Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE02G1604 Ceratophyllum demersum HOM05D006330 ORTHO05D008013 2.8e-174 615.1 310 100.0
MBI10_g35385_MAGBIO Magnolia biondii HOM05D006330 ORTHO05D008013 1.6e-121 439.9 302 77.5
TAR362G0826 Trochodendron aralioides HOM05D006330 ORTHO05D008013 1.6e-121 439.9 307 74.6
HPP92_007591 Vanilla planifolia HOM05D006330 ORTHO05D008013 5.3e-120 434.9 276 78.3
GSVIVG01001532001 Vitis vinifera HOM05D006330 ORTHO05D008013 7.6e-119 431.0 292 77.4
Nn7g37444 Nelumbo nucifera HOM05D006330 ORTHO05D008013 1.9e-117 426.4 307 74.3
Aqoxy2G02383 Aquilegia oxysepala HOM05D006330 ORTHO05D008013 5.5e-117 424.9 277 77.6
QL09p047707 Quercus lobata HOM05D006330 ORTHO05D008013 5.5e-117 424.9 291 76.3
Gohir.A11G143900 Gossypium hirsutum HOM05D006330 ORTHO05D008013 3.5e-116 422.2 316 71.5
Gorai.007G161200 Gossypium raimondii HOM05D006330 ORTHO05D008013 3.5e-116 422.2 316 70.3
Thecc.01G207700 Theobroma cacao HOM05D006330 ORTHO05D008013 3.5e-116 422.2 257 82.5
CiPaw.13G055600 Carya illinoinensis HOM05D006330 ORTHO05D008013 4.6e-116 421.8 303 74.3
Manes.12G055500 Manihot esculenta HOM05D006330 ORTHO05D008013 4.6e-116 421.8 300 73.0
Haze_03505 Corylus avellana HOM05D006330 ORTHO05D008013 1.0e-115 420.6 308 73.4
Prupe.8G187200 Prunus persica HOM05D006330 ORTHO05D008013 1.3e-115 420.2 316 71.2
Actinidia23802 Actinidia chinensis HOM05D006330 ORTHO05D008013 1.8e-115 419.9 314 70.1
Gohir.D11G150300 Gossypium hirsutum HOM05D006330 ORTHO05D008013 2.3e-115 419.5 316 69.9
PSO675G8704 Papaver somniferum HOM05D006330 ORTHO05D008013 5.1e-115 418.3 309 71.8
Sc05g0001630 Simmondsia chinensis HOM05D006330 ORTHO05D008013 5.1e-115 418.3 306 72.5
PGR044G2230 Punica granatum HOM05D006330 ORTHO05D008013 1.1e-114 417.2 259 81.5
MELO3C021126.2 Cucumis melo HOM05D006330 ORTHO05D008013 2.5e-114 416.0 262 78.2
Cfa010572 Carpinus fangiana HOM05D006330 ORTHO05D008013 3.3e-114 415.6 271 79.0
Sopen09g015980 Solanum pennellii HOM05D006330 ORTHO05D008013 4.3e-114 415.2 314 72.0
ClCG09G008360 Citrullus lanatus HOM05D006330 ORTHO05D008013 7.4e-114 414.5 261 78.2
MD10G1148200 Malus domestica HOM05D006330 ORTHO05D008013 9.6e-114 414.1 318 71.1
CsaV3_7G026730 Cucumis sativus L. HOM05D006330 ORTHO05D008013 1.3e-113 413.7 262 77.5
FAN15G1514 Fragaria x ananassa HOM05D006330 ORTHO05D008013 1.3e-113 413.7 257 81.7
Duzib133G1456 Durio zibethinus HOM05D006330 ORTHO05D008013 1.6e-113 413.3 313 69.3
Potri.014G175500 Populus trichocarpa HOM05D006330 ORTHO05D008013 2.1e-113 412.9 271 79.0
Cc01_g15880 Coffea canephora HOM05D006330 ORTHO05D008013 4.8e-113 411.8 271 78.2
RcHm_v2.0_Chr6g0282221 Rosa chinensis HOM05D006330 ORTHO05D008013 6.2e-113 411.4 262 79.8
