Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE02G0891 Ceratophyllum demersum HOM05D004162 ORTHO05D004543 5.4e-164 580.9 281 100.0
CDE11G0199 Ceratophyllum demersum HOM05D004162 ORTHO05D004543 2.0e-78 296.6 195 75.9
MBI08_g04930_MAGBIO Magnolia biondii HOM05D004162 ORTHO05D004543 5.0e-61 238.8 196 60.7
TAR636G2328 Trochodendron aralioides HOM05D004162 ORTHO05D004543 1.5e-57 227.3 193 56.5
Migut.D01539 Erythranthe guttata HOM05D004162 ORTHO05D004543 1.1e-55 221.1 196 54.6
GSVIVG01008445001 Vitis vinifera HOM05D004162 ORTHO05D004543 3.2e-55 219.5 196 55.6
SalBow3G1690 Salvia bowleyana HOM05D004162 ORTHO05D004543 2.0e-54 216.9 196 53.1
SalBow3G1953 Salvia bowleyana HOM05D004162 ORTHO05D004543 2.0e-54 216.9 196 53.1
Hma1.2p1_3150F.1_g333200 Hydrangea macrophylla HOM05D004162 ORTHO05D004543 3.5e-54 216.1 196 56.1
Cc04_g06230 Coffea canephora HOM05D004162 ORTHO05D004543 6.0e-54 215.3 192 53.6
Rhsim08G0126500 Rhododendron simsii HOM05D004162 ORTHO05D004543 1.0e-53 214.5 192 56.8
TAR371G1103 Trochodendron aralioides HOM05D004162 ORTHO05D004543 1.0e-53 214.5 196 54.6
SGA_v2.0_scaffold172G39016 Striga asiatica HOM05D004162 ORTHO05D004543 1.5e-52 210.7 196 52.6
QL10p029785 Quercus lobata HOM05D004162 ORTHO05D004543 1.9e-52 210.3 196 51.0
CSS0046385 Camellia sinensis var. sinensis HOM05D004162 ORTHO05D004543 7.3e-52 208.4 194 53.1
MSTRG.9305 Avicennia marina HOM05D004162 ORTHO05D004543 1.2e-51 207.6 196 52.0
Ciclev10008209m.g Citrus clementina HOM05D004162 ORTHO05D004543 1.2e-51 207.6 196 52.6
Dinv08781 Davidia involucrata HOM05D004162 ORTHO05D004543 2.8e-51 206.5 193 53.9
MBI07_g11051_MAGBIO Magnolia biondii HOM05D004162 ORTHO05D004543 3.6e-51 206.1 192 56.2
Aqoxy6G00116 Aquilegia oxysepala HOM05D004162 ORTHO05D004543 2.3e-50 203.4 192 51.0
CAN.G660.38 Capsicum annuum HOM05D004162 ORTHO05D004543 6.8e-50 201.8 193 50.8
ECA238G4801 Erigeron canadensis HOM05D004162 ORTHO05D004543 6.8e-50 201.8 193 52.8
Nn4g24245 Nelumbo nucifera HOM05D004162 ORTHO05D004543 8.9e-50 201.4 193 52.3
Aqoxy7G03636 Aquilegia oxysepala HOM05D000527 ORTHO05D004543 1.2e-49 201.1 205 49.3
Manes.06G005900 Manihot esculenta HOM05D004162 ORTHO05D004543 1.5e-49 200.7 193 49.7
PSO210G3845 Papaver somniferum HOM05D004162 ORTHO05D004543 2.0e-49 200.3 193 52.3
CiPaw.15G143600 Carya illinoinensis HOM05D004162 ORTHO05D004543 5.8e-49 198.7 193 50.8
Lj5C158G4 Lonicera japonica HOM05D004162 ORTHO05D004543 5.8e-49 198.7 193 51.8
Oeu046631.1 Olea europaea HOM05D004162 ORTHO05D004543 2.2e-48 196.8 196 50.5
Ah.04g164220 Amaranthus hybridus HOM05D004162 ORTHO05D004543 3.7e-48 196.1 201 47.8
Lsat_1_v5_gn_2_63961 Lactuca sativa HOM05D004162 ORTHO05D004543 3.7e-48 196.1 193 50.3
EL10Ac4g08358 Beta vulgaris HOM05D004162 ORTHO05D004543 4.9e-48 195.7 201 44.8
Cfa019653 Carpinus fangiana HOM05D004162 ORTHO05D004543 8.3e-48 194.9 196 50.5
PSO832G0101 Papaver somniferum HOM05D004162 ORTHO05D004543 5.4e-47 192.2 193 50.8
