Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE02G2039 Ceratophyllum demersum HOM05D051348 ORTHO05D003816 4.4e-242 840.9 429 100.0
CDE05G1528 Ceratophyllum demersum HOM05D051348 ORTHO05D003816 8.4e-225 783.5 430 91.9
MBI15_g18232_MAGBIO Magnolia biondii HOM05D003426 ORTHO05D003816 2.2e-15 87.8 219 30.6
Nn2g12424 Nelumbo nucifera HOM05D003426 ORTHO05D003816 2.0e-13 81.3 262 26.7
TAR625G0371 Trochodendron aralioides HOM05D000650 ORTHO05D000735 6.6e-12 76.3 101 40.6
Sed0003803 Sechium edule HOM05D005220 ORTHO05D006082 1.1e-11 75.5 195 31.8
Lsat_1_v5_gn_5_21940 Lactuca sativa HOM05D005220 ORTHO05D006082 1.5e-11 75.1 228 28.5
Dinv17422 Davidia involucrata HOM05D003426 ORTHO05D003816 3.3e-11 73.9 178 33.1
Sabra09G0060100 Salix brachista HOM05D000650 ORTHO05D007302 5.6e-11 73.2 193 28.0
Atru.chr7.23 Acer truncatum HOM05D003426 ORTHO05D003816 1.2e-10 72.0 176 31.8
BcaC06g33175 Brassica carinata HOM05D001456 ORTHO05D002799 1.6e-10 71.6 165 28.5
ECA246G3789 Erigeron canadensis HOM05D005220 ORTHO05D006082 3.6e-10 70.5 171 28.7
Potri.001G283000 Populus trichocarpa HOM05D000650 ORTHO05D007302 3.6e-10 70.5 211 29.4
Aqoxy7G03377 Aquilegia oxysepala HOM05D003426 ORTHO05D003816 4.7e-10 70.1 296 30.1
MD14G1208900 Malus domestica HOM05D005220 ORTHO05D006082 4.7e-10 70.1 193 30.6
Glyma.17G073000 Glycine max HOM05D003426 ORTHO05D003816 6.2e-10 69.7 344 26.2
CSS0024837 Camellia sinensis var. sinensis HOM05D003426 ORTHO05D003816 1.4e-09 68.6 172 30.8
CsaV3_1G002740 Cucumis sativus L. HOM05D005220 ORTHO05D006082 1.4e-09 68.6 214 28.0
Oeu021305.2 Olea europaea HOM05D003426 ORTHO05D003816 1.4e-09 68.6 296 24.7
TAR625G0266 Trochodendron aralioides HOM05D000650 ORTHO05D003816 1.4e-09 68.6 172 32.6
Lsat_1_v5_gn_8_63641 Lactuca sativa HOM05D003426 ORTHO05D003816 1.8e-09 68.2 167 30.5
Glyma.17G184200 Glycine max HOM05D003426 ORTHO05D003816 2.3e-09 67.8 336 25.6
Glyma.17G072900 Glycine max HOM05D003426 ORTHO05D003816 3.1e-09 67.4 281 26.0
Hund02984 Selenicereus undatus HOM05D016866 ORTHO05D015160 3.1e-09 67.4 242 28.9
ATR0580G137 Amborella trichopoda HOM05D003426 ORTHO05D003816 4.0e-09 67.0 167 32.3
Phvul.003G155200 Phaseolus vulgaris HOM05D003426 ORTHO05D003816 4.0e-09 67.0 286 23.8
RcHm_v2.0_Chr6g0270121 Rosa chinensis HOM05D000650 ORTHO05D007302 4.0e-09 67.0 189 28.0
Haze_10689 Corylus avellana HOM05D000650 ORTHO05D007302 5.2e-09 66.6 173 34.1
Haze_10691 Corylus avellana HOM05D000650 ORTHO05D007302 5.2e-09 66.6 173 34.1
Hma1.2p1_0028F.1_g017630 Hydrangea macrophylla HOM05D003426 ORTHO05D003816 6.8e-09 66.2 333 28.8
Os09g0421600 Oryza sativa ssp. japonica HOM05D015084 ORTHO05D015160 8.9e-09 65.9 184 25.5