Actinidia34530 Actinidia chinensis HOM05D006330 ORTHO05D008013 2.4e-112 409.5 313 69.3
Eucgr.K02361 Eucalyptus grandis HOM05D006330 ORTHO05D008013 3.1e-112 409.1 300 71.0
ATR0743G141 Amborella trichopoda HOM05D006330 ORTHO05D008013 4.0e-112 408.7 304 72.4
CANSAT01G2136 Cannabis sativa HOM05D006330 ORTHO05D008013 6.9e-112 407.9 299 73.2
TWI36G1481 Tripterygium wilfordii HOM05D006330 ORTHO05D008013 1.2e-111 407.1 265 79.2
FvH4_2g17480 Fragaria vesca HOM05D006330 ORTHO05D008013 1.5e-111 406.8 257 80.2
Lj2C1112G6 Lonicera japonica HOM05D006330 ORTHO05D008013 1.5e-111 406.8 257 79.0
Ciclev10015989m.g Citrus clementina HOM05D006330 ORTHO05D008013 2.6e-111 406.0 270 76.7
THA.LOC104804704 Tarenaya hassleriana HOM05D006330 ORTHO05D008013 7.6e-111 404.4 301 70.8
Zm00001eb168340 Zea mays HOM05D006330 ORTHO05D008013 7.6e-111 404.4 263 76.8
Sed0009827 Sechium edule HOM05D006330 ORTHO05D008013 1.3e-110 403.7 263 77.2
FAN24G2605 Fragaria x ananassa HOM05D006330 ORTHO05D008013 1.7e-110 403.3 257 79.8
Psat4g208240 Pisum sativum HOM05D006330 ORTHO05D008013 8.4e-110 401.0 302 69.5
Os11g0247400 Oryza sativa ssp. japonica HOM05D006330 ORTHO05D008013 1.1e-109 400.6 263 76.8
EL10Ac5g10587 Beta vulgaris HOM05D006330 ORTHO05D008013 1.9e-109 399.8 296 71.3
Atru.chr6.3528 Acer truncatum HOM05D006330 ORTHO05D008013 5.5e-109 398.3 313 69.3
AUR62008069 Chenopodium quinoa HOM05D006330 ORTHO05D008013 5.5e-109 398.3 244 80.3
TPR.G17377 Trifolium pratense HOM05D006330 ORTHO05D008013 7.1e-109 397.9 290 71.7
arahy.Tifrunner.gnm1.ann1.3RIK1P Arachis hypogaea HOM05D006330 ORTHO05D008013 2.1e-108 396.4 248 80.6
SalBow3G0290 Salvia bowleyana HOM05D006330 ORTHO05D008013 2.1e-108 396.4 297 70.0
SGA_v2.0_scaffold231G43447 Striga asiatica HOM05D006330 ORTHO05D008013 2.7e-108 396.0 302 69.2
Lsat_1_v5_gn_9_16880 Lactuca sativa HOM05D006330 ORTHO05D008013 3.5e-108 395.6 306 68.6
HanXRQChr07g0190561 Helianthus annuus HOM05D006330 ORTHO05D008013 4.6e-108 395.2 303 67.7
arahy.Tifrunner.gnm1.ann1.84ZR2Z Arachis hypogaea HOM05D006330 ORTHO05D008013 6.0e-108 394.8 248 80.2
Rhsim01G0247700 Rhododendron simsii HOM05D006330 ORTHO05D008013 6.0e-108 394.8 244 79.5
Glyma.03G097100 Glycine max HOM05D006330 ORTHO05D008013 7.9e-108 394.4 289 71.6
VMungo0331G1131 Vigna mungo HOM05D006330 ORTHO05D008013 1.3e-107 393.7 241 82.6
MSTRG.21296 Avicennia marina HOM05D006330 ORTHO05D008013 2.3e-107 392.9 257 76.7
Phvul.010G036400 Phaseolus vulgaris HOM05D006330 ORTHO05D008013 2.3e-107 392.9 241 82.6
Migut.D00775 Erythranthe guttata HOM05D006330 ORTHO05D008013 3.0e-107 392.5 307 67.1
Lalb_Chr12g0210221 Lupinus albus HOM05D006330 ORTHO05D008013 5.1e-107 391.7 240 80.4
