Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE02G4069 Ceratophyllum demersum HOM05D006453 ORTHO05D008280 2.3e-138 496.1 372 100.0
CDE04G0989 Ceratophyllum demersum HOM05D006453 ORTHO05D008280 2.9e-96 356.3 341 65.7
TAR633G1955 Trochodendron aralioides HOM05D006453 ORTHO05D008280 1.4e-42 177.9 147 66.7
TAR636G0230 Trochodendron aralioides HOM05D006453 ORTHO05D008280 3.4e-41 173.3 198 56.1
Aqoxy7G02016 Aquilegia oxysepala HOM05D006453 ORTHO05D008280 4.2e-39 166.4 130 67.7
GSVIVG01029939001 Vitis vinifera HOM05D006453 ORTHO05D008280 7.2e-39 165.6 98 85.7
Os01g0815700 Oryza sativa ssp. japonica HOM05D006453 ORTHO05D008280 2.1e-38 164.1 103 81.6
MBI19_g44505_MAGBIO Magnolia biondii HOM05D006453 ORTHO05D008280 6.1e-38 162.5 92 89.1
HPP92_017897 Vanilla planifolia HOM05D006453 ORTHO05D008280 7.9e-38 162.2 166 59.0
CAN.G595.6 Capsicum annuum HOM05D006453 ORTHO05D008280 1.0e-37 161.8 98 84.7
Phvul.001G107100 Phaseolus vulgaris HOM05D006453 ORTHO05D008280 1.3e-37 161.4 154 62.3
Zm00001eb369080 Zea mays HOM05D006453 ORTHO05D008280 1.3e-37 161.4 148 63.5
Lj2C416G9 Lonicera japonica HOM05D006453 ORTHO05D008280 1.8e-37 161.0 191 52.9
Zm00001eb149830 Zea mays HOM05D006453 ORTHO05D008280 3.0e-37 160.2 117 71.8
MD14G1010700 Malus domestica HOM05D006453 ORTHO05D008280 3.9e-37 159.8 179 54.7
Nitab4.5_0001330g0010 Nicotiana tabacum HOM05D006453 ORTHO05D008280 3.9e-37 159.8 99 82.8
Duzib177G0835 Durio zibethinus HOM05D006453 ORTHO05D008280 5.1e-37 159.5 144 64.6
VMungo1383G3098 Vigna mungo HOM05D006453 ORTHO05D008280 5.1e-37 159.5 154 62.3
Atru.chr2.1559 Acer truncatum HOM05D006453 ORTHO05D008280 6.7e-37 159.1 105 81.0
arahy.Tifrunner.gnm1.ann1.5FGX2C Arachis hypogaea HOM05D006453 ORTHO05D008280 8.7e-37 158.7 138 67.4
Haze_20390 Corylus avellana HOM05D006453 ORTHO05D008280 1.1e-36 158.3 180 55.6
TWI32G1104 Tripterygium wilfordii HOM05D006453 ORTHO05D008280 1.1e-36 158.3 154 59.7
vmacro07642 Vaccinium macrocarpon HOM05D006453 ORTHO05D008280 1.1e-36 158.3 207 50.2
Cfa019867 Carpinus fangiana HOM05D006453 ORTHO05D008280 1.5e-36 157.9 140 65.0
Oeu044203.1 Olea europaea HOM05D006453 ORTHO05D008280 1.9e-36 157.5 91 87.9
CiPaw.09G165800 Carya illinoinensis HOM05D006453 ORTHO05D008280 2.5e-36 157.1 127 69.3
MELO3C009680.2 Cucumis melo HOM05D006453 ORTHO05D008280 2.5e-36 157.1 178 53.9
Lalb_Chr22g0358481 Lupinus albus HOM05D006453 ORTHO05D008280 2.5e-36 157.1 193 54.9
MD12G1012900 Malus domestica HOM05D006453 ORTHO05D008280 2.5e-36 157.1 199 49.2
