Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE02G1967 Ceratophyllum demersum HOM05D005404 ORTHO05D006623 2.2e-51 205.7 129 100.0
Duzib101G0001 Durio zibethinus HOM05D005404 ORTHO05D006623 8.8e-45 183.7 129 80.6
Duzib192G1075 Durio zibethinus HOM05D005404 ORTHO05D006623 8.8e-45 183.7 129 80.6
Gohir.A10G038300 Gossypium hirsutum HOM05D005404 ORTHO05D006623 2.0e-44 182.6 129 79.8
VMungo0251G2631 Vigna mungo HOM05D005404 ORTHO05D006623 2.0e-44 182.6 129 79.1
Hund21493 Selenicereus undatus HOM05D005404 ORTHO05D006623 3.3e-44 181.8 129 79.1
Gohir.D10G039300 Gossypium hirsutum HOM05D005404 ORTHO05D006623 5.7e-44 181.0 129 79.1
Gorai.011G041300 Gossypium raimondii HOM05D005404 ORTHO05D006623 5.7e-44 181.0 129 79.1
Thecc.06G156200 Theobroma cacao HOM05D005404 ORTHO05D006623 7.5e-44 180.6 129 78.3
Lalb_Chr12g0208831 Lupinus albus HOM05D005404 ORTHO05D006623 1.3e-43 179.9 129 81.4
Manes.15G118100 Manihot esculenta HOM05D005404 ORTHO05D006623 1.3e-43 179.9 129 86.0
Potri.001G352600 Populus trichocarpa HOM05D005404 ORTHO05D006623 1.3e-43 179.9 129 78.3
HanXRQChr11g0340931 Helianthus annuus HOM05D005404 ORTHO05D006623 2.2e-43 179.1 129 79.1
Duzib160G0646 Durio zibethinus HOM05D005404 ORTHO05D006623 2.8e-43 178.7 129 77.5
Ciclev10017167m.g Citrus clementina HOM05D005404 ORTHO05D006623 3.7e-43 178.3 130 78.5
PSO017G4964 Papaver somniferum HOM05D005404 ORTHO05D006623 4.8e-43 177.9 127 78.7
Eucgr.E02375 Eucalyptus grandis HOM05D005404 ORTHO05D006623 6.3e-43 177.6 129 76.7
Duzib235G1537 Durio zibethinus HOM05D005404 ORTHO05D006623 8.2e-43 177.2 129 77.5
TAR626G1892 Trochodendron aralioides HOM05D005404 ORTHO05D006623 8.2e-43 177.2 127 77.2
Actinidia39556 Actinidia chinensis HOM05D005404 ORTHO05D006623 1.1e-42 176.8 129 86.0
Nn3g20867 Nelumbo nucifera HOM05D005404 ORTHO05D006623 1.4e-42 176.4 130 86.9
QL05p060078 Quercus lobata HOM05D005404 ORTHO05D006623 1.8e-42 176.0 128 85.9
MELO3C007159.2 Cucumis melo HOM05D005404 ORTHO05D006623 2.4e-42 175.6 129 76.0
CsaV3_6G051470 Cucumis sativus L. HOM05D005404 ORTHO05D006623 2.4e-42 175.6 129 76.0
EL10Ac8g19776 Beta vulgaris HOM05D005404 ORTHO05D006623 3.1e-42 175.3 129 76.0
Lj4g0012372 Lotus japonicus HOM05D005404 ORTHO05D006623 3.1e-42 175.3 129 75.2
Atru.chr10.1368 Acer truncatum HOM05D005404 ORTHO05D006623 4.1e-42 174.9 129 82.9
arahy.Tifrunner.gnm1.ann1.HITJ74 Arachis hypogaea HOM05D005404 ORTHO05D006623 4.1e-42 174.9 129 75.2
CiPaw.09G128300 Carya illinoinensis HOM05D005404 ORTHO05D006623 4.1e-42 174.9 127 79.5
PSO170G1289 Papaver somniferum HOM05D005404 ORTHO05D006623 4.1e-42 174.9 127 77.2
Phvul.002G197500 Phaseolus vulgaris HOM05D005404 ORTHO05D006623 5.3e-42 174.5 129 76.0
Sed0003587 Sechium edule HOM05D005404 ORTHO05D006623 7.0e-42 174.1 129 76.0
TWI53G0717 Tripterygium wilfordii HOM05D005404 ORTHO05D006623 7.0e-42 174.1 131 76.3
Aqoxy4G00127 Aquilegia oxysepala HOM05D005404 ORTHO05D006623 1.2e-41 173.3 128 78.1
CANSAT35G0205 Cannabis sativa HOM05D005404 ORTHO05D006623 1.2e-41 173.3 129 75.2
