Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE02G2880 Ceratophyllum demersum HOM05D001439 ORTHO05D007599 9.2e-223 776.5 388 100.0
CDE01G0356 Ceratophyllum demersum HOM05D001439 ORTHO05D007599 8.1e-94 348.2 261 71.6
CDE02G3848 Ceratophyllum demersum HOM05D001439 ORTHO05D007599 1.6e-73 280.8 367 51.8
TAR375G1143 Trochodendron aralioides HOM05D001439 ORTHO05D007599 1.2e-33 148.3 382 33.8
Actinidia06779 Actinidia chinensis HOM05D001439 ORTHO05D007599 4.0e-32 143.3 402 31.6
FAN09G0293 Fragaria x ananassa HOM05D001439 ORTHO05D007599 4.0e-32 143.3 389 31.9
GSVIVG01036776001 Vitis vinifera HOM05D001439 ORTHO05D007599 1.5e-31 141.4 421 30.9
Nn4g24992 Nelumbo nucifera HOM05D001439 ORTHO05D007599 5.7e-31 139.4 355 33.8
RcHm_v2.0_Chr2g0148261 Rosa chinensis HOM05D001439 ORTHO05D007599 7.5e-31 139.0 398 31.7
Atru.chr6.3472 Acer truncatum HOM05D001439 ORTHO05D007599 1.3e-30 138.3 379 31.1
FAN05G2787 Fragaria x ananassa HOM05D001439 ORTHO05D007599 2.2e-30 137.5 389 32.1
MBI18_g11240_MAGBIO Magnolia biondii HOM05D001439 ORTHO05D007599 2.2e-30 137.5 400 31.2
FAN02G0189 Fragaria x ananassa HOM05D001439 ORTHO05D007599 6.3e-30 136.0 389 30.6
FvH4_6g36260 Fragaria vesca HOM05D001439 ORTHO05D007599 8.3e-30 135.6 389 31.6
Lj2A362T44 Lonicera japonica HOM05D001439 ORTHO05D007599 1.1e-29 135.2 402 33.1
QL04p042996 Quercus lobata HOM05D001439 ORTHO05D007599 1.1e-29 135.2 406 32.5
Sopen11g002130 Solanum pennellii HOM05D001439 ORTHO05D007599 3.1e-29 133.7 403 31.0
CSS0026010 Camellia sinensis var. sinensis HOM05D001439 ORTHO05D007599 4.1e-29 133.3 271 33.9
CAN.G1256.6 Capsicum annuum HOM05D001439 ORTHO05D007599 5.4e-29 132.9 367 30.8
Solyc11g006200.2 Solanum lycopersicum HOM05D001439 ORTHO05D007599 5.4e-29 132.9 403 31.3
Aa31sc565G40 Aethionema arabicum HOM05D001439 ORTHO05D007599 1.6e-28 131.3 329 33.1
FAN14G5546 Fragaria x ananassa HOM05D001439 ORTHO05D007599 1.6e-28 131.3 283 35.3
FAN14G5823 Fragaria x ananassa HOM05D001439 ORTHO05D007599 1.6e-28 131.3 283 35.3
Actinidia03300 Actinidia chinensis HOM05D001439 ORTHO05D007599 2.7e-28 130.6 407 31.0
Peaxi162Scf00120g00521 Petunia axillaris HOM05D001439 ORTHO05D007599 3.5e-28 130.2 347 31.4
Nitab4.5_0003799g0010 Nicotiana tabacum HOM05D001439 ORTHO05D007599 4.5e-28 129.8 352 32.7
Aqoxy1G03116 Aquilegia oxysepala HOM05D001439 ORTHO05D007599 5.9e-28 129.4 278 36.7
PGSC0003DMG400000999 Solanum tuberosum HOM05D001439 ORTHO05D007599 7.7e-28 129.0 404 30.9
Nitab4.5_0005417g0010 Nicotiana tabacum HOM05D001439 ORTHO05D007599 1.0e-27 128.6 227 40.1