AUR62025323 Chenopodium quinoa HOM05D003426 ORTHO05D003816 1.2e-08 65.5 430 23.0
EL10Ac2g02492 Beta vulgaris HOM05D016866 ORTHO05D003816 1.5e-08 65.1 97 38.1
DCAR_001849 Daucus carota HOM05D000650 ORTHO05D007302 1.5e-08 65.1 250 26.8
DCAR_029285 Daucus carota HOM05D000650 ORTHO05D007302 1.5e-08 65.1 174 26.4
Lj7P460T26 Lonicera japonica HOM05D003426 ORTHO05D003816 1.5e-08 65.1 132 33.3
MD02G1006400 Malus domestica HOM05D003426 ORTHO05D003816 1.5e-08 65.1 238 28.2
Hund02603 Selenicereus undatus HOM05D005220 ORTHO05D006082 1.5e-08 65.1 309 26.5
HPP92_009883 Vanilla planifolia HOM05D005220 ORTHO05D006082 1.5e-08 65.1 191 26.7
VMungo0251G0586 Vigna mungo HOM05D000650 ORTHO05D007302 1.5e-08 65.1 114 35.1
Psat7g133400 Pisum sativum HOM05D005220 ORTHO05D006082 2.0e-08 64.7 201 29.9
Gohir.D07G074000 Gossypium hirsutum HOM05D005220 ORTHO05D006082 2.6e-08 64.3 185 28.1
Gorai.001G078200 Gossypium raimondii HOM05D005220 ORTHO05D006082 2.6e-08 64.3 185 28.1
Lalb_Chr23g0273001 Lupinus albus HOM05D005220 ORTHO05D006082 2.6e-08 64.3 180 30.0
Potri.006G182601 Populus trichocarpa HOM05D003426 ORTHO05D003816 2.6e-08 64.3 345 25.8
Haze_10697 Corylus avellana HOM05D000650 ORTHO05D007302 3.4e-08 63.9 103 36.9
Gohir.A03G178000 Gossypium hirsutum HOM05D000650 ORTHO05D007302 3.4e-08 63.9 175 28.6
Medtr3g023750 Medicago truncatula HOM05D005220 ORTHO05D006082 3.4e-08 63.9 201 29.4
PSO210G1729 Papaver somniferum HOM05D003426 ORTHO05D003816 3.4e-08 63.9 322 27.0
Phvul.002G214600 Phaseolus vulgaris HOM05D000650 ORTHO05D007302 3.4e-08 63.9 152 33.6
AUR62028339 Chenopodium quinoa HOM05D003426 ORTHO05D003816 4.4e-08 63.5 353 24.9
Gorai.005G226700 Gossypium raimondii HOM05D000650 ORTHO05D007302 4.4e-08 63.5 176 28.4
PSO210G2240 Papaver somniferum HOM05D003426 ORTHO05D003816 4.4e-08 63.5 325 27.1
PSO561G0041 Papaver somniferum HOM05D003426 ORTHO05D003816 4.4e-08 63.5 127 32.3
QL11p025817 Quercus lobata HOM05D000650 ORTHO05D007302 4.4e-08 63.5 169 29.0
Dinv24138 Davidia involucrata HOM05D000650 ORTHO05D007302 5.8e-08 63.2 173 30.1
TAR636G1172 Trochodendron aralioides HOM05D003426 ORTHO05D003816 5.8e-08 63.2 222 32.4
Aqoxy3G03583 Aquilegia oxysepala HOM05D005220 ORTHO05D006082 7.5e-08 62.8 238 26.9
Thhalv10003587m.g Eutrema salsugineum HOM05D001456 ORTHO05D002799 7.5e-08 62.8 265 24.5
MBI14_g30955_MAGBIO Magnolia biondii HOM05D003426 ORTHO05D003816 7.5e-08 62.8 370 27.6
PSO111G0039 Papaver somniferum HOM05D003426 ORTHO05D003816 7.5e-08 62.8 102 33.3
Sed0005854 Sechium edule HOM05D005220 ORTHO05D006082 7.5e-08 62.8 251 23.9