PGR042G3093 Punica granatum HOM05D005404 ORTHO05D006623 1.2e-41 173.3 129 76.0
Sc05g0006520 Simmondsia chinensis HOM05D005404 ORTHO05D006623 1.2e-41 173.3 129 76.7
Ca_18287_v3 Cicer arietinum L. HOM05D005404 ORTHO05D006623 2.0e-41 172.6 129 74.4
Solyc02g071150.3 Solanum lycopersicum HOM05D005404 ORTHO05D006623 2.0e-41 172.6 129 74.4
Sopen02g020230 Solanum pennellii HOM05D005404 ORTHO05D006623 2.0e-41 172.6 129 74.4
Glyma.05G127400 Glycine max HOM05D005404 ORTHO05D006623 4.5e-41 171.4 130 76.2
CDE08G1548 Ceratophyllum demersum HOM05D005404 ORTHO05D006623 5.9e-41 171.0 112 87.5
DCAR_007905 Daucus carota HOM05D005404 ORTHO05D006623 7.7e-41 170.6 128 76.6
FAN21G0592 Fragaria x ananassa HOM05D005404 ORTHO05D006623 1.0e-40 170.2 132 75.0
Glyma.08G082100 Glycine max HOM05D005404 ORTHO05D006623 1.7e-40 169.5 130 75.4
MD05G1290500 Malus domestica HOM05D005404 ORTHO05D006623 2.2e-40 169.1 133 73.7
Manes.17G066000 Manihot esculenta HOM05D005404 ORTHO05D006623 2.2e-40 169.1 129 80.6
Nitab4.5_0000206g0130 Nicotiana tabacum HOM05D005404 ORTHO05D006623 2.2e-40 169.1 127 73.2
MD16G1202800 Malus domestica HOM05D005404 ORTHO05D006623 2.9e-40 168.7 133 73.7
Carub.0001s2809 Capsella rubella HOM05D005404 ORTHO05D006623 3.8e-40 168.3 126 74.6
ECA248G0679 Erigeron canadensis HOM05D005404 ORTHO05D006623 5.0e-40 167.9 129 83.7
Peaxi162Scf00482g00049 Petunia axillaris HOM05D005404 ORTHO05D006623 5.0e-40 167.9 129 72.1
Prupe.4G075200 Prunus persica HOM05D005404 ORTHO05D006623 6.5e-40 167.5 133 72.9
THA.LOC104812663 Tarenaya hassleriana HOM05D005404 ORTHO05D006623 8.5e-40 167.2 126 74.6
BcaB07g32570 Brassica carinata HOM05D005404 ORTHO05D006623 1.1e-39 166.8 129 75.2
Os05g0547850 Oryza sativa ssp. japonica HOM05D005404 ORTHO05D006623 1.1e-39 166.8 129 74.4
Medtr4g094580 Medicago truncatula HOM05D005404 ORTHO05D006623 1.9e-39 166.0 130 73.1
BcaC06g35468 Brassica carinata HOM05D005404 ORTHO05D006623 5.5e-39 164.5 129 74.4
C05p28570 Brassica napus HOM05D005404 ORTHO05D006623 5.5e-39 164.5 129 74.4
COL.COLO4_07492 Corchorus olitorius HOM05D005404 ORTHO05D006623 5.5e-39 164.5 116 80.2
Nn4g26481 Nelumbo nucifera HOM05D005404 ORTHO05D006623 5.5e-39 164.5 150 65.3
SGA_v2.0_scaffold333G49013 Striga asiatica HOM05D005404 ORTHO05D006623 5.5e-39 164.5 125 72.8
BcaB03g13855 Brassica carinata HOM05D005404 ORTHO05D006623 7.2e-39 164.1 129 74.4
BcaC01g00143 Brassica carinata HOM05D005404 ORTHO05D006623 7.2e-39 164.1 129 74.4
SalBow7G3345 Salvia bowleyana HOM05D005404 ORTHO05D006623 7.2e-39 164.1 125 80.8
BcaB03g12183 Brassica carinata HOM05D005404 ORTHO05D006623 9.4e-39 163.7 130 73.1
A08p24810 Brassica napus HOM05D003390 ORTHO05D004189 1.2e-38 163.3 127 74.8
BolC5t31581H Brassica oleracea HOM05D005404 ORTHO05D006623 1.2e-38 163.3 128 73.4
Thhalv10009098m.g Eutrema salsugineum HOM05D005404 ORTHO05D006623 1.2e-38 163.3 129 72.9
Oeu012458.1 Olea europaea HOM05D005404 ORTHO05D006623 1.2e-38 163.3 125 82.4
CARHR029600 Cardamine hirsuta HOM05D005404 ORTHO05D006623 1.6e-38 162.9 129 72.9