Cfa002303 Carpinus fangiana HOM05D001439 ORTHO05D007599 1.7e-27 127.9 263 36.5
Haze_24510 Corylus avellana HOM05D001439 ORTHO05D007599 1.7e-27 127.9 349 31.5
ClCG09G010560 Citrullus lanatus HOM05D001439 ORTHO05D007599 2.9e-27 127.1 373 28.7
Ciclev10014094m.g Citrus clementina HOM05D001439 ORTHO05D007599 6.6e-27 125.9 280 34.3
Lalb_Chr05g0223731 Lupinus albus HOM05D001439 ORTHO05D007599 6.6e-27 125.9 351 30.8
MD09G1170800 Malus domestica HOM05D001439 ORTHO05D007599 6.6e-27 125.9 286 33.9
PSO063G6089 Papaver somniferum HOM05D001439 ORTHO05D007599 8.6e-27 125.6 364 29.7
Prupe.3G029400 Prunus persica HOM05D001439 ORTHO05D007599 8.6e-27 125.6 284 33.5
Ca_17413_v3 Cicer arietinum L. HOM05D001439 ORTHO05D007599 1.5e-26 124.8 353 30.3
Hma1.2p1_0345F.1_g131230 Hydrangea macrophylla HOM05D001439 ORTHO05D007599 1.5e-26 124.8 352 29.5
Hma1.2p1_0345F.1_g131250 Hydrangea macrophylla HOM05D001439 ORTHO05D007599 1.5e-26 124.8 352 29.5
Dinv30126 Davidia involucrata HOM05D001439 ORTHO05D007599 1.9e-26 124.4 397 30.2
PSO782G0625 Papaver somniferum HOM05D001439 ORTHO05D007599 1.9e-26 124.4 281 31.3
Glyma.05G221500 Glycine max HOM05D001439 ORTHO05D007599 2.5e-26 124.0 356 30.6
Sed0014026 Sechium edule HOM05D001439 ORTHO05D007599 2.5e-26 124.0 348 30.2
Cpa.g.sc8.11 Carica papaya HOM05D001439 ORTHO05D007599 5.5e-26 122.9 292 33.6
MD17G1156400 Malus domestica HOM05D001439 ORTHO05D007599 5.5e-26 122.9 393 29.5
Potri.014G173300 Populus trichocarpa HOM05D001439 ORTHO05D007599 5.5e-26 122.9 406 28.3
Sabra14G0132600 Salix brachista HOM05D001439 ORTHO05D007599 5.5e-26 122.9 392 29.1
Cc02_g09100 Coffea canephora HOM05D001439 ORTHO05D007599 1.2e-25 121.7 233 35.6
THA.LOC104826638 Tarenaya hassleriana HOM05D001439 ORTHO05D007599 2.8e-25 120.6 150 44.7
CANSAT56G2417 Cannabis sativa HOM05D001439 ORTHO05D007599 1.0e-24 118.6 328 29.9
Glyma.08G028000 Glycine max HOM05D001439 ORTHO05D007599 1.8e-24 117.9 338 30.2
HanXRQChr07g0200581 Helianthus annuus HOM05D001439 ORTHO05D007599 3.0e-24 117.1 210 38.6
THA.LOC104815378 Tarenaya hassleriana HOM05D001439 ORTHO05D007599 3.0e-24 117.1 281 33.8
CsaV3_7G023680 Cucumis sativus L. HOM05D001439 ORTHO05D007599 4.0e-24 116.7 157 40.8
arahy.Tifrunner.gnm1.ann1.0SQJ2Y Arachis hypogaea HOM05D001439 ORTHO05D007599 5.2e-24 116.3 276 34.1
Thecc.01G203900 Theobroma cacao HOM05D001439 ORTHO05D007599 5.2e-24 116.3 397 29.0
arahy.Tifrunner.gnm1.ann1.CH5A50 Arachis hypogaea HOM05D001439 ORTHO05D007599 8.9e-24 115.5 272 34.2
