Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE02G3555 Ceratophyllum demersum HOM05D007847 ORTHO05D009946 1.0e-47 193.0 90 100.0
TAR381G1308 Trochodendron aralioides HOM05D007847 ORTHO05D009946 2.0e-19 99.0 62 75.8
CSS0006637 Camellia sinensis var. sinensis HOM05D007847 ORTHO05D009946 5.8e-19 97.4 66 69.7
CSS0008963 Camellia sinensis var. sinensis HOM05D007847 ORTHO05D009946 5.8e-19 97.4 66 69.7
Gorai.003G033500 Gossypium raimondii HOM05D007847 ORTHO05D009946 9.9e-19 96.7 66 65.2
Cc07_g07550 Coffea canephora HOM05D007847 ORTHO05D009946 1.3e-18 96.3 61 72.1
Eucgr.F02827 Eucalyptus grandis HOM05D007847 ORTHO05D009946 1.7e-18 95.9 65 66.2
Thecc.01G078900 Theobroma cacao HOM05D007847 ORTHO05D009946 1.7e-18 95.9 63 71.4
Actinidia11949 Actinidia chinensis HOM05D007847 ORTHO05D009946 2.2e-18 95.5 66 68.2
Gohir.A02G148500 Gossypium hirsutum HOM05D007847 ORTHO05D009946 2.9e-18 95.1 66 63.6
Gohir.D03G032000 Gossypium hirsutum HOM05D007847 ORTHO05D009946 2.9e-18 95.1 66 63.6
Haze_03966 Corylus avellana HOM05D007847 ORTHO05D009946 4.9e-18 94.4 61 72.1
MBI16_g08505_MAGBIO Magnolia biondii HOM05D007847 ORTHO05D009946 4.9e-18 94.4 64 67.2
Zm00001eb215660 Zea mays HOM05D007847 ORTHO05D009946 6.4e-18 94.0 64 67.2
Cfa006792 Carpinus fangiana HOM05D007847 ORTHO05D009946 8.4e-18 93.6 62 69.4
PSO541G2530 Papaver somniferum HOM05D007847 ORTHO05D009946 8.4e-18 93.6 64 70.3
Aqoxy6G02972 Aquilegia oxysepala HOM05D007847 ORTHO05D009946 1.1e-17 93.2 62 69.4
Manes.13G107200 Manihot esculenta HOM05D007847 ORTHO05D009946 1.1e-17 93.2 70 61.4
Os03g0726900 Oryza sativa ssp. japonica HOM05D007847 ORTHO05D009946 1.4e-17 92.8 61 68.9
QL06p038286 Quercus lobata HOM05D007847 ORTHO05D009946 1.4e-17 92.8 62 69.4
Dinv26974 Davidia involucrata HOM05D007847 ORTHO05D009946 2.4e-17 92.0 66 63.6
ECA238G4198 Erigeron canadensis HOM05D007847 ORTHO05D009946 2.4e-17 92.0 61 68.9
Nn5g30695 Nelumbo nucifera HOM05D007847 ORTHO05D009946 2.4e-17 92.0 62 69.4
Lj4C169G8 Lonicera japonica HOM05D007847 ORTHO05D009946 3.2e-17 91.7 66 65.2
CiPaw.08G148900 Carya illinoinensis HOM05D007847 ORTHO05D009946 4.2e-17 91.3 65 64.6
HanXRQChr14g0447671 Helianthus annuus HOM05D007847 ORTHO05D009946 4.2e-17 91.3 66 65.2
PSO675G2957 Papaver somniferum HOM05D007847 ORTHO05D009946 4.2e-17 91.3 64 68.8
CANSAT01G1865 Cannabis sativa HOM05D007847 ORTHO05D009946 5.4e-17 90.9 62 67.7
Duzib264G0083 Durio zibethinus HOM05D007847 ORTHO05D009946 9.2e-17 90.1 62 64.5
Peaxi162Scf00118g01311 Petunia axillaris HOM05D007847 ORTHO05D009946 9.2e-17 90.1 66 63.6
ATR0629G045 Amborella trichopoda HOM05D007847 ORTHO05D009946 1.2e-16 89.7 58 69.0
Nitab4.5_0005210g0020 Nicotiana tabacum HOM05D007847 ORTHO05D009946 1.2e-16 89.7 66 63.6
MD15G1303200 Malus domestica HOM05D007847 ORTHO05D009946 1.6e-16 89.4 62 62.9
FAN28G0215 Fragaria x ananassa HOM05D007847 ORTHO05D009946 2.1e-16 89.0 62 64.5
Solyc03g043870.3 Solanum lycopersicum HOM05D007847 ORTHO05D009946 2.1e-16 89.0 66 62.1
Sopen03g007680 Solanum pennellii HOM05D007847 ORTHO05D009946 2.1e-16 89.0 66 62.1