Lj9C718T11 Lonicera japonica HOM05D003426 ORTHO05D003816 9.8e-08 62.4 379 26.6
Os09g0421700 Oryza sativa ssp. japonica HOM05D015084 ORTHO05D015160 9.8e-08 62.4 201 27.4
TWI59G0327 Tripterygium wilfordii HOM05D000650 ORTHO05D007302 9.8e-08 62.4 128 29.7
TAR626G1511 Trochodendron aralioides HOM05D003426 ORTHO05D003816 9.8e-08 62.4 326 27.0
ClCG06G015820 Citrullus lanatus HOM05D005220 ORTHO05D006082 1.3e-07 62.0 213 26.8
Haze_19169 Corylus avellana HOM05D003426 ORTHO05D003816 1.3e-07 62.0 196 29.6
Hma1.2p1_2680F.1_g326790 Hydrangea macrophylla HOM05D003426 ORTHO05D003816 1.3e-07 62.0 168 29.2
Rhsim11G0141100 Rhododendron simsii HOM05D000650 ORTHO05D007302 1.3e-07 62.0 102 36.3
Potri.009G078500 Populus trichocarpa HOM05D000650 ORTHO05D007302 1.7e-07 61.6 197 24.4
PGR142G3879 Punica granatum HOM05D003426 ORTHO05D003816 1.7e-07 61.6 208 25.5
Rhsim01G0028100 Rhododendron simsii HOM05D003426 ORTHO05D003816 1.7e-07 61.6 179 29.1
Aqoxy6G00819 Aquilegia oxysepala HOM05D000650 ORTHO05D000735 2.2e-07 61.2 265 24.2
Cpa.g.sc46.169 Carica papaya HOM05D003426 ORTHO05D003816 2.2e-07 61.2 183 30.1
CiPaw.16G108300 Carya illinoinensis HOM05D003426 ORTHO05D003816 2.2e-07 61.2 281 27.8
Haze_10696 Corylus avellana HOM05D000650 ORTHO05D007302 2.2e-07 61.2 245 29.4
Duzib248G1171 Durio zibethinus HOM05D000650 ORTHO05D007302 2.2e-07 61.2 202 27.2
Lj4g0012325 Lotus japonicus HOM05D000650 ORTHO05D007302 2.2e-07 61.2 220 25.5
Manes.10G096200 Manihot esculenta HOM05D000650 ORTHO05D014428 2.2e-07 61.2 196 25.5
Ah.09g228830 Amaranthus hybridus HOM05D006517 ORTHO05D007886 2.9e-07 60.8 171 27.5
Cpa.g.sc20.26 Carica papaya HOM05D000650 ORTHO05D000735 2.9e-07 60.8 226 28.8
COL.COLO4_32413 Corchorus olitorius HOM05D000027 ORTHO05D001579 2.9e-07 60.8 105 35.2
Lsat_1_v5_gn_5_21960 Lactuca sativa HOM05D005220 ORTHO05D006082 2.9e-07 60.8 185 25.4
RcHm_v2.0_Chr6g0270151 Rosa chinensis HOM05D000650 ORTHO05D007302 2.9e-07 60.8 184 28.8
Thecc.03G097300 Theobroma cacao HOM05D005220 ORTHO05D006082 2.9e-07 60.8 200 27.0
vmacro16795 Vaccinium macrocarpon HOM05D003426 ORTHO05D003816 2.9e-07 60.8 234 28.2
CANSAT54G0504 Cannabis sativa HOM05D000650 ORTHO05D007302 3.7e-07 60.5 218 28.0
Ciclev10020317m.g Citrus clementina HOM05D005220 ORTHO05D006082 3.7e-07 60.5 208 27.9
AT5G61190 Arabidopsis thaliana HOM05D001456 ORTHO05D002799 4.9e-07 60.1 235 23.0
CAN.G160.49 Capsicum annuum HOM05D003426 ORTHO05D003816 4.9e-07 60.1 372 26.1
Haze_07684 Corylus avellana HOM05D005220 ORTHO05D006082 4.9e-07 60.1 205 24.4
Dinv42844 Davidia involucrata HOM05D003426 ORTHO05D003816 4.9e-07 60.1 304 25.3
Dinv43256 Davidia involucrata HOM05D003426 ORTHO05D003816 4.9e-07 60.1 304 25.3