ECA238G3650 Erigeron canadensis HOM05D001439 ORTHO05D007599 8.9e-24 115.5 215 34.0
ATR1098G049 Amborella trichopoda HOM05D001439 ORTHO05D007599 1.2e-23 115.2 325 31.4
AL9U11900 Arabidopsis lyrata HOM05D001439 ORTHO05D007599 1.2e-23 115.2 204 36.3
CARHR218110 Cardamine hirsuta HOM05D001439 ORTHO05D007599 1.5e-23 114.8 200 36.5
VMungo0251G2358 Vigna mungo HOM05D001439 ORTHO05D007599 1.5e-23 114.8 345 28.7
Gohir.D11G152000 Gossypium hirsutum HOM05D001439 ORTHO05D007599 2.0e-23 114.4 362 29.6
vmacro10348 Vaccinium macrocarpon HOM05D001439 ORTHO05D007599 2.0e-23 114.4 261 34.1
MELO3C024106.2 Cucumis melo HOM05D001439 ORTHO05D007599 2.6e-23 114.0 157 39.5
Manes.12G058700 Manihot esculenta HOM05D001439 ORTHO05D007599 2.6e-23 114.0 402 28.4
SalBow3G1926 Salvia bowleyana HOM05D001439 ORTHO05D007599 3.4e-23 113.6 354 29.4
Thhalv10024262m.g Eutrema salsugineum HOM05D001439 ORTHO05D007599 4.4e-23 113.2 203 37.4
SGA_v2.0_scaffold90G27703 Striga asiatica HOM05D000200 ORTHO05D000262 4.4e-23 113.2 289 30.8
TWI18G1300 Tripterygium wilfordii HOM05D001439 ORTHO05D007599 5.7e-23 112.8 275 29.5
Migut.F00815 Erythranthe guttata HOM05D001439 ORTHO05D007599 7.5e-23 112.5 230 37.0
CANSAT56G1506 Cannabis sativa HOM05D001439 ORTHO05D007599 9.8e-23 112.1 206 36.4
Duzib138G1511 Durio zibethinus HOM05D001439 ORTHO05D007599 9.8e-23 112.1 361 29.1
Gorai.007G162700 Gossypium raimondii HOM05D001439 ORTHO05D007599 9.8e-23 112.1 361 29.4
DCAR_028382 Daucus carota HOM05D001439 ORTHO05D007599 1.3e-22 111.7 369 26.3
Lj4g0024460 Lotus japonicus HOM05D001439 ORTHO05D007599 2.9e-22 110.5 361 28.8
Eucgr.K01361 Eucalyptus grandis HOM05D001439 ORTHO05D007599 4.9e-22 109.8 326 29.8
Gohir.A11G145900 Gossypium hirsutum HOM05D001439 ORTHO05D007599 6.3e-22 109.4 361 29.1
AT4G12750 Arabidopsis thaliana HOM05D001439 ORTHO05D007599 8.3e-22 109.0 231 35.5
Duzib133G1111 Durio zibethinus HOM05D001439 ORTHO05D007599 8.3e-22 109.0 236 34.3
Oeu016030.1 Olea europaea HOM05D001439 ORTHO05D007599 1.1e-21 108.6 248 34.7
Phvul.002G303200 Phaseolus vulgaris HOM05D001439 ORTHO05D007599 1.1e-21 108.6 221 33.9
Psat7g021400 Pisum sativum HOM05D001439 ORTHO05D007599 1.1e-21 108.6 218 34.9
Lalb_Chr09g0331921 Lupinus albus HOM05D001439 ORTHO05D007599 1.4e-21 108.2 336 29.2
MSTRG.9529 Avicennia marina HOM05D001439 ORTHO05D007599 1.8e-21 107.8 248 35.1
Rhsim09G0138700 Rhododendron simsii HOM05D001439 ORTHO05D007599 3.2e-21 107.1 262 33.2
C03p90000 Brassica napus HOM05D001439 ORTHO05D007599 4.1e-21 106.7 139 43.9
