Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE02G3326 Ceratophyllum demersum HOM05D006427 ORTHO05D008147 2.4e-72 275.4 140 100.0
CDE06G0025 Ceratophyllum demersum HOM05D006427 ORTHO05D008147 1.0e-67 260.0 140 92.9
MBI07_g07335_MAGBIO Magnolia biondii HOM05D006427 ORTHO05D008147 1.6e-36 156.4 139 58.3
TAR371G1278 Trochodendron aralioides HOM05D006427 ORTHO05D006987 1.4e-35 153.3 139 61.9
GSVIVG01004944001 Vitis vinifera HOM05D006427 ORTHO05D008147 2.2e-33 146.0 118 62.7
ATR0582G340 Amborella trichopoda HOM05D006427 ORTHO05D008147 1.9e-32 142.9 141 53.2
QL03p049638 Quercus lobata HOM05D006427 ORTHO05D008147 3.2e-32 142.1 124 59.7
vmacro10314 Vaccinium macrocarpon HOM05D000095 ORTHO05D008147 2.1e-31 139.4 119 59.7
MD16G1129900 Malus domestica HOM05D006427 ORTHO05D008147 3.5e-31 138.7 140 53.6
Aqoxy5G03163 Aquilegia oxysepala HOM05D006427 ORTHO05D008147 4.6e-31 138.3 125 60.8
CANSAT01G2059 Cannabis sativa HOM05D006427 ORTHO05D008147 6.0e-31 137.9 104 60.6
CSS0005682 Camellia sinensis var. sinensis HOM05D006427 ORTHO05D008147 1.8e-30 136.3 89 71.9
Prupe.1G216700 Prunus persica HOM05D006427 ORTHO05D008147 1.8e-30 136.3 142 52.8
CsaV3_6G007780 Cucumis sativus L. HOM05D006427 ORTHO05D008147 3.9e-30 135.2 140 52.9
Dinv19142 Davidia involucrata HOM05D006427 ORTHO05D008147 3.9e-30 135.2 135 56.3
Nn3g16291 Nelumbo nucifera HOM05D006427 ORTHO05D008147 3.9e-30 135.2 141 57.4
Ca_08136_v3 Cicer arietinum L. HOM05D006427 ORTHO05D008147 6.7e-30 134.4 124 58.1
HPP92_021622 Vanilla planifolia HOM05D006427 ORTHO05D008147 1.1e-29 133.7 135 56.3
Psat3g093640 Pisum sativum HOM05D006427 ORTHO05D008147 1.5e-29 133.3 128 57.0
ClCG06G001750 Citrullus lanatus HOM05D006427 ORTHO05D006987 1.9e-29 132.9 117 57.3
COL.COLO4_21789 Corchorus olitorius HOM05D006427 ORTHO05D008147 1.9e-29 132.9 140 55.7
FAN12G4324 Fragaria x ananassa HOM05D006427 ORTHO05D008147 1.9e-29 132.9 144 56.2
Peaxi162Scf00128g01753 Petunia axillaris HOM05D006427 ORTHO05D008147 2.5e-29 132.5 136 57.4
Atru.chr2.853 Acer truncatum HOM05D006427 ORTHO05D008147 3.3e-29 132.1 97 66.0
Nn4g22155 Nelumbo nucifera HOM05D006427 ORTHO05D008147 3.3e-29 132.1 135 55.6
Sed0027051 Sechium edule HOM05D006427 ORTHO05D008147 3.3e-29 132.1 110 59.1
THA.LOC104805303 Tarenaya hassleriana HOM05D006427 ORTHO05D008147 3.3e-29 132.1 98 65.3
Duzib052G1158 Durio zibethinus HOM05D006427 ORTHO05D008147 4.3e-29 131.7 136 54.4
Hma1.2p1_1436F.1_g283150 Hydrangea macrophylla HOM05D006427 ORTHO05D008147 5.6e-29 131.3 156 48.7
Thecc.02G193800 Theobroma cacao HOM05D006427 ORTHO05D008147 7.4e-29 131.0 139 56.8
Cpa.g.sc70.74 Carica papaya HOM05D006427 ORTHO05D008147 9.6e-29 130.6 133 55.6
Haze_14945 Corylus avellana HOM05D006427 ORTHO05D008147 9.6e-29 130.6 141 53.9
