Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE02G1046 Ceratophyllum demersum HOM05D004257 ORTHO05D005202 7.7e-172 607.1 308 100.0
CDE04G1210 Ceratophyllum demersum HOM05D004257 ORTHO05D005202 4.4e-135 485.0 298 84.6
TAR365G0817 Trochodendron aralioides HOM05D004257 ORTHO05D005202 2.9e-134 482.3 343 73.8
Aqoxy2G03662 Aquilegia oxysepala HOM05D004257 ORTHO05D005202 1.2e-132 476.9 341 73.3
Hma1.2p1_0075F.1_g039210 Hydrangea macrophylla HOM05D004257 ORTHO05D005202 3.5e-132 475.3 341 72.4
CSS0006901 Camellia sinensis var. sinensis HOM05D004257 ORTHO05D005202 1.0e-131 473.8 342 71.3
CSS0016221 Camellia sinensis var. sinensis HOM05D004257 ORTHO05D005202 1.0e-131 473.8 342 71.3
TAR362G0002 Trochodendron aralioides HOM05D004257 ORTHO05D005202 1.0e-131 473.8 345 72.8
Aqoxy5G00217 Aquilegia oxysepala HOM05D004257 ORTHO05D005202 1.3e-131 473.4 340 73.2
Nn3g19680 Nelumbo nucifera HOM05D004257 ORTHO05D005202 3.0e-131 472.2 343 72.6
Dinv06012 Davidia involucrata HOM05D004257 ORTHO05D005202 5.0e-131 471.5 341 72.1
DCAR_010071 Daucus carota HOM05D004257 ORTHO05D005202 1.5e-130 469.9 340 71.5
Migut.O00233 Erythranthe guttata HOM05D004257 ORTHO05D005202 2.5e-130 469.2 347 71.5
SGA_v2.0_scaffold90G27780 Striga asiatica HOM05D004257 ORTHO05D005202 9.5e-130 467.2 345 69.9
Peaxi162Scf00171g00722 Petunia axillaris HOM05D004257 ORTHO05D005202 1.2e-129 466.8 340 70.6
PGSC0003DMG402031052 Solanum tuberosum HOM05D004257 ORTHO05D005202 2.1e-129 466.1 343 69.7
MSTRG.23192 Avicennia marina HOM05D004257 ORTHO05D005202 2.8e-129 465.7 345 70.7
Cc04_g09710 Coffea canephora HOM05D004257 ORTHO05D005202 3.6e-129 465.3 347 70.3
Hund06906 Selenicereus undatus HOM05D004257 ORTHO05D005202 8.1e-129 464.2 342 70.5
CAN.G637.23 Capsicum annuum HOM05D004257 ORTHO05D005202 1.1e-128 463.8 341 70.1
Nitab4.5_0004454g0010 Nicotiana tabacum HOM05D004257 ORTHO05D005202 1.1e-128 463.8 344 70.1
DCAR_014267 Daucus carota HOM05D004257 ORTHO05D005202 2.3e-128 462.6 341 70.4
PSO210G0560 Papaver somniferum HOM05D004257 ORTHO05D005202 4.0e-128 461.8 325 72.9
Actinidia38939 Actinidia chinensis HOM05D004257 ORTHO05D005202 5.2e-128 461.5 341 70.1
Potri.005G225700 Populus trichocarpa HOM05D004257 ORTHO05D005202 5.2e-128 461.5 342 70.5
PSO832G0932 Papaver somniferum HOM05D004257 ORTHO05D005202 8.9e-128 460.7 325 72.9
Manes.12G033300 Manihot esculenta HOM05D004257 ORTHO05D005202 4.4e-127 458.4 324 72.2
Potri.002G037400 Populus trichocarpa HOM05D004257 ORTHO05D005202 7.5e-127 457.6 342 69.6
PSO675G6112 Papaver somniferum HOM05D004257 ORTHO05D005202 9.9e-127 457.2 325 71.7
PSO675G8755 Papaver somniferum HOM05D004257 ORTHO05D005202 9.9e-127 457.2 325 71.7
Solyc03g098140.3 Solanum lycopersicum HOM05D004257 ORTHO05D005202 1.3e-126 456.8 344 68.3
Ah.04g163130 Amaranthus hybridus HOM05D004257 ORTHO05D005202 1.7e-126 456.4 324 72.2