TPR.G22823 Trifolium pratense HOM05D001439 ORTHO05D007599 4.1e-21 106.7 232 33.2
Sp7g09140 Schrenkiella parvula HOM05D001439 ORTHO05D007599 5.4e-21 106.3 141 42.6
Carub.0007s3007 Capsella rubella HOM05D001439 ORTHO05D007599 7.0e-21 105.9 150 40.0
Ah.04g162790 Amaranthus hybridus HOM05D001439 ORTHO05D007599 9.2e-21 105.5 357 28.0
BcaC01g01268 Brassica carinata HOM05D001439 ORTHO05D007599 1.2e-20 105.1 139 43.2
BolC3t21320H Brassica oleracea HOM05D001439 ORTHO05D007599 1.2e-20 105.1 139 43.2
Sc09g0004660 Simmondsia chinensis HOM05D001439 ORTHO05D007599 1.2e-20 105.1 228 34.6
AUR62035538 Chenopodium quinoa HOM05D001439 ORTHO05D007599 1.6e-20 104.8 267 32.2
AUR62037546 Chenopodium quinoa HOM05D001439 ORTHO05D007599 1.6e-20 104.8 267 30.7
TWI36G0060 Tripterygium wilfordii HOM05D001439 ORTHO05D007599 1.6e-20 104.8 277 28.2
BraA08t32320Z Brassica rapa HOM05D001439 ORTHO05D007599 2.7e-20 104.0 139 43.2
Zm00001eb061430 Zea mays HOM05D001439 ORTHO05D007599 2.7e-20 104.0 291 30.2
A08p02880 Brassica napus HOM05D001439 ORTHO05D007599 1.0e-19 102.1 139 42.4
BcaB04g17209 Brassica carinata HOM05D001439 ORTHO05D007599 1.7e-19 101.3 141 41.8
PGR044G2616 Punica granatum HOM05D001439 ORTHO05D007599 2.9e-19 100.5 335 29.6
Hund22225 Selenicereus undatus HOM05D001439 ORTHO05D007599 5.0e-19 99.8 157 37.6
COL.COLO4_19723 Corchorus olitorius HOM05D001439 ORTHO05D007599 6.6e-19 99.4 275 32.0
HanXRQChr14g0455641 Helianthus annuus HOM05D001439 ORTHO05D007599 3.3e-18 97.1 218 33.0
EL10Ac4g08849 Beta vulgaris HOM05D001439 ORTHO05D007599 5.6e-18 96.3 206 35.9
HPP92_025328 Vanilla planifolia HOM05D001439 ORTHO05D007599 5.6e-18 96.3 183 35.0
unitig_46.g18727 Utricularia gibba HOM05D001439 ORTHO05D007599 7.3e-18 95.9 205 33.7
Psat0s2790g0080 Pisum sativum HOM05D003679 ORTHO05D004265 2.8e-17 94.0 183 32.8
MSTRG.9006 Avicennia marina HOM05D001439 ORTHO05D007599 2.6e-15 87.4 252 31.0
Lsat_1_v5_gn_2_107580 Lactuca sativa HOM05D001439 ORTHO05D007599 5.8e-15 86.3 280 32.1
Psat0s2790g0120 Pisum sativum HOM05D003679 ORTHO05D004265 2.9e-14 84.0 83 44.6
SHI10198 Sapria himalayana HOM05D001439 ORTHO05D007599 5.4e-13 79.7 149 35.6
SEGI_20521 Sequoiadendron giganteum HOM05D001439 ORTHO05D007599 2.7e-12 77.4 157 31.2
Thecc.06G181000 Theobroma cacao HOM05D001439 ORTHO05D002726 6.2e-09 66.2 167 31.1
TWI38G1950 Tripterygium wilfordii HOM05D001439 ORTHO05D002726 8.1e-09 65.9 165 29.1
Atru.chr10.1798 Acer truncatum HOM05D001439 ORTHO05D002726 1.1e-08 65.5 170 28.8