DCAR_020643 Daucus carota HOM05D006453 ORTHO05D008280 3.3e-36 156.8 200 52.5
Thecc.05G240300 Theobroma cacao HOM05D006453 ORTHO05D008280 3.3e-36 156.8 149 64.4
Rhsim03G0046400 Rhododendron simsii HOM05D006453 ORTHO05D008280 4.3e-36 156.4 206 50.0
Actinidia37830 Actinidia chinensis HOM05D006453 ORTHO05D008280 5.7e-36 156.0 141 64.5
MSTRG.6251 Avicennia marina HOM05D006453 ORTHO05D008280 5.7e-36 156.0 99 80.8
Gohir.D08G237400 Gossypium hirsutum HOM05D006453 ORTHO05D008280 5.7e-36 156.0 170 57.1
Sopen01g023080 Solanum pennellii HOM05D006453 ORTHO05D008280 5.7e-36 156.0 98 81.6
PGSC0003DMG400010935 Solanum tuberosum HOM05D006453 ORTHO05D008280 5.7e-36 156.0 98 81.6
Migut.K00219 Erythranthe guttata HOM05D006453 ORTHO05D008280 7.4e-36 155.6 99 80.8
Gohir.A08G220800 Gossypium hirsutum HOM05D006453 ORTHO05D008280 7.4e-36 155.6 140 62.9
PGR042G0732 Punica granatum HOM05D006453 ORTHO05D008280 7.4e-36 155.6 169 58.0
CSS0021093 Camellia sinensis var. sinensis HOM05D006453 ORTHO05D008280 9.7e-36 155.2 188 53.7
Cpa.g.sc73.5 Carica papaya HOM05D006453 ORTHO05D008280 9.7e-36 155.2 156 60.9
arahy.Tifrunner.gnm1.ann1.I1EK11 Arachis hypogaea HOM05D006453 ORTHO05D008280 1.3e-35 154.8 138 66.7
CSS0043580 Camellia sinensis var. sinensis HOM05D006453 ORTHO05D008280 1.3e-35 154.8 188 52.7
HanXRQChr03g0076821 Helianthus annuus HOM05D006453 ORTHO05D008280 1.3e-35 154.8 98 80.6
Eucgr.K02987 Eucalyptus grandis HOM05D006453 ORTHO05D008280 1.7e-35 154.5 193 50.8
ClCG10G017040 Citrullus lanatus HOM05D006453 ORTHO05D008280 2.8e-35 153.7 189 50.3
COL.COLO4_20073 Corchorus olitorius HOM05D006453 ORTHO05D008280 3.7e-35 153.3 176 56.8
Manes.08G151700 Manihot esculenta HOM05D006453 ORTHO05D008280 3.7e-35 153.3 106 75.5
Psat3g085600 Pisum sativum HOM05D006453 ORTHO05D008280 3.7e-35 153.3 134 65.7
Sed0009752 Sechium edule HOM05D006453 ORTHO05D008280 3.7e-35 153.3 153 62.1
AUR62037057 Chenopodium quinoa HOM05D006453 ORTHO05D008280 6.3e-35 152.5 115 71.3
Gorai.004G252900 Gossypium raimondii HOM05D006453 ORTHO05D008280 6.3e-35 152.5 170 56.5
Sabra13G0058600 Salix brachista HOM05D006453 ORTHO05D008280 6.3e-35 152.5 95 84.2
Ca_03446_v3 Cicer arietinum L. HOM05D006453 ORTHO05D008280 8.2e-35 152.1 170 55.9
Ciclev10030654m.g Citrus clementina HOM05D006453 ORTHO05D008280 8.2e-35 152.1 106 78.3
PSO541G6198 Papaver somniferum HOM05D006453 ORTHO05D008280 8.2e-35 152.1 197 50.8
Solyc01g057780.3 Solanum lycopersicum HOM05D006453 ORTHO05D008280 8.2e-35 152.1 98 80.6