Sopen03g028840 Solanum pennellii HOM05D004257 ORTHO05D005202 2.2e-126 456.1 344 68.3
Lj5A229T68 Lonicera japonica HOM05D004257 ORTHO05D005202 2.9e-126 455.7 342 70.2
Sabra02G0030200 Salix brachista HOM05D004257 ORTHO05D005202 4.9e-126 454.9 342 69.3
FvH4_2g21300 Fragaria vesca HOM05D004257 ORTHO05D005202 8.3e-126 454.1 346 68.2
CsaV3_3G022160 Cucumis sativus L. HOM05D004257 ORTHO05D005202 1.4e-125 453.4 349 68.5
AUR62004833 Chenopodium quinoa HOM05D004257 ORTHO05D005202 4.1e-125 451.8 340 69.7
PSO675G8702 Papaver somniferum HOM05D004257 ORTHO05D005202 5.4e-125 451.4 325 71.1
TWI18G0956 Tripterygium wilfordii HOM05D004257 ORTHO05D005202 5.4e-125 451.4 342 67.8
MELO3C012874.2 Cucumis melo HOM05D004257 ORTHO05D005202 7.1e-125 451.1 329 71.1
AUR62040921 Chenopodium quinoa HOM05D004257 ORTHO05D005202 9.2e-125 450.7 339 69.6
FAN20G1479 Fragaria x ananassa HOM05D004257 ORTHO05D005202 9.2e-125 450.7 346 67.6
FAN24G1061 Fragaria x ananassa HOM05D004257 ORTHO05D005202 1.2e-124 450.3 345 68.4
MSTRG.11529 Avicennia marina HOM05D004257 ORTHO05D005202 1.6e-124 449.9 338 69.5
Ciclev10021043m.g Citrus clementina HOM05D004257 ORTHO05D005202 1.6e-124 449.9 340 69.1
FAN27G2888 Fragaria x ananassa HOM05D004257 ORTHO05D005202 1.6e-124 449.9 346 67.6
Thecc.01G256600 Theobroma cacao HOM05D004257 ORTHO05D005202 2.7e-124 449.1 345 68.1
COL.COLO4_04031 Corchorus olitorius HOM05D004257 ORTHO05D005202 4.6e-124 448.4 345 67.2
CANSAT35G1745 Cannabis sativa HOM05D004257 ORTHO05D005202 6.0e-124 448.0 329 69.6
ClCG07G001120 Citrullus lanatus HOM05D004257 ORTHO05D005202 6.0e-124 448.0 355 66.5
MBI07_g16916_MAGBIO Magnolia biondii HOM05D004257 ORTHO05D005202 6.0e-124 448.0 319 71.8
Sed0014699 Sechium edule HOM05D004257 ORTHO05D005202 7.8e-124 447.6 353 66.9
Sc09g0004250 Simmondsia chinensis HOM05D004257 ORTHO05D005202 1.0e-123 447.2 325 70.2
Nitab4.5_0000936g0060 Nicotiana tabacum HOM05D004257 ORTHO05D005202 2.3e-123 446.0 330 69.7
QL09p039362 Quercus lobata HOM05D004257 ORTHO05D005202 5.1e-123 444.9 339 67.8
Duzib138G0002 Durio zibethinus HOM05D004257 ORTHO05D005202 6.6e-123 444.5 345 67.0
FAN15G2746 Fragaria x ananassa HOM05D004257 ORTHO05D005202 6.6e-123 444.5 349 67.0
RcHm_v2.0_Chr6g0287891 Rosa chinensis HOM05D004257 ORTHO05D005202 1.5e-122 443.4 338 67.8
Atru.chr5.1712 Acer truncatum HOM05D004257 ORTHO05D005202 1.9e-122 443.0 340 68.2
Cfa002439 Carpinus fangiana HOM05D004257 ORTHO05D005202 3.3e-122 442.2 338 68.3
Duzib133G1463 Durio zibethinus HOM05D004257 ORTHO05D005202 3.3e-122 442.2 345 66.7
Eucgr.K03257 Eucalyptus grandis HOM05D004257 ORTHO05D005202 4.3e-122 441.8 350 67.7
Prupe.8G222200 Prunus persica HOM05D004257 ORTHO05D005202 4.3e-122 441.8 326 70.2
vmacro10363 Vaccinium macrocarpon HOM05D004257 ORTHO05D005202 4.3e-122 441.8 344 68.3
CANSAT01G0143 Cannabis sativa HOM05D004257 ORTHO05D005202 2.8e-121 439.1 325 68.9
