Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE02G3683 Ceratophyllum demersum HOM05D006605 ORTHO05D008277 2.6e-42 175.6 139 100.0
CDE09G0303 Ceratophyllum demersum HOM05D006605 ORTHO05D008277 2.1e-12 76.3 210 53.3
Cpa.g.sc19.283 Carica papaya HOM05D006605 ORTHO05D008277 3.4e-10 68.9 37 86.5
Hund13792 Selenicereus undatus HOM05D006605 ORTHO05D008277 5.8e-10 68.2 37 83.8
Cc02_g07470 Coffea canephora HOM05D006605 ORTHO05D008277 7.6e-10 67.8 37 83.8
Eucgr.G02956 Eucalyptus grandis HOM05D006605 ORTHO05D008277 7.6e-10 67.8 37 83.8
Manes.07G118800 Manihot esculenta HOM05D006605 ORTHO05D008277 7.6e-10 67.8 37 83.8
Nn2g13462 Nelumbo nucifera HOM05D006605 ORTHO05D008277 7.6e-10 67.8 37 83.8
unitig_747.g21792 Utricularia gibba HOM05D006605 ORTHO05D008277 7.6e-10 67.8 37 83.8
ClCG11G006700 Citrullus lanatus HOM05D006605 ORTHO05D008277 9.9e-10 67.4 37 83.8
MELO3C008233.2 Cucumis melo HOM05D006605 ORTHO05D008277 9.9e-10 67.4 37 83.8
CsaV3_6G001320 Cucumis sativus L. HOM05D006605 ORTHO05D008277 9.9e-10 67.4 37 83.8
Dinv06756 Davidia involucrata HOM05D006605 ORTHO05D008277 9.9e-10 67.4 37 81.1
Glyma.18G035300 Glycine max HOM05D006605 ORTHO05D008277 9.9e-10 67.4 37 83.8
Potri.010G200000 Populus trichocarpa HOM05D006605 ORTHO05D008277 9.9e-10 67.4 37 83.8
Sed0013536 Sechium edule HOM05D006605 ORTHO05D008277 9.9e-10 67.4 37 83.8
GSVIVG01016495001 Vitis vinifera HOM05D006605 ORTHO05D008277 9.9e-10 67.4 37 83.8
Actinidia02925 Actinidia chinensis HOM05D006605 ORTHO05D008277 1.3e-09 67.0 37 83.8
ATR0559G079 Amborella trichopoda HOM05D006605 ORTHO05D008277 1.3e-09 67.0 37 83.8
Migut.F00754 Erythranthe guttata HOM05D006605 ORTHO05D008277 1.3e-09 67.0 37 81.1
arahy.Tifrunner.gnm1.ann1.SDQ61V Arachis hypogaea HOM05D006605 ORTHO05D008277 1.7e-09 66.6 37 81.1
arahy.Tifrunner.gnm1.ann1.SV7RC5 Arachis hypogaea HOM05D006605 ORTHO05D008277 1.7e-09 66.6 37 81.1
MSTRG.27369 Avicennia marina HOM05D006605 ORTHO05D008277 1.7e-09 66.6 37 81.1
COL.COLO4_25481 Corchorus olitorius HOM05D006605 ORTHO05D008277 1.7e-09 66.6 37 81.1
Duzib106G0051 Durio zibethinus HOM05D006605 ORTHO05D008277 1.7e-09 66.6 37 81.1
Gohir.D10G234300 Gossypium hirsutum HOM05D006605 ORTHO05D008277 1.7e-09 66.6 37 81.1
CAN.G394.84 Capsicum annuum HOM05D006605 ORTHO05D008277 2.2e-09 66.2 37 81.1
CiPaw.02G186200 Carya illinoinensis HOM05D006605 ORTHO05D008277 2.2e-09 66.2 37 81.1