Gohir.A04G100800 Gossypium hirsutum HOM05D006427 ORTHO05D008147 9.6e-29 130.6 135 56.3
FAN07G1740 Fragaria x ananassa HOM05D006427 ORTHO05D008147 1.3e-28 130.2 143 53.1
BcaC04g23927 Brassica carinata HOM05D006427 ORTHO05D008147 1.6e-28 129.8 131 57.3
C09p03290 Brassica napus HOM05D006427 ORTHO05D008147 1.6e-28 129.8 131 57.3
A09p03110 Brassica napus HOM05D001087 ORTHO05D001846 2.1e-28 129.4 131 56.5
BraA09t35950Z Brassica rapa HOM05D006427 ORTHO05D003553 2.1e-28 129.4 131 56.5
MELO3C022354.2 Cucumis melo HOM05D006427 ORTHO05D008147 2.8e-28 129.0 136 51.5
FAN17G2476 Fragaria x ananassa HOM05D006427 ORTHO05D006987 2.8e-28 129.0 143 52.4
Gohir.D04G140100 Gossypium hirsutum HOM05D006427 ORTHO05D008147 2.8e-28 129.0 134 55.2
arahy.Tifrunner.gnm1.ann1.YL5YHR Arachis hypogaea HOM05D006427 ORTHO05D008147 3.6e-28 128.6 139 54.7
Glyma.16G049000 Glycine max HOM05D006427 ORTHO05D008147 4.8e-28 128.3 125 56.0
Gorai.012G125000 Gossypium raimondii HOM05D006427 ORTHO05D008147 6.2e-28 127.9 135 57.0
Rhsim08G0039400 Rhododendron simsii HOM05D006427 ORTHO05D008147 6.2e-28 127.9 102 62.7
Duzib132G1024 Durio zibethinus HOM05D006427 ORTHO05D008147 8.1e-28 127.5 136 54.4
PSO017G1866 Papaver somniferum HOM05D006427 ORTHO05D008147 8.1e-28 127.5 98 64.3
PSO478G1388 Papaver somniferum HOM05D006427 ORTHO05D008147 8.1e-28 127.5 86 66.3
Thecc.04G047300 Theobroma cacao HOM05D006427 ORTHO05D008147 8.1e-28 127.5 136 55.9
Sp2g15860 Schrenkiella parvula HOM05D006427 ORTHO05D008147 1.1e-27 127.1 105 62.9
arahy.Tifrunner.gnm1.ann1.BNAN8S Arachis hypogaea HOM05D006427 ORTHO05D008147 1.4e-27 126.7 139 54.0
Duzib264G1258 Durio zibethinus HOM05D006427 ORTHO05D008147 1.4e-27 126.7 138 53.6
Manes.09G187300 Manihot esculenta HOM05D006427 ORTHO05D008147 1.4e-27 126.7 98 60.2
vmacro18378 Vaccinium macrocarpon HOM05D006427 ORTHO05D008147 1.4e-27 126.7 127 54.3
Glyma.19G102400 Glycine max HOM05D006427 ORTHO05D008147 1.8e-27 126.3 125 56.0
Medtr7g084000 Medicago truncatula HOM05D006427 ORTHO05D008147 1.8e-27 126.3 131 56.5
PGR119G1648 Punica granatum HOM05D006427 ORTHO05D008147 2.4e-27 125.9 159 49.7
QL02p069636 Quercus lobata HOM05D006427 ORTHO05D008147 4.0e-27 125.2 138 55.1
VMungo1383G1825 Vigna mungo HOM05D006427 ORTHO05D008147 4.0e-27 125.2 101 59.4
Thhalv10005093m.g Eutrema salsugineum HOM05D006427 ORTHO05D008147 5.3e-27 124.8 125 53.6
CiPaw.03G002500 Carya illinoinensis HOM05D006427 ORTHO05D008147 6.9e-27 124.4 138 54.3
Ciclev10017113m.g Citrus clementina HOM05D006427 ORTHO05D008147 6.9e-27 124.4 140 52.9
Sabra01G0046200 Salix brachista HOM05D006427 ORTHO05D008147 6.9e-27 124.4 131 50.4
Lj1g0026899 Lotus japonicus HOM05D006427 ORTHO05D008147 2.6e-26 122.5 140 52.1