Sp1g25740 Schrenkiella parvula HOM05D005404 ORTHO05D006623 1.6e-38 162.9 129 73.6
Lsat_1_v5_gn_1_91580 Lactuca sativa HOM05D005404 ORTHO05D006623 2.1e-38 162.5 130 79.2
BcaC05g26997 Brassica carinata HOM05D005404 ORTHO05D006623 2.7e-38 162.2 129 72.9
Rhsim02G0154900 Rhododendron simsii HOM05D005404 ORTHO05D006623 6.1e-38 161.0 116 78.4
Migut.H01386 Erythranthe guttata HOM05D005404 ORTHO05D006623 1.0e-37 160.2 128 72.7
GSVIVG01021395001 Vitis vinifera HOM05D005404 ORTHO05D006623 1.4e-37 159.8 116 77.6
Sabra16G0231900 Salix brachista HOM05D005404 ORTHO05D006623 1.8e-37 159.5 160 61.2
Dinv32291 Davidia involucrata HOM05D005404 ORTHO05D006623 2.3e-37 159.1 116 84.5
TAR627G1065 Trochodendron aralioides HOM05D005404 ORTHO05D006623 2.3e-37 159.1 117 75.2
MSTRG.16208 Avicennia marina HOM05D005404 ORTHO05D006623 4.0e-37 158.3 127 68.5
FAN25G0636 Fragaria x ananassa HOM05D005404 ORTHO05D006623 6.8e-37 157.5 130 81.5
FAN25G2540 Fragaria x ananassa HOM05D005404 ORTHO05D006623 6.8e-37 157.5 130 81.5
MBI07_g07833_MAGBIO Magnolia biondii HOM05D005404 ORTHO05D006623 8.8e-37 157.1 116 75.9
THA.LOC104814282 Tarenaya hassleriana HOM05D005404 ORTHO05D006623 8.8e-37 157.1 127 81.1
unitig_26.g10094 Utricularia gibba HOM05D005404 ORTHO05D006623 8.8e-37 157.1 127 68.5
RcHm_v2.0_Chr5g0013081 Rosa chinensis HOM05D005404 ORTHO05D006623 1.5e-36 156.4 132 79.5
Cc00_g15980 Coffea canephora HOM05D005404 ORTHO05D006623 2.0e-36 156.0 116 75.9
Zm00001eb294640 Zea mays HOM05D005404 ORTHO05D006623 4.4e-36 154.8 130 75.4
ATR0681G149 Amborella trichopoda HOM05D005404 ORTHO05D006623 1.3e-35 153.3 114 76.3
Psat7g091480 Pisum sativum HOM05D005404 ORTHO05D006623 1.3e-35 153.3 116 73.3
BolC7t42063H Brassica oleracea HOM05D005404 ORTHO05D006623 1.7e-35 152.9 121 72.7
BraA07t28813Z Brassica rapa HOM05D005404 ORTHO05D006623 1.7e-35 152.9 123 73.2
Haze_05531 Corylus avellana HOM05D005404 ORTHO05D006623 1.7e-35 152.9 116 74.1
DCAR_003948 Daucus carota HOM05D005404 ORTHO05D006623 1.7e-35 152.9 117 76.1
TWI09G1218 Tripterygium wilfordii HOM05D005404 ORTHO05D006623 2.2e-35 152.5 112 83.0
FAN11G2394 Fragaria x ananassa HOM05D005404 ORTHO05D006623 3.7e-35 151.8 119 74.8
A07p10200 Brassica napus HOM05D005404 ORTHO05D006623 4.8e-35 151.4 119 73.1
AL1G43680 Arabidopsis lyrata HOM05D005404 ORTHO05D006623 8.3e-35 150.6 130 71.5
BolC3t19881H Brassica oleracea HOM05D005404 ORTHO05D006623 8.3e-35 150.6 121 71.9
BraA08t34436Z Brassica rapa HOM05D003390 ORTHO05D004189 8.3e-35 150.6 119 72.3
Lj2A310T44 Lonicera japonica HOM05D005404 ORTHO05D006623 8.3e-35 150.6 116 85.3
AUR62027578 Chenopodium quinoa HOM05D005404 ORTHO05D006623 1.4e-34 149.8 132 78.8
FAN16G2304 Fragaria x ananassa HOM05D005404 ORTHO05D006623 2.4e-34 149.1 132 78.0
AT1G29850 Arabidopsis thaliana HOM05D005404 ORTHO05D006623 5.4e-34 147.9 129 76.7
CAN.G257.34 Capsicum annuum HOM05D005404 ORTHO05D006623 7.0e-34 147.5 127 74.8
AUR62035781 Chenopodium quinoa HOM05D005404 ORTHO05D006623 2.0e-33 146.0 132 77.3
Oeu046548.1 Olea europaea HOM05D005404 ORTHO05D006623 1.7e-32 142.9 114 80.7