AUR62012132 Chenopodium quinoa HOM05D006605 ORTHO05D008277 2.2e-09 66.2 37 81.1
AUR62040704 Chenopodium quinoa HOM05D006605 ORTHO05D008277 2.2e-09 66.2 37 81.1
Glyma.11G222100 Glycine max HOM05D006605 ORTHO05D008277 2.2e-09 66.2 37 81.1
Gorai.011G267900 Gossypium raimondii HOM05D006605 ORTHO05D008277 2.2e-09 66.2 37 78.4
Phvul.001G235600 Phaseolus vulgaris HOM05D006605 ORTHO05D008277 2.2e-09 66.2 37 81.1
PGR142G0607 Punica granatum HOM05D006605 ORTHO05D008277 2.2e-09 66.2 37 81.1
THA.LOC104810044 Tarenaya hassleriana HOM05D006605 ORTHO05D008277 2.2e-09 66.2 37 78.4
VMungo1383G1515 Vigna mungo HOM05D006605 ORTHO05D008277 2.2e-09 66.2 37 81.1
Aa31LG1G26470 Aethionema arabicum HOM05D006605 ORTHO05D008277 2.9e-09 65.9 37 75.7
Ah.16g102590 Amaranthus hybridus HOM05D006605 ORTHO05D008277 2.9e-09 65.9 37 78.4
EL10Ac2g04706 Beta vulgaris HOM05D006605 ORTHO05D008277 3.8e-09 65.5 36 83.3
Lalb_Chr18g0053081 Lupinus albus HOM05D006605 ORTHO05D008277 3.8e-09 65.5 40 75.0
Potri.008G058800 Populus trichocarpa HOM05D006605 ORTHO05D008277 3.8e-09 65.5 37 81.1
DCAR_011727 Daucus carota HOM05D006605 ORTHO05D008277 4.9e-09 65.1 37 78.4
Gohir.A10G222000 Gossypium hirsutum HOM05D006605 ORTHO05D008277 4.9e-09 65.1 37 78.4
Lsat_1_v5_gn_8_14921 Lactuca sativa HOM05D006605 ORTHO05D008277 4.9e-09 65.1 41 68.3
MD07G1203100 Malus domestica HOM05D006605 ORTHO05D008277 4.9e-09 65.1 37 78.4
Os01g0144100 Oryza sativa ssp. japonica HOM05D006605 ORTHO05D008277 4.9e-09 65.1 37 75.7
QL08p061156 Quercus lobata HOM05D006605 ORTHO05D008277 4.9e-09 65.1 37 78.4
Sc14g0004650 Simmondsia chinensis HOM05D006605 ORTHO05D008277 4.9e-09 65.1 37 78.4
Ca_08185_v3 Cicer arietinum L. HOM05D006605 ORTHO05D008277 6.4e-09 64.7 37 78.4
Hma1.2p1_0039F.1_g024420 Hydrangea macrophylla HOM05D006605 ORTHO05D008277 6.4e-09 64.7 37 81.1
Nitab4.5_0000120g0080 Nicotiana tabacum HOM05D006605 ORTHO05D008277 6.4e-09 64.7 37 75.7
Nitab4.5_0002872g0060 Nicotiana tabacum HOM05D006605 ORTHO05D008277 6.4e-09 64.7 37 75.7
Peaxi162Scf00736g00213 Petunia axillaris HOM05D006605 ORTHO05D008277 6.4e-09 64.7 37 75.7
Prupe.2G239300 Prunus persica HOM05D006605 ORTHO05D008277 6.4e-09 64.7 37 75.7
Thecc.10G038800 Theobroma cacao HOM05D006605 ORTHO05D008277 6.4e-09 64.7 37 75.7
TPR.G2861 Trifolium pratense HOM05D006605 ORTHO05D008277 6.4e-09 64.7 40 72.5
HPP92_019456 Vanilla planifolia HOM05D006605 ORTHO05D008277 6.4e-09 64.7 41 70.7