CsaV3_3G039350 Cucumis sativus L. HOM05D006453 ORTHO05D008280 1.1e-34 151.8 189 50.8
QL07p016723 Quercus lobata HOM05D006453 ORTHO05D008280 1.1e-34 151.8 138 65.2
ATR0068G066 Amborella trichopoda HOM05D006453 ORTHO05D008280 1.4e-34 151.4 84 85.7
Medtr7g087047 Medicago truncatula HOM05D006453 ORTHO05D008280 1.4e-34 151.4 192 52.6
TPR.G7838 Trifolium pratense HOM05D006453 ORTHO05D008280 1.4e-34 151.4 159 60.4
ECA240G3357 Erigeron canadensis HOM05D006453 ORTHO05D008280 1.8e-34 151.0 104 76.9
Glyma.19G118900 Glycine max HOM05D006453 ORTHO05D008280 2.4e-34 150.6 175 54.9
AUR62036516 Chenopodium quinoa HOM05D006453 ORTHO05D008280 3.1e-34 150.2 115 70.4
Eucgr.A02151 Eucalyptus grandis HOM05D006453 ORTHO05D008280 3.1e-34 150.2 193 51.3
FvH4_2g05470 Fragaria vesca HOM05D006453 ORTHO05D008280 3.1e-34 150.2 205 50.2
ECA246G3617 Erigeron canadensis HOM05D006453 ORTHO05D008280 4.1e-34 149.8 98 79.6
Ah.02g116050 Amaranthus hybridus HOM05D006453 ORTHO05D008280 6.9e-34 149.1 116 70.7
Glyma.03G007200 Glycine max HOM05D006453 ORTHO05D008280 6.9e-34 149.1 178 53.9
Prupe.7G017200 Prunus persica HOM05D006453 ORTHO05D008280 1.5e-33 147.9 188 52.7
CDE04G2250 Ceratophyllum demersum HOM05D006453 ORTHO05D008280 2.6e-33 147.1 172 56.4
FAN15G3048 Fragaria x ananassa HOM05D006453 ORTHO05D008280 4.5e-33 146.4 206 48.1
Lj1g0022011 Lotus japonicus HOM05D006453 ORTHO05D008280 4.5e-33 146.4 130 62.3
Nitab4.5_0022362g0010 Nicotiana tabacum HOM05D006453 ORTHO05D008280 4.5e-33 146.4 150 60.0
PSO675G7297 Papaver somniferum HOM05D006453 ORTHO05D008280 4.5e-33 146.4 197 50.3
Potri.013G067200 Populus trichocarpa HOM05D006453 ORTHO05D008280 4.5e-33 146.4 169 54.4
RcHm_v2.0_Chr3g0495901 Rosa chinensis HOM05D006453 ORTHO05D008280 4.5e-33 146.4 208 49.5
Peaxi162Scf00563g00316 Petunia axillaris HOM05D006453 ORTHO05D008280 7.7e-33 145.6 144 63.2
SalBow1G7395 Salvia bowleyana HOM05D006453 ORTHO05D008280 1.7e-32 144.4 136 61.0
unitig_37.g12689 Utricularia gibba HOM05D006453 ORTHO05D008280 1.7e-32 144.4 96 77.1
HanXRQChr08g0233621 Helianthus annuus HOM05D006453 ORTHO05D008280 2.5e-31 140.6 124 63.7
EL10Ac5g11680 Beta vulgaris HOM05D006453 ORTHO05D008280 4.2e-31 139.8 181 49.7
Lsat_1_v5_gn_9_93321 Lactuca sativa HOM05D006453 ORTHO05D008280 5.5e-31 139.4 175 54.3
SGA_v2.0_scaffold12G06081 Striga asiatica HOM05D006453 ORTHO05D008280 5.5e-31 139.4 167 53.9
Sc07g0007630 Simmondsia chinensis HOM05D006453 ORTHO05D008280 7.2e-31 139.0 159 53.5
Hund15183 Selenicereus undatus HOM05D006453 ORTHO05D008280 2.1e-30 137.5 188 47.9