CANSAT11G1136 Cannabis sativa HOM05D003426 ORTHO05D003816 6.4e-07 59.7 188 29.3
Lj5A228T44 Lonicera japonica HOM05D003426 ORTHO05D007302 6.4e-07 59.7 205 28.3
Nitab4.5_0004586g0030 Nicotiana tabacum HOM05D000650 ORTHO05D007302 6.4e-07 59.7 170 30.0
Oeu026460.1 Olea europaea HOM05D003426 ORTHO05D003816 6.4e-07 59.7 352 24.1
Prupe.5G201200 Prunus persica HOM05D005220 ORTHO05D006082 6.4e-07 59.7 186 26.9
QL12p012133 Quercus lobata HOM05D006954 ORTHO05D008729 6.4e-07 59.7 217 24.0
TWI14G0488 Tripterygium wilfordii HOM05D000650 ORTHO05D007302 6.4e-07 59.7 123 29.3
Actinidia10526 Actinidia chinensis HOM05D003426 ORTHO05D003816 8.3e-07 59.3 217 26.3
MSTRG.6152 Avicennia marina HOM05D003426 ORTHO05D003816 8.3e-07 59.3 394 26.1
Cc06_g14810 Coffea canephora HOM05D003426 ORTHO05D003816 8.3e-07 59.3 335 27.2
Duzib132G0086 Durio zibethinus HOM05D000650 ORTHO05D007302 8.3e-07 59.3 170 26.5
Manes.07G043000 Manihot esculenta HOM05D000650 ORTHO05D007302 8.3e-07 59.3 167 26.9
QL11p029380 Quercus lobata HOM05D000650 ORTHO05D007302 8.3e-07 59.3 187 31.0
Sabra06G0139100 Salix brachista HOM05D003426 ORTHO05D003816 8.3e-07 59.3 187 28.9
THA.LOC104803917 Tarenaya hassleriana HOM05D003426 ORTHO05D003816 8.3e-07 59.3 351 27.6
Atru.chr6.1308 Acer truncatum HOM05D000650 ORTHO05D007302 1.1e-06 58.9 125 27.2
Aa31LG11G2160 Aethionema arabicum HOM05D001456 ORTHO05D002799 1.1e-06 58.9 239 23.4
arahy.Tifrunner.gnm1.ann1.Y71GGS Arachis hypogaea HOM05D005220 ORTHO05D006082 1.1e-06 58.9 191 27.2
MSTRG.26266 Avicennia marina HOM05D003426 ORTHO05D003816 1.1e-06 58.9 407 24.8
Nitab4.5_0004586g0040 Nicotiana tabacum HOM05D000650 ORTHO05D007302 1.1e-06 58.9 224 27.2
QL11p025811 Quercus lobata HOM05D000650 ORTHO05D007302 1.1e-06 58.9 172 26.7
TPR.G12226 Trifolium pratense HOM05D005220 ORTHO05D006082 1.1e-06 58.9 225 28.0
CSS0023548 Camellia sinensis var. sinensis HOM05D003426 ORTHO05D007302 1.4e-06 58.5 179 27.9
Cpa.g.sc94.10 Carica papaya HOM05D005220 ORTHO05D006082 1.4e-06 58.5 189 24.3
Lj4g0020146 Lotus japonicus HOM05D000650 ORTHO05D007302 1.4e-06 58.5 197 29.4
Nitab4.5_0005869g0080 Nicotiana tabacum HOM05D003426 ORTHO05D003816 1.4e-06 58.5 170 28.2
TWI34G0373 Tripterygium wilfordii HOM05D003426 ORTHO05D003816 1.4e-06 58.5 340 25.3
Cfa020810 Carpinus fangiana HOM05D003426 ORTHO05D003816 1.9e-06 58.2 368 25.5
AUR62024799 Chenopodium quinoa HOM05D016866 ORTHO05D003816 1.9e-06 58.2 141 29.8
ECA233G0962 Erigeron canadensis HOM05D006954 ORTHO05D008729 1.9e-06 58.2 178 25.3
FAN08G2293 Fragaria x ananassa HOM05D005220 ORTHO05D006082 1.9e-06 58.2 175 28.6