PGR102G2702 Punica granatum HOM05D007847 ORTHO05D009946 2.7e-16 88.6 66 60.6
Ciclev10026132m.g Citrus clementina HOM05D007847 ORTHO05D009946 3.5e-16 88.2 59 67.8
RcHm_v2.0_Chr2g0109231 Rosa chinensis HOM05D007847 ORTHO05D009946 3.5e-16 88.2 62 64.5
Atru.chr3.1082 Acer truncatum HOM05D007847 ORTHO05D009946 4.6e-16 87.8 62 64.5
MD02G1192700 Malus domestica HOM05D007847 ORTHO05D009946 4.6e-16 87.8 62 62.9
Nitab4.5_0002639g0020 Nicotiana tabacum HOM05D007847 ORTHO05D009946 6.0e-16 87.4 66 62.1
TWI77G0524 Tripterygium wilfordii HOM05D007847 ORTHO05D009946 6.0e-16 87.4 61 65.6
FvH4_1g18540 Fragaria vesca HOM05D007847 ORTHO05D009946 1.0e-15 86.7 62 62.9
FAN19G2742 Fragaria x ananassa HOM05D007847 ORTHO05D009946 1.0e-15 86.7 62 62.9
Prupe.6G213700 Prunus persica HOM05D007847 ORTHO05D009946 1.3e-15 86.3 59 66.1
THA.LOC104819277 Tarenaya hassleriana HOM05D007847 ORTHO05D009946 1.3e-15 86.3 63 58.7
Sabra07G0006500 Salix brachista HOM05D007847 ORTHO05D009946 1.7e-15 85.9 63 61.9
SEGI_26913 Sequoiadendron giganteum HOM05D007847 ORTHO05D009946 1.7e-15 85.9 62 61.3
Potri.007G008300 Populus trichocarpa HOM05D007847 ORTHO05D009946 2.3e-15 85.5 63 60.3
AL8G43460 Arabidopsis lyrata HOM05D007847 ORTHO05D009946 3.9e-15 84.7 62 58.1
A06p32610 Brassica napus HOM05D007847 ORTHO05D009946 3.9e-15 84.7 60 60.0
Thhalv10004606m.g Eutrema salsugineum HOM05D007847 ORTHO05D009946 5.1e-15 84.3 59 61.0
Sc22g0002130 Simmondsia chinensis HOM05D007847 ORTHO05D009946 5.1e-15 84.3 64 57.8
BcaC01g02838 Brassica carinata HOM05D007847 ORTHO05D009946 6.6e-15 84.0 60 60.0
C03p59920 Brassica napus HOM05D007847 ORTHO05D009946 6.6e-15 84.0 60 60.0
BolC3t18257H Brassica oleracea HOM05D007847 ORTHO05D009946 6.6e-15 84.0 60 60.0
BraA06t26189Z Brassica rapa HOM05D007847 ORTHO05D009946 6.6e-15 84.0 60 60.0
DCAR_010781 Daucus carota HOM05D007847 ORTHO05D009946 6.6e-15 84.0 60 60.0
Migut.H00314 Erythranthe guttata HOM05D007847 ORTHO05D009946 6.6e-15 84.0 70 55.7
AT5G65740 Arabidopsis thaliana HOM05D007847 ORTHO05D009946 1.9e-14 82.4 58 62.1
Mapoly0084s0053 Marchantia polymorpha HOM05D007847 ORTHO05D009946 2.5e-14 82.0 74 55.4
Sp2g28840 Schrenkiella parvula HOM05D007847 ORTHO05D009946 3.3e-14 81.6 60 60.0
AagrBONN_evm.TU.Sc2ySwM_362.720 Anthoceros agrestis HOM05D007847 ORTHO05D009946 5.6e-14 80.9 73 54.8
FAN23G2885 Fragaria x ananassa HOM05D007847 ORTHO05D009946 9.6e-14 80.1 69 53.6
CAN.G82.24 Capsicum annuum HOM05D007847 ORTHO05D009946 1.2e-13 79.7 64 56.2
Carub.0008s2664 Capsella rubella HOM05D007847 ORTHO05D009946 2.1e-13 79.0 60 56.7
SGA_v2.0_scaffold121G33081 Striga asiatica HOM05D007847 ORTHO05D009946 3.6e-13 78.2 91 42.9
Pp3c23_15090 Physcomitrium patens HOM05D007847 ORTHO05D009946 4.0e-12 74.7 73 50.7
FAN26G2270 Fragaria x ananassa HOM05D007847 ORTHO05D009946 1.2e-11 73.2 93 40.9
Oeu013362.2 Olea europaea HOM05D007847 ORTHO05D009946 9.3e-09 63.5 60 53.3
Cre03.g204801 Chlamydomonas reinhardtii HOM05D007847 ORTHO05D009946 2.7e-08 62.0 53 49.1


User provided reference genes

Program Settings