PGSC0003DMG400003081 Solanum tuberosum HOM05D005404 ORTHO05D006623 1.7e-32 142.9 129 74.4
FvH4_3g06230 Fragaria vesca HOM05D005404 ORTHO05D006623 3.8e-32 141.7 119 81.5
Hma1.2p1_0015F.1_g010240 Hydrangea macrophylla HOM05D005404 ORTHO05D006623 1.9e-31 139.4 152 58.6
Nitab4.5_0008782g0030 Nicotiana tabacum HOM05D005404 ORTHO05D006623 1.9e-31 139.4 127 70.1
Zm00001eb342640 Zea mays HOM05D005404 ORTHO05D006623 5.5e-31 137.9 131 74.8
AUR62023445 Chenopodium quinoa HOM05D005404 ORTHO05D006623 3.4e-28 128.6 85 82.4
MSTRG.14760 Avicennia marina HOM05D005404 ORTHO05D006623 9.8e-28 127.1 110 67.3
MD09G1183100 Malus domestica HOM05D005404 ORTHO05D006623 9.8e-28 127.1 82 86.6
AagrBONN_evm.TU.Sc2ySwM_362.2923 Anthoceros agrestis HOM05D005404 ORTHO05D006623 3.7e-27 125.2 80 83.8
Pp3c14_19320 Physcomitrium patens HOM05D005404 ORTHO05D006623 6.3e-27 124.4 136 67.6
Mapoly0080s0013 Marchantia polymorpha HOM05D005404 ORTHO05D006623 1.1e-26 123.6 136 68.4
SMO358G0232 Selaginella moellendorffii HOM05D005404 ORTHO05D006623 5.4e-26 121.3 126 67.5
Peaxi162Scf00121g02445 Petunia axillaris HOM05D005404 ORTHO05D006623 2.7e-25 119.0 127 59.8
Oeu052389.2 Olea europaea HOM05D005404 ORTHO05D006623 1.3e-24 116.7 110 64.5
Cpa.g.sc17.100 Carica papaya HOM05D005404 ORTHO05D006623 2.9e-24 115.5 66 95.5
Aa31LG6G5780 Aethionema arabicum HOM05D005404 ORTHO05D006623 8.6e-24 114.0 94 70.2
Os05g0546500 Oryza sativa ssp. japonica HOM05D005404 ORTHO05D006623 2.5e-23 112.5 70 90.0
TAR636G3446 Trochodendron aralioides HOM05D005404 ORTHO05D006623 1.2e-22 110.2 83 74.7
arahy.Tifrunner.gnm1.ann1.JSLQ1D Arachis hypogaea HOM05D005404 ORTHO05D006623 2.1e-22 109.4 68 86.8
CBR_g45965 Chara braunii HOM05D005404 ORTHO05D006623 1.5e-20 103.2 83 67.5
SEGI_04398 Sequoiadendron giganteum HOM05D005404 ORTHO05D006623 2.6e-20 102.4 68 83.8
ClCG01G024320 Citrullus lanatus HOM05D005404 ORTHO05D006623 2.9e-19 99.0 129 49.6
C07p15720 Brassica napus HOM05D005404 ORTHO05D006623 3.7e-19 98.6 86 67.4
Nitab4.5_0003527g0030 Nicotiana tabacum HOM05D005404 ORTHO05D006623 4.6e-17 91.7 58 86.2
C03p76250 Brassica napus HOM05D005404 ORTHO05D006623 3.9e-16 88.6 51 92.2
Cre12.g557800 Chlamydomonas reinhardtii HOM05D005404 ORTHO05D006623 3.9e-16 88.6 88 56.8
PRCOL_00005423 Prasinoderma coloniale HOM05D005404 ORTHO05D006623 5.0e-16 88.2 87 55.2
HPP92_021557 Vanilla planifolia HOM05D005404 ORTHO05D006623 3.3e-15 85.5 54 87.0
Nitab4.5_0010964g0060 Nicotiana tabacum HOM05D000728 ORTHO05D001474 3.6e-14 82.0 270 31.9
CSS0048314 Camellia sinensis var. sinensis HOM05D005404 ORTHO05D006623 4.0e-13 78.6 75 66.7
arahy.Tifrunner.gnm1.ann1.HCY9BB Arachis hypogaea HOM05D005404 ORTHO05D006623 5.4e-10 68.2 59 61.0
A09p36640 Brassica napus HOM05D005404 ORTHO05D006623 3.0e-08 62.4 64 59.4
HPP92_021556 Vanilla planifolia HOM05D000864 ORTHO05D001658 6.6e-08 61.2 59 55.9
Nn4g23354 Nelumbo nucifera HOM05D005404 ORTHO05D006623 8.6e-08 60.8 40 85.0


User provided reference genes

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