Glyma.07G124200 Glycine max HOM05D006330 ORTHO05D008013 6.7e-107 391.3 271 74.2
Ca_23158_v3 Cicer arietinum L. HOM05D006330 ORTHO05D008013 3.3e-106 389.0 273 73.6
ECA247G1307 Erigeron canadensis HOM05D006330 ORTHO05D008013 3.3e-106 389.0 262 73.3
Medtr8g010130 Medicago truncatula HOM05D006330 ORTHO05D008013 2.8e-105 386.0 279 71.3
DCAR_004774 Daucus carota HOM05D006330 ORTHO05D008013 4.8e-105 385.2 244 77.0
Hma1.2p1_0161F.1_g071650 Hydrangea macrophylla HOM05D006330 ORTHO05D008013 2.4e-104 382.9 240 79.6
Carub.0003s2579 Capsella rubella HOM05D006330 ORTHO05D008013 4.1e-104 382.1 269 72.5
vmacro14689 Vaccinium macrocarpon HOM05D006330 ORTHO05D008013 9.0e-104 380.9 253 75.1
Hund09482 Selenicereus undatus HOM05D006330 ORTHO05D008013 1.3e-102 377.1 226 82.7
Aa31sc18G40 Aethionema arabicum HOM05D006330 ORTHO05D008013 1.7e-102 376.7 298 67.4
AL3G41590 Arabidopsis lyrata HOM05D006330 ORTHO05D008013 2.2e-102 376.3 302 67.2
Thhalv10002617m.g Eutrema salsugineum HOM05D006330 ORTHO05D008013 9.3e-101 370.9 250 75.6
C03p54570 Brassica napus HOM05D006330 ORTHO05D008013 2.7e-100 369.4 250 75.2
BolC3t17744H Brassica oleracea HOM05D006330 ORTHO05D008013 2.7e-100 369.4 250 75.2
AT3G25470 Arabidopsis thaliana HOM05D006330 ORTHO05D008013 4.6e-100 368.6 300 66.0
Sp3g22990 Schrenkiella parvula HOM05D006330 ORTHO05D008013 6.1e-100 368.2 253 73.9
BraA03t13548Z Brassica rapa HOM05D006330 ORTHO05D008013 7.9e-100 367.9 250 75.2
BcaB08g34453 Brassica carinata HOM05D006330 ORTHO05D008013 1.3e-99 367.1 242 76.0
CARHR101770 Cardamine hirsuta HOM05D006330 ORTHO05D008013 1.8e-99 366.7 245 75.1
A03p44190 Brassica napus HOM05D006330 ORTHO05D008013 2.3e-99 366.3 250 74.8
Sabra14G0134300 Salix brachista HOM05D006330 ORTHO05D008013 6.7e-99 364.8 267 73.8
BcaC06g35817 Brassica carinata HOM05D006330 ORTHO05D008013 1.1e-98 364.0 242 75.6
A07p06930 Brassica napus HOM05D006330 ORTHO05D008013 1.5e-98 363.6 308 64.6
BraA07t28484Z Brassica rapa HOM05D006330 ORTHO05D008013 1.5e-98 363.6 308 64.6
COL.COLO4_34269 Corchorus olitorius HOM05D006330 ORTHO05D008013 2.5e-98 362.8 220 82.7
Ciclev10018050m.g Citrus clementina HOM05D006330 ORTHO05D008013 7.4e-98 361.3 234 78.2
BolC7t41520H Brassica oleracea HOM05D006330 ORTHO05D008013 2.8e-97 359.4 243 75.3
Pp3c24_1560 Physcomitrium patens HOM05D006330 ORTHO05D008013 3.7e-97 359.0 245 71.8
C07p10530 Brassica napus HOM05D006330 ORTHO05D008013 4.8e-97 358.6 243 75.3
Mapoly0006s0124 Marchantia polymorpha HOM05D006330 ORTHO05D008013 5.3e-96 355.1 244 70.1
AUR62028646 Chenopodium quinoa HOM05D006330 ORTHO05D008013 1.1e-93 347.4 218 78.9
Dinv28793 Davidia involucrata HOM05D006330 ORTHO05D008013 5.7e-90 335.1 260 71.2