AT2G44920 Arabidopsis thaliana HOM05D006605 ORTHO05D008277 1.4e-08 63.5 35 80.0
Sopen06g032890 Solanum pennellii HOM05D006605 ORTHO05D008277 1.4e-08 63.5 41 68.3
PGSC0003DMG400034939 Solanum tuberosum HOM05D006605 ORTHO05D008277 1.4e-08 63.5 41 68.3
ECA233G2444 Erigeron canadensis HOM05D006605 ORTHO05D008277 1.9e-08 63.2 37 73.0
HanXRQChr08g0221071 Helianthus annuus HOM05D006605 ORTHO05D008277 1.9e-08 63.2 37 73.0
Medtr3g068150 Medicago truncatula HOM05D006605 ORTHO05D008277 1.9e-08 63.2 40 70.0
Hund16063 Selenicereus undatus HOM05D006605 ORTHO05D008277 1.9e-08 63.2 37 78.4
FAN03G2768 Fragaria x ananassa HOM05D006605 ORTHO05D008277 2.4e-08 62.8 35 77.1
RcHm_v2.0_Chr1g0368241 Rosa chinensis HOM05D006605 ORTHO05D008277 2.4e-08 62.8 35 77.1
SEGI_08946 Sequoiadendron giganteum HOM05D006605 ORTHO05D008277 2.4e-08 62.8 37 73.0
Oeu001504.1 Olea europaea HOM05D006605 ORTHO05D008277 3.2e-08 62.4 37 75.7
Aqoxy2G02333 Aquilegia oxysepala HOM05D006605 ORTHO05D008277 4.2e-08 62.0 35 80.0
TWI15G0193 Tripterygium wilfordii HOM05D006605 ORTHO05D008277 4.2e-08 62.0 36 75.0
FvH4_7g23000 Fragaria vesca HOM05D006605 ORTHO05D008277 7.1e-08 61.2 35 74.3
FAN01G0046 Fragaria x ananassa HOM05D006605 ORTHO05D008277 7.1e-08 61.2 35 74.3
FAN01G2186 Fragaria x ananassa HOM05D006605 ORTHO05D008277 7.1e-08 61.2 35 74.3
FAN06G3081 Fragaria x ananassa HOM05D006605 ORTHO05D008277 7.1e-08 61.2 35 74.3
FAN06G4444 Fragaria x ananassa HOM05D006605 ORTHO05D008277 7.1e-08 61.2 35 74.3
Rhsim03G0134500 Rhododendron simsii HOM05D006605 ORTHO05D008277 1.2e-07 60.5 35 74.3
Haze_17112 Corylus avellana HOM05D006605 ORTHO05D008277 2.1e-07 59.7 33 81.8
TAR636G1277 Trochodendron aralioides HOM05D006605 ORTHO05D008277 3.5e-07 58.9 36 69.4
CANSAT56G0196 Cannabis sativa HOM05D006605 ORTHO05D008277 4.6e-07 58.5 40 70.0
MBI05_g35187_MAGBIO Magnolia biondii HOM05D006605 ORTHO05D008277 4.6e-07 58.5 37 75.7
AagrBONN_evm.TU.Sc2ySwM_117.3127 Anthoceros agrestis HOM05D006605 ORTHO05D008277 1.3e-06 57.0 37 70.3
CARHR140160 Cardamine hirsuta HOM05D006605 ORTHO05D008277 1.3e-06 57.0 34 73.5
PSO339G4488 Papaver somniferum HOM05D006605 ORTHO05D008277 1.7e-06 56.6 35 74.3
PSO513G0127 Papaver somniferum HOM05D006605 ORTHO05D008277 1.7e-06 56.6 35 74.3
Atru.BG.275.p Acer truncatum HOM05D006605 ORTHO05D008277 8.7e-06 54.3 37 70.3


User provided reference genes

Program Settings