COL.COLO4_05717 Corchorus olitorius HOM05D004162 ORTHO05D004543 7.0e-47 191.8 192 48.4
PGSC0003DMG400021171 Solanum tuberosum HOM05D004162 ORTHO05D004543 9.2e-47 191.4 203 47.8
Duzib205G1017 Durio zibethinus HOM05D004162 ORTHO05D004543 1.2e-46 191.0 197 46.2
Peaxi162Scf00050g02313 Petunia axillaris HOM05D004162 ORTHO05D004543 1.6e-46 190.7 193 48.7
Thecc.03G055600 Theobroma cacao HOM05D004162 ORTHO05D004543 1.6e-46 190.7 196 46.9
DCAR_003065 Daucus carota HOM05D004162 ORTHO05D004543 2.7e-46 189.9 192 51.6
Solyc02g070300.4 Solanum lycopersicum HOM05D004162 ORTHO05D004543 2.7e-46 189.9 203 47.3
Sopen02g019390 Solanum pennellii HOM05D004162 ORTHO05D004543 2.7e-46 189.9 203 47.3
Haze_18859 Corylus avellana HOM05D004162 ORTHO05D004543 3.5e-46 189.5 196 50.0
Gohir.A12G191000 Gossypium hirsutum HOM05D004162 ORTHO05D004543 1.7e-45 187.2 196 48.0
Gohir.D12G193100 Gossypium hirsutum HOM05D004162 ORTHO05D004543 2.3e-45 186.8 196 48.0
Gorai.008G207900 Gossypium raimondii HOM05D004162 ORTHO05D004543 2.3e-45 186.8 196 48.0
Nn3g21925 Nelumbo nucifera HOM05D004162 ORTHO05D004543 1.5e-44 184.1 198 49.5
TWI81G0681 Tripterygium wilfordii HOM05D004162 ORTHO05D004543 1.9e-44 183.7 196 45.4
HanXRQChr14g0447361 Helianthus annuus HOM05D004162 ORTHO05D004543 2.5e-44 183.3 193 48.2
Lalb_Chr05g0221631 Lupinus albus HOM05D004162 ORTHO05D004543 5.6e-44 182.2 202 49.0
Prupe.5G233900 Prunus persica HOM05D004162 ORTHO05D004543 5.6e-44 182.2 202 47.0
Nitab4.5_0001756g0030 Nicotiana tabacum HOM05D004162 ORTHO05D004543 2.1e-43 180.3 193 46.6
Atru.chr9.1725 Acer truncatum HOM05D004162 ORTHO05D004543 1.4e-42 177.6 195 46.7
Eucgr.B00998 Eucalyptus grandis HOM05D004162 ORTHO05D004543 1.4e-42 177.6 193 46.6
Nitab4.5_0005963g0070 Nicotiana tabacum HOM05D004162 ORTHO05D004543 1.4e-42 177.6 197 46.7
Psat4g000200 Pisum sativum HOM05D004162 ORTHO05D004543 8.9e-42 174.9 209 45.0
Atru.chr9.1709 Acer truncatum HOM05D004162 ORTHO05D004543 1.2e-41 174.5 195 46.2
ClCG04G010610 Citrullus lanatus HOM05D004162 ORTHO05D004543 1.5e-41 174.1 174 50.0
Gohir.D07G078300 Gossypium hirsutum HOM05D004162 ORTHO05D004543 5.8e-41 172.2 196 45.4
Phvul.002G330500 Phaseolus vulgaris HOM05D004162 ORTHO05D004543 5.8e-41 172.2 203 46.8
PGR083G0911 Punica granatum HOM05D004162 ORTHO05D004543 5.8e-41 172.2 209 44.5
CANSAT54G2092 Cannabis sativa HOM05D004162 ORTHO05D004543 3.7e-40 169.5 196 46.9
Haze_09240 Corylus avellana HOM05D004162 ORTHO05D004543 4.9e-40 169.1 198 43.4
Gorai.001G082700 Gossypium raimondii HOM05D004162 ORTHO05D004543 1.1e-39 167.9 196 44.9
SHI19078 Sapria himalayana HOM05D004162 ORTHO05D004543 1.4e-39 167.5 189 46.0
Sed0019203 Sechium edule HOM05D004162 ORTHO05D004543 1.4e-39 167.5 190 45.8
HPP92_005364 Vanilla planifolia HOM05D004162 ORTHO05D004543 1.4e-39 167.5 190 46.3
CsaV3_1G007180 Cucumis sativus L. HOM05D004162 ORTHO05D004543 1.9e-39 167.2 174 49.4
MELO3C002134.2 Cucumis melo HOM05D004162 ORTHO05D004543 3.2e-39 166.4 174 50.0