THA.LOC104820798 Tarenaya hassleriana HOM05D006453 ORTHO05D008280 2.7e-30 137.1 170 54.1
CARHR195380 Cardamine hirsuta HOM05D006453 ORTHO05D008280 7.9e-30 135.6 88 79.5
Lsat_1_v5_gn_5_2441 Lactuca sativa HOM05D006453 ORTHO05D008280 7.9e-30 135.6 84 83.3
BcaB08g36744 Brassica carinata HOM05D006453 ORTHO05D008280 1.4e-29 134.8 89 76.4
BraA10t44228Z Brassica rapa HOM05D006453 ORTHO05D008280 1.8e-29 134.4 89 75.3
A03p08490 Brassica napus HOM05D006453 ORTHO05D008280 5.1e-29 132.9 87 77.0
BraA03t10172Z Brassica rapa HOM05D006453 ORTHO05D008280 5.1e-29 132.9 87 77.0
Sp6g26460 Schrenkiella parvula HOM05D006453 ORTHO05D008280 1.5e-28 131.3 103 68.0
BcaB01g05155 Brassica carinata HOM05D006453 ORTHO05D008280 2.0e-28 131.0 86 76.7
C03p09890 Brassica napus HOM05D006453 ORTHO05D008280 2.0e-28 131.0 86 76.7
BolC3t13477H Brassica oleracea HOM05D006453 ORTHO05D008280 2.0e-28 131.0 86 76.7
A10p21660 Brassica napus HOM05D006453 ORTHO05D008280 3.3e-28 130.2 84 79.8
C09p59360 Brassica napus HOM05D006453 ORTHO05D008280 3.3e-28 130.2 89 74.2
BolC9t58775H Brassica oleracea HOM05D006453 ORTHO05D008280 3.3e-28 130.2 89 74.2
Thhalv10012756m.g Eutrema salsugineum HOM05D006453 ORTHO05D008280 3.3e-28 130.2 115 63.5
Aa31LG11G11790 Aethionema arabicum HOM05D006453 ORTHO05D008280 7.4e-28 129.0 97 71.1
BcaB01g04912 Brassica carinata HOM05D006453 ORTHO05D008280 6.3e-27 125.9 119 61.3
AL6G28880 Arabidopsis lyrata HOM05D006453 ORTHO05D008280 1.4e-26 124.8 188 47.9
AT5G17790 Arabidopsis thaliana HOM05D006453 ORTHO05D008280 6.9e-26 122.5 118 60.2
Carub.0006s1602 Capsella rubella HOM05D006453 ORTHO05D008280 6.9e-26 122.5 112 62.5
Aa31LG2G1800 Aethionema arabicum HOM05D006453 ORTHO05D008280 5.9e-25 119.4 135 52.6
THA.LOC104798844 Tarenaya hassleriana HOM05D006453 ORTHO05D008280 1.4e-23 114.8 138 49.3
Dinv14566 Davidia involucrata HOM05D001832 ORTHO05D001861 3.2e-23 113.6 174 48.9
Dinv37027 Davidia involucrata HOM05D006453 ORTHO05D008280 4.2e-23 113.2 121 58.7
SHI14865 Sapria himalayana HOM05D006453 ORTHO05D008280 5.7e-20 102.8 104 53.8
FAN27G0370 Fragaria x ananassa HOM05D006453 ORTHO05D008280 2.5e-15 87.4 66 60.6
Nn3g20153 Nelumbo nucifera HOM05D006453 ORTHO05D008280 1.2e-14 85.1 64 64.1
Dinv14567 Davidia involucrata HOM05D006453 ORTHO05D008280 2.0e-12 77.8 96 45.8
Cc06_g21620 Coffea canephora HOM05D006453 ORTHO05D008280 2.2e-11 74.3 69 60.9


User provided reference genes

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