TPR.G19912 Trifolium pratense HOM05D001439 ORTHO05D002726 1.8e-08 64.7 176 30.7
CDE10G0226 Ceratophyllum demersum HOM05D001439 ORTHO05D002726 2.3e-08 64.3 149 31.5
Dinv29934 Davidia involucrata HOM05D001439 ORTHO05D002726 2.3e-08 64.3 168 27.4
VMungo0540G1437 Vigna mungo HOM05D001439 ORTHO05D002726 5.2e-08 63.2 177 28.8
SEGI_39795 Sequoiadendron giganteum HOM05D001439 ORTHO05D002726 1.2e-07 62.0 152 30.3
TWI38G1102 Tripterygium wilfordii HOM05D001439 ORTHO05D002726 1.5e-07 61.6 168 27.4
BcaB03g12103 Brassica carinata HOM05D001439 ORTHO05D002726 2.0e-07 61.2 188 31.4
Nn1g06413 Nelumbo nucifera HOM05D001439 ORTHO05D002726 2.0e-07 61.2 176 27.3
Duzib160G0499 Durio zibethinus HOM05D001439 ORTHO05D002726 2.6e-07 60.8 167 30.5
SEGI_30380 Sequoiadendron giganteum HOM05D001439 ORTHO05D002726 3.4e-07 60.5 151 29.8
COL.COLO4_31415 Corchorus olitorius HOM05D001439 ORTHO05D002726 4.4e-07 60.1 169 29.6
Lj1C697G7 Lonicera japonica HOM05D001439 ORTHO05D002726 4.4e-07 60.1 157 26.8
Lj4g0015660 Lotus japonicus HOM05D001439 ORTHO05D002726 4.4e-07 60.1 165 27.3
EL10Ac9g20819 Beta vulgaris HOM05D001439 ORTHO05D002726 7.5e-07 59.3 163 26.4
Cpa.g.sc27.3 Carica papaya HOM05D001439 ORTHO05D002726 9.8e-07 58.9 160 27.5
AUR62038987 Chenopodium quinoa HOM05D001439 ORTHO05D002726 1.3e-06 58.5 187 22.5
AUR62036057 Chenopodium quinoa HOM05D001439 ORTHO05D002726 1.7e-06 58.2 187 22.5
arahy.Tifrunner.gnm1.ann1.P48F6M Arachis hypogaea HOM05D001439 ORTHO05D002726 2.2e-06 57.8 182 28.6
Phvul.006G182000 Phaseolus vulgaris HOM05D001439 ORTHO05D002726 2.2e-06 57.8 177 27.1
QL08p040227 Quercus lobata HOM05D001439 ORTHO05D002726 2.9e-06 57.4 181 24.9
TAR627G0298 Trochodendron aralioides HOM05D001439 ORTHO05D002726 3.7e-06 57.0 176 27.3
arahy.Tifrunner.gnm1.ann1.DG2K05 Arachis hypogaea HOM05D001439 ORTHO05D002726 6.4e-06 56.2 175 29.1
CARHR027930 Cardamine hirsuta HOM05D001439 ORTHO05D002726 6.4e-06 56.2 229 27.9
Cpa.g.sc83.96 Carica papaya HOM05D001439 ORTHO05D002726 6.4e-06 56.2 200 23.5
Duzib235G0176 Durio zibethinus HOM05D001439 ORTHO05D002726 6.4e-06 56.2 164 27.4
Manes.17G049300 Manihot esculenta HOM05D001439 ORTHO05D002726 6.4e-06 56.2 159 28.9
Actinidia07602 Actinidia chinensis HOM05D001439 ORTHO05D002726 8.3e-06 55.8 172 28.5
ATR0730G134 Amborella trichopoda HOM05D001439 ORTHO05D002726 8.3e-06 55.8 167 26.3
Zm00001eb295800 Zea mays HOM05D001439 ORTHO05D002726 8.3e-06 55.8 165 27.9


User provided reference genes

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