanXRQChr09g0275891 Helianthus annuus HOM05D005732 ORTHO05D007062 4.0e-21 105.9 165 32.7
COL.COLO4_30485 Corchorus olitorius HOM05D000181 ORTHO05D008575 5.2e-21 105.5 196 31.6
DCAR_026348 Daucus carota HOM05D005732 ORTHO05D007062 5.2e-21 105.5 163 34.4
Cpa.g.c29422 Carica papaya HOM05D005732 ORTHO05D007062 6.8e-21 105.1 174 35.6
THA.LOC104817966 Tarenaya hassleriana HOM05D005732 ORTHO05D007062 6.8e-21 105.1 165 33.9
C06p28700 Brassica napus HOM05D005732 ORTHO05D007062 8.8e-21 104.8 168 34.5
HanXRQChr16g0501231 Helianthus annuus HOM05D005732 ORTHO05D007062 1.5e-20 104.0 162 34.0
A07p26310 Brassica napus HOM05D005732 ORTHO05D007062 2.0e-20 103.6 165 34.5
BraA07t30275Z Brassica rapa HOM05D005732 ORTHO05D007062 2.0e-20 103.6 165 34.5
Gorai.003G063300 Gossypium raimondii HOM05D005732 ORTHO05D007062 4.4e-20 102.4 196 33.2
Aa31LG8G3450 Aethionema arabicum HOM05D004877 ORTHO05D005942 7.5e-20 101.7 164 34.8
AT1G79780 Arabidopsis thaliana HOM05D005732 ORTHO05D007062 7.5e-20 101.7 184 33.2
Carub.0002s2773 Capsella rubella HOM05D005732 ORTHO05D007062 7.5e-20 101.7 170 34.1
AL2G41770 Arabidopsis lyrata HOM05D005732 ORTHO05D007062 9.8e-20 101.3 170 34.1
Duzib192G0605 Durio zibethinus HOM05D005732 ORTHO05D007062 9.8e-20 101.3 166 33.7
QL05p020542 Quercus lobata HOM05D005732 ORTHO05D007062 1.3e-19 100.9 215 31.2
Sp5g35990 Schrenkiella parvula HOM05D005732 ORTHO05D007062 1.7e-19 100.5 167 34.1
BcaB04g18894 Brassica carinata HOM05D005732 ORTHO05D007062 2.2e-19 100.1 166 34.3
BolC6t38039H Brassica oleracea HOM05D005732 ORTHO05D007062 2.2e-19 100.1 167 33.5
BolC3t17024H Brassica oleracea HOM05D005732 ORTHO05D007062 2.8e-19 99.8 166 34.3
ECA232G1272 Erigeron canadensis HOM05D000181 ORTHO05D008575 2.8e-19 99.8 166 33.7
BcaC01g03830 Brassica carinata HOM05D005732 ORTHO05D007062 4.8e-19 99.0 166 33.7
BolC3t17097H Brassica oleracea HOM05D005732 ORTHO05D007062 4.8e-19 99.0 166 33.7
C03p48190 Brassica napus HOM05D005732 ORTHO05D007062 8.3e-19 98.2 165 33.9
THA.LOC104813551 Tarenaya hassleriana HOM05D005732 ORTHO05D007062 8.3e-19 98.2 141 35.5
BraA03t13125Z Brassica rapa HOM05D005732 ORTHO05D007062 2.4e-18 96.7 166 33.1
Duzib160G0019 Durio zibethinus HOM05D005732 ORTHO05D007062 5.4e-18 95.5 166 34.9
A03p39750 Brassica napus HOM05D005732 ORTHO05D007062 7.0e-18 95.1 166 33.1
Ca_23241_v3 Cicer arietinum L. HOM05D005732 ORTHO05D007062 9.1e-18 94.7 194 33.0
Gohir.D03G059300 Gossypium hirsutum HOM05D005732 ORTHO05D007062 9.1e-18 94.7 196 31.6
Lj9C524T15 Lonicera japonica HOM05D005732 ORTHO05D007062 1.2e-17 94.4 217 31.3
Aa31LG4G50 Aethionema arabicum HOM05D005732 ORTHO05D007062 3.5e-17 92.8 181 30.4
Thhalv10019180m.g Eutrema salsugineum HOM05D005732 ORTHO05D007062 3.5e-17 92.8 165 32.7
Rhsim12G0202300 Rhododendron simsii HOM05D005732 ORTHO05D007062 4.7e-14 82.4 203 30.0
vmacro17018 Vaccinium macrocarpon HOM05D005732 ORTHO05D007062 4.7e-14 82.4 153 37.3
SGA_v2.0_scaffold69G23330 Striga asiatica HOM05D004877 ORTHO05D005942 3.0e-13 79.7 111 39.6
Dinv30452 Davidia involucrata HOM05D005732 ORTHO05D007062 5.2e-13 79.0 120 40.8
MBI04_g44953_MAGBIO Magnolia biondii HOM05D005732 ORTHO05D007062 8.8e-13 78.2 112 38.4
ATR0705G122 Amborella trichopoda HOM05D005732 ORTHO05D007062 4.1e-10 69.3 115 34.8
Prupe.3G065500 Prunus persica HOM05D005732 ORTHO05D007062 7.0e-10 68.6 111 36.9
Medtr2g026530 Medicago truncatula HOM05D002232 ORTHO05D002323 2.9e-08 63.2 178 29.2
Potri.008G205000 Populus trichocarpa HOM05D001151 ORTHO05D001504 1.9e-07 60.5 191 27.7
CARHR130000 Cardamine hirsuta HOM05D002232 ORTHO05D002323 5.6e-07 58.9 175 28.0
Dinv25627 Davidia involucrata HOM05D003184 ORTHO05D000394 5.6e-07 58.9 143 32.2
Psat1g173800 Pisum sativum HOM05D002232 ORTHO05D002323 9.5e-07 58.2 178 29.8
Rhsim10G0002700 Rhododendron simsii HOM05D003184 ORTHO05D000394 9.5e-07 58.2 165 29.1
Manes.04G090520 Manihot esculenta HOM05D003184 ORTHO05D000394 2.8e-06 56.6 143 29.4
CANSAT56G1351 Cannabis sativa HOM05D002232 ORTHO05D002323 3.6e-06 56.2 178 27.0
Haze_06978 Corylus avellana HOM05D002232 ORTHO05D002323 4.7e-06 55.8 178 27.0
PSO017G3715 Papaver somniferum HOM05D003184 ORTHO05D000394 4.7e-06 55.8 165 29.7
Potri.006G016900 Populus trichocarpa HOM05D002232 ORTHO05D002323 4.7e-06 55.8 178 27.0
Sp4g18010 Schrenkiella parvula HOM05D002232 ORTHO05D002323 4.7e-06 55.8 191 27.7
TPR.G10562 Trifolium pratense HOM05D002232 ORTHO05D002323 4.7e-06 55.8 178 28.7
MD00G1058300 Malus domestica HOM05D002232 ORTHO05D002323 6.1e-06 55.5 175 28.6
Oeu052855.1 Olea europaea HOM05D002232 ORTHO05D002323 6.1e-06 55.5 186 27.4
Oeu052867.1 Olea europaea HOM05D002232 ORTHO05D002323 6.1e-06 55.5 186 27.4


User provided reference genes

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