FAN15G2135 Fragaria x ananassa HOM05D000650 ORTHO05D007302 1.9e-06 58.2 186 29.0
RcHm_v2.0_Chr6g0270171 Rosa chinensis HOM05D000650 ORTHO05D007302 1.9e-06 58.2 203 24.6
Eucgr.C00251 Eucalyptus grandis HOM05D003426 ORTHO05D003816 2.4e-06 57.8 152 30.9
Os06g0651300 Oryza sativa ssp. japonica HOM05D003426 ORTHO05D003816 2.4e-06 57.8 162 27.8
SGA_v2.0_scaffold265G46098 Striga asiatica HOM05D003426 ORTHO05D003816 2.4e-06 57.8 124 33.9
Actinidia02402 Actinidia chinensis HOM05D000650 ORTHO05D007302 3.2e-06 57.4 206 28.6
HanXRQChr06g0168891 Helianthus annuus HOM05D006954 ORTHO05D008729 3.2e-06 57.4 117 30.8
HanXRQChr06g0169051 Helianthus annuus HOM05D006954 ORTHO05D008729 3.2e-06 57.4 117 30.8
Lj5A228T42 Lonicera japonica HOM05D000650 ORTHO05D007302 3.2e-06 57.4 219 26.9
Manes.06G035400 Manihot esculenta HOM05D003426 ORTHO05D003816 3.2e-06 57.4 360 27.2
QL11p025849 Quercus lobata HOM05D000650 ORTHO05D007302 3.2e-06 57.4 182 26.4
AL8G37850 Arabidopsis lyrata HOM05D001456 ORTHO05D002799 4.1e-06 57.0 239 23.4
ECA236G2514 Erigeron canadensis HOM05D003426 ORTHO05D003816 4.1e-06 57.0 256 26.2
Lj4g0020470 Lotus japonicus HOM05D000650 ORTHO05D007302 4.1e-06 57.0 219 25.1
Nitab4.5_0001571g0080 Nicotiana tabacum HOM05D003426 ORTHO05D003816 4.1e-06 57.0 172 28.5
SGA_v2.0_scaffold11G05525 Striga asiatica HOM05D006954 ORTHO05D008729 4.1e-06 57.0 246 26.4
Migut.J01365 Erythranthe guttata HOM05D003426 ORTHO05D003816 5.4e-06 56.6 164 30.5
Lsat_1_v5_gn_5_90301 Lactuca sativa HOM05D003426 ORTHO05D003816 5.4e-06 56.6 98 34.7
PSO675G1450 Papaver somniferum HOM05D003426 ORTHO05D003816 5.4e-06 56.6 241 27.8
PGSC0003DMG400025138 Solanum tuberosum HOM05D005220 ORTHO05D006082 5.4e-06 56.6 226 24.8
Thecc.02G127100 Theobroma cacao HOM05D000650 ORTHO05D007302 5.4e-06 56.6 209 28.2
GSVIVG01016047001 Vitis vinifera HOM05D003426 ORTHO05D003816 5.4e-06 56.6 100 36.0
Zm00001eb388770 Zea mays HOM05D003426 ORTHO05D003816 5.4e-06 56.6 149 29.5
Ca_18401_v3 Cicer arietinum L. HOM05D000650 ORTHO05D007302 7.1e-06 56.2 178 29.2
Manes.07G043100 Manihot esculenta HOM05D000650 ORTHO05D015160 7.1e-06 56.2 162 26.5
Peaxi162Scf00003g03237 Petunia axillaris HOM05D021013 ORTHO05D007302 7.1e-06 56.2 129 30.2
MELO3C017209.2 Cucumis melo HOM05D005220 ORTHO05D006082 9.2e-06 55.8 278 23.7
MD17G1259500 Malus domestica HOM05D003426 ORTHO05D003816 9.2e-06 55.8 182 28.6
Nn1g05634 Nelumbo nucifera HOM05D000650 ORTHO05D000735 9.2e-06 55.8 238 24.4
SGA_v2.0_scaffold83G26387 Striga asiatica HOM05D000650 ORTHO05D000735 9.2e-06 55.8 192 27.1


User provided reference genes

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