CiPaw.04G187400 Carya illinoinensis HOM05D004257 ORTHO05D005202 4.7e-121 438.3 342 67.0
Gorai.001G178500 Gossypium raimondii HOM05D004257 ORTHO05D005202 8.1e-121 437.6 345 66.1
Sed0007154 Sechium edule HOM05D004257 ORTHO05D005202 1.1e-120 437.2 344 66.9
Gohir.A07G149400 Gossypium hirsutum HOM05D004257 ORTHO05D005202 1.8e-120 436.4 345 66.1
Gohir.D07G155600 Gossypium hirsutum HOM05D004257 ORTHO05D005202 2.4e-120 436.0 345 65.8
CiPaw.03G265600 Carya illinoinensis HOM05D004257 ORTHO05D005202 1.2e-119 433.7 346 66.8
PGR044G0150 Punica granatum HOM05D004257 ORTHO05D005202 2.0e-119 433.0 326 69.3
TWI12G0832 Tripterygium wilfordii HOM05D004257 ORTHO05D005202 2.0e-119 433.0 342 65.5
Gohir.A11G131450 Gossypium hirsutum HOM05D004257 ORTHO05D005202 2.6e-119 432.6 347 65.1
Gorai.007G147100 Gossypium raimondii HOM05D004257 ORTHO05D005202 2.6e-119 432.6 347 65.4
THA.LOC104825258 Tarenaya hassleriana HOM05D004257 ORTHO05D005202 5.8e-119 431.4 343 65.0
ATR0736G010 Amborella trichopoda HOM05D004257 ORTHO05D005202 7.6e-119 431.0 340 67.4
Gohir.D11G137300 Gossypium hirsutum HOM05D004257 ORTHO05D005202 7.6e-119 431.0 347 65.1
BcaC02g09050 Brassica carinata HOM05D004257 ORTHO05D005202 2.9e-118 429.1 341 65.7
C04p37820 Brassica napus HOM05D004257 ORTHO05D005202 2.9e-118 429.1 341 65.7
BolC4t25358H Brassica oleracea HOM05D004257 ORTHO05D005202 2.9e-118 429.1 341 65.7
MD05G1195500 Malus domestica HOM05D004257 ORTHO05D005202 6.4e-118 427.9 326 68.7
arahy.Tifrunner.gnm1.ann1.63G7RJ Arachis hypogaea HOM05D004257 ORTHO05D005202 8.4e-118 427.6 318 69.8
HanXRQChr17g0542071 Helianthus annuus HOM05D004257 ORTHO05D005202 8.4e-118 427.6 346 67.1
MD10G1182800 Malus domestica HOM05D004257 ORTHO05D005202 1.1e-117 427.2 321 69.8
Glyma.19G165400 Glycine max HOM05D004257 ORTHO05D005202 1.4e-117 426.8 343 65.9
Psat3g056800 Pisum sativum HOM05D004257 ORTHO05D005202 1.4e-117 426.8 323 68.1
BcaC08g44693 Brassica carinata HOM05D004257 ORTHO05D005202 2.4e-117 426.0 348 64.1
C06p22290 Brassica napus HOM05D004257 ORTHO05D005202 2.4e-117 426.0 348 64.1
Haze_24645 Corylus avellana HOM05D004257 ORTHO05D005202 4.1e-117 425.2 369 62.6
VMungo1383G3387 Vigna mungo HOM05D004257 ORTHO05D005202 4.1e-117 425.2 325 67.7
CSS0001153 Camellia sinensis var. sinensis HOM05D004257 ORTHO05D005202 5.4e-117 424.9 344 66.6
Aa31sc35G30 Aethionema arabicum HOM05D004257 ORTHO05D005202 7.1e-117 424.5 346 64.7
BolC6t37415H Brassica oleracea HOM05D004257 ORTHO05D005202 7.1e-117 424.5 348 64.1
Lsat_1_v5_gn_3_39581 Lactuca sativa HOM05D004257 ORTHO05D005202 7.1e-117 424.5 341 66.3
A04p05160 Brassica napus HOM05D004257 ORTHO05D005202 1.6e-116 423.3 341 65.4
BraA04t16226Z Brassica rapa HOM05D004257 ORTHO05D005202 1.6e-116 423.3 341 65.4
Medtr7g097060 Medicago truncatula HOM05D004257 ORTHO05D005202 4.6e-116 421.8 323 66.9