Nitab4.5_0010469g0010 Nicotiana tabacum HOM05D006330 ORTHO05D008013 4.8e-89 332.0 258 70.9
Lj3g0006219 Lotus japonicus HOM05D006330 ORTHO05D008013 6.3e-89 331.6 242 73.6
Peaxi162Scf00841g00112 Petunia axillaris HOM05D006330 ORTHO05D008013 6.3e-89 331.6 318 60.7
CBR_g60689 Chara braunii HOM05D006330 ORTHO05D008013 8.2e-89 331.3 246 68.3
BcaC01g03225 Brassica carinata HOM05D006330 ORTHO05D008013 1.1e-88 330.9 250 70.0
Nitab4.5_0000038g0340 Nicotiana tabacum HOM05D006330 ORTHO05D008013 4.1e-88 328.9 254 71.7
Solyc09g047870.4 Solanum lycopersicum HOM05D006330 ORTHO05D008013 7.7e-87 324.7 215 80.0
CSS0004044 Camellia sinensis var. sinensis HOM05D006330 ORTHO05D008013 1.0e-86 324.3 239 70.7
Oeu049580.1 Olea europaea HOM05D006330 ORTHO05D008013 2.2e-86 323.2 220 77.3
SMO141G0006 Selaginella moellendorffii HOM05D006330 ORTHO05D008013 2.1e-84 316.6 254 62.6
SMO186G0001 Selaginella moellendorffii HOM05D006330 ORTHO05D008013 1.3e-81 307.4 245 62.0
Cpa.g.sc8.41 Carica papaya HOM05D006330 ORTHO05D008013 1.1e-80 304.3 221 71.9
BcaB06g26747 Brassica carinata HOM05D006330 ORTHO05D008013 1.2e-79 300.8 245 65.3
PSO732G0743 Papaver somniferum HOM05D006330 ORTHO05D008013 1.7e-78 297.0 178 83.1
MCO07G099 Micromonas commoda HOM05D006330 ORTHO05D008013 3.5e-71 272.7 246 57.7
HanXRQChr07g0198371 Helianthus annuus HOM05D006330 ORTHO05D008013 1.2e-68 264.2 226 62.8
FAN27G2337 Fragaria x ananassa HOM05D006330 ORTHO05D008013 1.8e-67 260.4 257 58.4
Cre10.g428900 Chlamydomonas reinhardtii HOM05D006330 ORTHO05D008013 1.6e-63 247.3 244 57.8
CAN.G253.5 Capsicum annuum HOM05D006330 ORTHO05D008013 1.3e-54 217.6 130 85.4
PRCOL_00000451 Prasinoderma coloniale HOM05D006330 ORTHO05D008013 6.8e-51 205.3 291 43.6
SEGI_37995 Sequoiadendron giganteum HOM05D006330 ORTHO05D008013 1.6e-44 184.1 117 74.4
AagrBONN_evm.TU.Sc2ySwM_368.2380 Anthoceros agrestis HOM05D006330 ORTHO05D008013 1.9e-40 170.6 115 71.3
arahy.Tifrunner.gnm1.ann1.VBTZ6V Arachis hypogaea HOM05D006330 ORTHO05D008013 2.8e-36 156.8 112 68.8
CDE04G0367 Ceratophyllum demersum HOM05D006330 ORTHO05D008013 1.4e-35 154.5 91 83.5
PSO675G8411 Papaver somniferum HOM05D006330 ORTHO05D008013 4.4e-34 149.4 95 74.7
Hma1.2p1_0161F.1_g071660 Hydrangea macrophylla HOM05D006330 ORTHO05D008013 3.5e-31 139.8 82 80.5
Cfa009322 Carpinus fangiana HOM05D006614 ORTHO05D008217 8.1e-28 128.6 78 79.5
BcaB06g26875 Brassica carinata HOM05D006330 ORTHO05D008013 3.1e-11 73.6 64 60.9
VMungo1383G2211 Vigna mungo HOM05D006330 ORTHO05D434633 4.9e-09 66.2 44 70.5
RcHm_v2.0_Chr5g0065021 Rosa chinensis HOM05D006330 ORTHO05D008013 1.1e-08 65.1 45 71.1


User provided reference genes

Program Settings