Cfa011869 Carpinus fangiana HOM05D004162 ORTHO05D004543 4.1e-39 166.0 199 43.7
AUR62037555 Chenopodium quinoa HOM05D004162 ORTHO05D004543 4.1e-39 166.0 251 36.7
CANSAT80G1525 Cannabis sativa HOM05D004162 ORTHO05D004543 4.6e-38 162.5 196 45.4
unitig_22.g6151 Utricularia gibba HOM05D004162 ORTHO05D004543 1.0e-37 161.4 197 43.1
Oeu011444.1 Olea europaea HOM05D004162 ORTHO05D004543 1.9e-36 157.1 190 45.3
Hma1.2p1_0013F.1_g007880 Hydrangea macrophylla HOM05D004162 ORTHO05D004543 9.5e-36 154.8 196 46.9
Medtr8g107380 Medicago truncatula HOM05D004162 ORTHO05D004543 9.5e-36 154.8 186 44.1
VMungo0251G2472 Vigna mungo HOM05D004162 ORTHO05D004543 1.6e-35 154.1 203 43.8
MD06G1227400 Malus domestica HOM05D004162 ORTHO05D004543 2.8e-35 153.3 200 40.0
Ca_17185_v3 Cicer arietinum L. HOM05D004162 ORTHO05D004543 1.4e-34 151.0 204 41.7
ATR0594G087 Amborella trichopoda HOM05D004162 ORTHO05D004543 2.4e-34 150.2 191 43.5
RcHm_v2.0_Chr7g0178331 Rosa chinensis HOM05D004162 ORTHO05D004543 8.9e-34 148.3 197 40.6
Ciclev10005180m.g Citrus clementina HOM05D004162 ORTHO05D004543 2.0e-33 147.1 205 37.6
Rhsim02G0000200 Rhododendron simsii HOM05D004162 ORTHO05D004543 3.4e-33 146.4 193 41.5
Nitab4.5_0000869g0150 Nicotiana tabacum HOM05D004162 ORTHO05D004543 4.4e-33 146.0 204 41.2
TWI75G0727 Tripterygium wilfordii HOM05D004162 ORTHO05D004543 4.4e-33 146.0 206 41.7
MD13G1006200 Malus domestica HOM05D004162 ORTHO05D004543 7.6e-33 145.2 208 39.4
vmacro09753 Vaccinium macrocarpon HOM05D004162 ORTHO05D004543 9.9e-33 144.8 206 40.8
PSO513G0134 Papaver somniferum HOM05D004162 ORTHO05D004543 3.8e-32 142.9 185 44.9
FvH4_6g53500 Fragaria vesca HOM05D004162 ORTHO05D004543 6.4e-32 142.1 197 40.6
FAN14G2905 Fragaria x ananassa HOM05D004162 ORTHO05D004543 6.4e-32 142.1 197 40.6
Glyma.05G246600 Glycine max HOM05D004162 ORTHO05D004543 8.4e-32 141.7 202 42.1
FAN05G0184 Fragaria x ananassa HOM05D004162 ORTHO05D004543 1.1e-31 141.4 197 40.6
FAN09G1804 Fragaria x ananassa HOM05D004162 ORTHO05D004543 2.4e-31 140.2 197 40.6
Peaxi162Scf00420g00077 Petunia axillaris HOM05D004162 ORTHO05D004543 3.2e-31 139.8 196 42.9
Glyma.08G054800 Glycine max HOM05D004162 ORTHO05D004543 4.1e-31 139.4 202 43.6
Mapoly0002s0230 Marchantia polymorpha HOM05D004162 ORTHO05D004543 5.4e-31 139.0 199 40.2
FAN02G1371 Fragaria x ananassa HOM05D004162 ORTHO05D004543 7.1e-31 138.7 198 39.4
PSO339G4834 Papaver somniferum HOM05D004162 ORTHO05D004543 9.2e-31 138.3 185 43.8
CARHR103050 Cardamine hirsuta HOM05D004162 ORTHO05D004543 2.7e-30 136.7 233 34.8
THA.LOC104812555 Tarenaya hassleriana HOM05D004162 ORTHO05D004543 3.5e-30 136.3 173 42.2
Thhalv10028628m.g Eutrema salsugineum HOM05D004162 ORTHO05D004543 4.6e-30 136.0 193 38.3
Cc07_g00810 Coffea canephora HOM05D004162 ORTHO05D004543 1.0e-29 134.8 196 42.3
Sp6g08970 Schrenkiella parvula HOM05D004162 ORTHO05D004543 3.0e-29 133.3 193 37.3
Zm00001eb433700 Zea mays HOM05D004162 ORTHO05D004543 4.3e-28 129.4 198 37.9