Lalb_Chr01g0019631 Lupinus albus HOM05D004257 ORTHO05D005202 6.0e-116 421.4 344 64.5
AT3G54690 Arabidopsis thaliana HOM05D004257 ORTHO05D005202 7.8e-116 421.0 324 67.3
Ca_08681_v3 Cicer arietinum L. HOM05D004257 ORTHO05D005202 7.8e-116 421.0 323 66.9
Cpa.g.sc473.3 Carica papaya HOM05D004257 ORTHO05D005202 1.3e-115 420.2 337 64.7
Phvul.001G161500 Phaseolus vulgaris HOM05D004257 ORTHO05D005202 1.3e-115 420.2 325 66.8
Carub.0005s2129 Capsella rubella HOM05D004257 ORTHO05D005202 1.7e-115 419.9 355 63.4
BcaB02g07726 Brassica carinata HOM05D004257 ORTHO05D005202 3.0e-115 419.1 349 63.0
Thhalv10010498m.g Eutrema salsugineum HOM05D004257 ORTHO05D005202 3.0e-115 419.1 353 62.6
AL5G35770 Arabidopsis lyrata HOM05D004257 ORTHO05D005202 5.1e-115 418.3 324 67.0
Lj1g0005279 Lotus japonicus HOM05D004257 ORTHO05D005202 1.5e-114 416.8 343 64.1
arahy.Tifrunner.gnm1.ann1.BG7UA0 Arachis hypogaea HOM05D004257 ORTHO05D005202 4.3e-114 415.2 339 65.5
CSS0045427 Camellia sinensis var. sinensis HOM05D004257 ORTHO05D005202 4.3e-114 415.2 325 68.6
Sp5g07760 Schrenkiella parvula HOM05D004257 ORTHO05D005202 5.6e-114 414.8 355 62.5
CARHR164610 Cardamine hirsuta HOM05D004257 ORTHO05D005202 9.6e-114 414.1 324 66.0
CSS0049630 Camellia sinensis var. sinensis HOM05D004257 ORTHO05D005202 4.9e-110 401.7 344 64.0
GSVIVG01028350001 Vitis vinifera HOM05D004257 ORTHO05D005202 1.0e-107 394.0 310 68.1
TPR.G7131 Trifolium pratense HOM05D004257 ORTHO05D005202 3.3e-106 389.0 384 56.5
Zm00001eb207770 Zea mays HOM05D004257 ORTHO05D005202 9.6e-106 387.5 329 62.3
HPP92_017366 Vanilla planifolia HOM05D004257 ORTHO05D005202 1.6e-105 386.7 344 61.0
Zm00001eb232580 Zea mays HOM05D004257 ORTHO05D005202 2.8e-105 386.0 329 62.3
BraA07t29902Z Brassica rapa HOM05D004257 ORTHO05D005202 4.8e-105 385.2 348 60.1
unitig_0.g1405 Utricularia gibba HOM05D004257 ORTHO05D005202 3.1e-104 382.5 323 65.3
Oeu023635.1 Olea europaea HOM05D004257 ORTHO05D005202 4.0e-104 382.1 314 65.0
Os02g0158300 Oryza sativa ssp. japonica HOM05D004257 ORTHO05D005202 4.0e-104 382.1 327 61.8
HPP92_010358 Vanilla planifolia HOM05D004257 ORTHO05D005202 2.6e-103 379.4 324 61.7
BcaC05g28242 Brassica carinata HOM05D004257 ORTHO05D005202 1.7e-102 376.7 347 59.4
BolC5t33007H Brassica oleracea HOM05D004257 ORTHO05D005202 1.7e-102 376.7 347 59.4
SalBow5G3197 Salvia bowleyana HOM05D004257 ORTHO05D005202 4.9e-102 375.2 292 66.8
SalBow5G4297 Salvia bowleyana HOM05D004257 ORTHO05D005202 4.9e-102 375.2 292 66.8
AagrBONN_evm.TU.Sc2ySwM_344.1200 Anthoceros agrestis HOM05D004257 ORTHO05D005202 6.4e-102 374.8 325 60.3
unitig_61.g26464 Utricularia gibba HOM05D004257 ORTHO05D005202 3.2e-101 372.5 314 64.6
AagrBONN_evm.TU.Sc2ySwM_344.3818 Anthoceros agrestis HOM05D004257 ORTHO05D005202 5.4e-101 371.7 320 60.6
SMO367G0216 Selaginella moellendorffii HOM05D004257 ORTHO05D005202 4.6e-100 368.6 326 59.2