Phvul.001G085200 Phaseolus vulgaris HOM05D006427 ORTHO05D008147 3.4e-26 122.1 126 51.6
C02p53270 Brassica napus HOM05D006427 ORTHO05D008147 4.5e-26 121.7 128 53.9
Gohir.A11G063600 Gossypium hirsutum HOM05D006427 ORTHO05D008147 4.5e-26 121.7 113 59.3
Manes.04G092801 Manihot esculenta HOM05D006427 ORTHO05D008147 4.5e-26 121.7 143 55.9
Potri.001G066400 Populus trichocarpa HOM05D006427 ORTHO05D008147 4.5e-26 121.7 131 49.6
RhsimUnG0101500 Rhododendron simsii HOM05D006427 ORTHO05D008147 4.5e-26 121.7 78 71.8
Eucgr.G01934 Eucalyptus grandis HOM05D006427 ORTHO05D008147 5.8e-26 121.3 137 51.8
Atru.chr12.1402 Acer truncatum HOM05D006427 ORTHO05D008147 7.6e-26 120.9 77 70.1
BcaC03g17381 Brassica carinata HOM05D006071 ORTHO05D007462 7.6e-26 120.9 124 54.0
Cc11_g15110 Coffea canephora HOM05D006427 ORTHO05D008147 7.6e-26 120.9 136 50.7
SEGI_30338 Sequoiadendron giganteum HOM05D006427 ORTHO05D008147 9.9e-26 120.6 126 52.4
Gohir.D11G067900 Gossypium hirsutum HOM05D006427 ORTHO05D008147 1.3e-25 120.2 132 54.5
Gorai.007G072700 Gossypium raimondii HOM05D006427 ORTHO05D008147 1.3e-25 120.2 132 54.5
BraA02t08479Z Brassica rapa HOM05D006427 ORTHO05D008147 2.2e-25 119.4 114 56.1
Ciclev10006190m.g Citrus clementina HOM05D006427 ORTHO05D008147 2.2e-25 119.4 94 63.8
BcaB07g30216 Brassica carinata HOM05D006427 ORTHO05D008147 2.9e-25 119.0 131 54.2
Lj3g0013404 Lotus japonicus HOM05D006427 ORTHO05D008147 2.9e-25 119.0 95 57.9
A02p34710 Brassica napus HOM05D006427 ORTHO05D008147 6.4e-25 117.9 124 53.2
PGR042G0015 Punica granatum HOM05D006427 ORTHO05D008147 8.4e-25 117.5 111 56.8
CsaV3_3G027740 Cucumis sativus L. HOM05D006427 ORTHO05D008147 1.1e-24 117.1 135 54.1
TWI18G0640 Tripterygium wilfordii HOM05D006427 ORTHO05D008147 2.4e-24 115.9 133 53.4
Atru.chr10.1283 Acer truncatum HOM05D006427 ORTHO05D008147 4.2e-24 115.2 95 60.0
GSVIVG01032993001 Vitis vinifera HOM05D006427 ORTHO05D008147 5.5e-24 114.8 141 53.2
Eucgr.G01965 Eucalyptus grandis HOM05D006427 ORTHO05D008147 1.6e-23 113.2 126 50.0
TWI36G1420 Tripterygium wilfordii HOM05D006427 ORTHO05D008147 1.6e-23 113.2 129 53.5
Sopen09g034980 Solanum pennellii HOM05D006427 ORTHO05D008147 2.7e-23 112.5 132 47.0
Carub.0005s0476 Capsella rubella HOM05D006427 ORTHO05D008147 6.0e-23 111.3 100 59.0
CARHR147760 Cardamine hirsuta HOM05D006427 ORTHO05D008147 7.9e-23 110.9 133 49.6
AT3G26740 Arabidopsis thaliana HOM05D006427 ORTHO05D008147 1.0e-22 110.5 108 56.5
Os01g0102900 Oryza sativa ssp. japonica HOM05D006427 ORTHO05D008147 1.3e-22 110.2 99 56.6
Potri.003G163402 Populus trichocarpa HOM05D006427 ORTHO05D008147 2.3e-22 109.4 94 57.4
Solyc09g092110.4 Solanum lycopersicum HOM05D006427 ORTHO05D008147 2.3e-22 109.4 132 46.2