Mapoly0023s0132 Marchantia polymorpha HOM05D004257 ORTHO05D005202 7.9e-100 367.9 319 58.3
Pp3c23_13620 Physcomitrium patens HOM05D004257 ORTHO05D005202 6.0e-92 341.7 318 56.6
EL10Ac4g09002 Beta vulgaris HOM05D004257 ORTHO05D005202 1.0e-91 340.9 271 66.4
CBR_g20340 Chara braunii HOM05D004257 ORTHO05D005202 8.2e-89 331.3 343 50.4
Pp3c5_14840 Physcomitrium patens HOM05D004257 ORTHO05D005202 1.1e-88 330.9 318 56.3
ECA246G4101 Erigeron canadensis HOM05D004257 ORTHO05D005202 1.6e-81 307.0 230 70.4
BcaB02g08451 Brassica carinata HOM05D004257 ORTHO05D005202 1.7e-78 297.0 195 77.4
CDE02G2420 Ceratophyllum demersum HOM05D004257 ORTHO05D005202 1.4e-77 293.9 228 68.4
C05p42800 Brassica napus HOM05D004257 ORTHO05D005202 3.7e-73 279.3 255 58.0
SGA_v2.0_scaffold25G10776 Striga asiatica HOM05D004257 ORTHO05D005202 2.7e-68 263.1 185 73.0
Pp3c24_11040 Physcomitrium patens HOM05D004257 ORTHO05D005202 3.7e-65 252.7 298 49.3
PSO470G0001 Papaver somniferum HOM05D004257 ORTHO05D005202 8.0e-60 235.0 192 64.1
AagrBONN_evm.TU.Sc2ySwM_228.5393 Anthoceros agrestis HOM05D004257 ORTHO05D005202 1.8e-56 223.8 165 66.1
A07p22230 Brassica napus HOM05D004257 ORTHO05D005202 5.5e-53 212.2 131 80.9
Actinidia34751 Actinidia chinensis HOM05D000378 ORTHO05D005202 7.2e-53 211.8 137 76.6
Oeu036414.1 Olea europaea HOM05D004257 ORTHO05D005202 2.3e-51 206.8 123 80.5
CAN.G65.83 Capsicum annuum HOM05D004257 ORTHO05D005202 7.5e-50 201.8 205 55.1
SEGI_04972 Sequoiadendron giganteum HOM05D004257 ORTHO05D005202 1.7e-49 200.7 122 77.9
SEGI_22917 Sequoiadendron giganteum HOM05D004257 ORTHO05D005202 5.0e-46 189.1 186 53.8
SEGI_29481 Sequoiadendron giganteum HOM05D004257 ORTHO05D005202 5.0e-46 189.1 186 53.8
BcaC07g39794 Brassica carinata HOM05D004257 ORTHO05D005202 2.3e-43 180.3 164 61.6
BolC8t50595H Brassica oleracea HOM05D004257 ORTHO05D005202 1.1e-40 171.4 164 58.5
C08p29840 Brassica napus HOM05D004257 ORTHO05D005202 1.3e-38 164.5 164 56.7
AagrBONN_evm.TU.Sc2ySwM_228.5394 Anthoceros agrestis HOM05D004257 ORTHO05D005202 8.6e-30 135.2 104 62.5
Peaxi162Scf00643g00656 Petunia axillaris HOM05D004257 ORTHO05D005202 1.1e-29 134.8 119 64.7
Lsat_1_v5_gn_8_28701 Lactuca sativa HOM05D004257 ORTHO05D005202 1.5e-26 124.4 92 70.7
EL10Ac4g09003 Beta vulgaris HOM05D004257 ORTHO05D005202 2.7e-23 113.6 70 77.1
Lj6g0021985 Lotus japonicus HOM05D004257 ORTHO05D236371 1.5e-18 97.8 72 65.3
BcaB01g01067 Brassica carinata HOM05D004257 ORTHO05D092693 3.9e-14 83.2 78 56.4
Aqoxy1G04111 Aquilegia oxysepala HOM05D004257 ORTHO05D004515 6.6e-14 82.4 175 34.3
CDE04G3164 Ceratophyllum demersum HOM05D004257 ORTHO05D130150 2.4e-08 63.9 36 80.6
Pp3c2_23370 Physcomitrium patens HOM05D004257 ORTHO05D005202 2.7e-07 60.5 76 42.1
Lsat_1_v5_gn_6_26721 Lactuca sativa HOM05D004257 ORTHO05D230427 1.0e-06 58.5 42 71.4


User provided reference genes

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