AL5G15590 Arabidopsis lyrata HOM05D006427 ORTHO05D008147 3.9e-22 108.6 131 50.4
MSTRG.3040 Avicennia marina HOM05D006427 ORTHO05D008147 3.9e-22 108.6 129 48.1
Duzib187G0815 Durio zibethinus HOM05D006427 ORTHO05D008147 8.7e-22 107.5 78 67.9
MELO3C014813.2 Cucumis melo HOM05D006427 ORTHO05D008147 1.5e-21 106.7 120 54.2
SalBow4G2027 Salvia bowleyana HOM05D002416 ORTHO05D002554 2.5e-21 105.9 98 54.1
CANSAT64G0982 Cannabis sativa HOM05D006427 ORTHO05D008147 3.3e-21 105.5 128 49.2
ECA234G1075 Erigeron canadensis HOM05D006427 ORTHO05D008147 7.4e-21 104.4 97 55.7
SalBow4G0295 Salvia bowleyana HOM05D002416 ORTHO05D002554 9.6e-21 104.0 131 47.3
PGSC0003DMG400026417 Solanum tuberosum HOM05D006427 ORTHO05D008147 9.6e-21 104.0 136 43.4
Aa31LG2G5820 Aethionema arabicum HOM05D006427 ORTHO05D008147 4.8e-20 101.7 119 49.6
Atru.chr5.1933 Acer truncatum HOM05D006427 ORTHO05D008147 1.1e-19 100.5 77 59.7
HanXRQChr16g0499601 Helianthus annuus HOM05D006427 ORTHO05D008147 1.8e-19 99.8 128 44.5
SGA_v2.0_scaffold44G16952 Striga asiatica HOM05D006427 ORTHO05D008147 6.9e-19 97.8 134 43.3
Migut.F00015 Erythranthe guttata HOM05D006427 ORTHO05D008147 8.4e-17 90.9 133 45.1
CBR_g20422 Chara braunii HOM05D006427 ORTHO05D008147 1.1e-16 90.5 136 38.2
Atru.chr6.2655 Acer truncatum HOM05D006427 ORTHO05D008147 1.9e-16 89.7 68 61.8
Mapoly0029s0093 Marchantia polymorpha HOM05D006427 ORTHO05D008147 7.1e-16 87.8 133 41.4
Aqoxy5G03161 Aquilegia oxysepala HOM05D006427 ORTHO05D008147 4.6e-15 85.1 68 61.8
Zm00001eb138400 Zea mays HOM05D000461 ORTHO05D008147 4.6e-15 85.1 90 46.7
RcHm_v2.0_Chr4g0429011 Rosa chinensis HOM05D006427 ORTHO05D008147 1.3e-14 83.6 120 47.5
Hund04203 Selenicereus undatus HOM05D006427 ORTHO05D008147 1.8e-14 83.2 70 61.4
Zm00001eb182180 Zea mays HOM05D006427 ORTHO05D008147 6.7e-14 81.3 82 48.8
FvH4_4g22790 Fragaria vesca HOM05D006427 ORTHO05D008147 1.5e-13 80.1 120 48.3
COL.COLO4_13367 Corchorus olitorius HOM05D006427 ORTHO05D008147 2.5e-13 79.3 111 43.2
Potri.014G145500 Populus trichocarpa HOM05D006427 ORTHO05D008147 1.8e-11 73.2 117 41.9
ClCG05G012680 Citrullus lanatus HOM05D006427 ORTHO05D008147 2.4e-11 72.8 119 42.9
Atru.chr9.488 Acer truncatum HOM05D006427 ORTHO05D008147 1.2e-10 70.5 73 52.1
Zm00001eb127000 Zea mays HOM05D006427 ORTHO05D008147 1.2e-10 70.5 81 45.7
EL10Ac6g13399 Beta vulgaris HOM05D006427 ORTHO05D008147 2.6e-10 69.3 111 43.2
Sc03g0004990 Simmondsia chinensis HOM05D006427 ORTHO05D008147 1.7e-09 66.6 73 47.9
Zm00001eb390880 Zea mays HOM05D001191 ORTHO05D000979 9.3e-08 60.8 85 40.0
BolC2t11399H Brassica oleracea HOM05D006427 ORTHO05D008147 6.1e-07 58.2 90 44.4


User provided reference genes

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