Actinidia07535 Actinidia chinensis HOM05D004162 ORTHO05D004543 9.6e-28 128.3 203 39.9
Aa31LG5G17260 Aethionema arabicum HOM05D004162 ORTHO05D004543 9.6e-28 128.3 171 39.2
FAN02G2531 Fragaria x ananassa HOM05D004162 ORTHO05D004543 6.2e-27 125.6 198 39.9
Pp3c18_21900 Physcomitrium patens HOM05D004162 ORTHO05D004543 6.2e-27 125.6 188 38.3
Atru.chr1.59 Acer truncatum HOM05D004162 ORTHO05D004543 2.4e-26 123.6 198 37.9
AT2G05210 Arabidopsis thaliana HOM05D004162 ORTHO05D004543 6.9e-26 122.1 173 36.4
CiPaw.09G010800 Carya illinoinensis HOM05D004162 ORTHO05D004543 9.0e-26 121.7 134 47.0
AL3G42790 Arabidopsis lyrata HOM05D004162 ORTHO05D004543 1.5e-25 120.9 173 36.4
AagrBONN_evm.TU.Sc2ySwM_228.478 Anthoceros agrestis HOM05D004162 ORTHO05D004543 7.6e-25 118.6 203 36.0
CANSAT78G2305 Cannabis sativa HOM05D004162 ORTHO05D004543 8.4e-24 115.2 191 36.1
TPR.G1445 Trifolium pratense HOM05D004162 ORTHO05D004543 3.2e-23 113.2 200 38.5
BcaC04g21892 Brassica carinata HOM05D004162 ORTHO05D004543 2.7e-22 110.2 195 33.3
C09p26100 Brassica napus HOM05D004162 ORTHO05D004543 2.7e-22 110.2 195 33.3
BolC9t55513H Brassica oleracea HOM05D004162 ORTHO05D004543 2.7e-22 110.2 195 33.3
THA.LOC104810218 Tarenaya hassleriana HOM05D004162 ORTHO05D004543 3.5e-22 109.8 205 33.7
THA.LOC104826807 Tarenaya hassleriana HOM05D004162 ORTHO05D004543 3.5e-22 109.8 205 33.7
A09p20680 Brassica napus HOM05D004162 ORTHO05D004543 6.0e-22 109.0 213 32.4
BraA09t37672Z Brassica rapa HOM05D004162 ORTHO05D004543 6.0e-22 109.0 213 32.4
Cfa023195 Carpinus fangiana HOM05D004162 ORTHO05D004543 6.0e-22 109.0 199 34.7
arahy.Tifrunner.gnm1.ann1.681ID1 Arachis hypogaea HOM05D004162 ORTHO05D004543 1.0e-21 108.2 232 34.5
BcaB07g30993 Brassica carinata HOM05D004162 ORTHO05D004543 1.7e-21 107.5 173 38.2
arahy.Tifrunner.gnm1.ann1.7MCX13 Arachis hypogaea HOM05D004162 ORTHO05D004543 2.3e-21 107.1 232 34.1
arahy.Tifrunner.gnm1.ann1.B7AHJA Arachis hypogaea HOM05D004162 ORTHO05D004543 5.1e-21 105.9 232 34.1
Carub.0006s0520 Capsella rubella HOM05D004162 ORTHO05D004543 1.5e-20 104.4 189 33.3
BolC9t59794H Brassica oleracea HOM05D004162 ORTHO05D004543 9.6e-20 101.7 195 32.8
Potri.012G046400 Populus trichocarpa HOM05D004162 ORTHO05D004543 1.6e-19 100.9 118 41.5
Sp6g36540 Schrenkiella parvula HOM05D004162 ORTHO05D004543 8.1e-19 98.6 183 32.2
AL6G16350 Arabidopsis lyrata HOM05D004162 ORTHO05D004543 1.1e-18 98.2 181 34.3
SMO358G0036 Selaginella moellendorffii HOM05D002930 ORTHO05D003283 1.4e-18 97.8 211 33.6
A10p30070 Brassica napus HOM05D004162 ORTHO05D004543 6.9e-18 95.5 184 33.2
Dinv27223 Davidia involucrata HOM05D004162 ORTHO05D004543 9.0e-18 95.1 116 44.8
Thhalv10013532m.g Eutrema salsugineum HOM05D004162 ORTHO05D004543 9.0e-18 95.1 183 33.3
Gohir.A07G073600 Gossypium hirsutum HOM05D004162 ORTHO05D004543 9.0e-18 95.1 135 36.3
BraA10t45047Z Brassica rapa HOM05D004162 ORTHO05D004543 1.2e-17 94.7 186 33.3
C09p70490 Brassica napus HOM05D004162 ORTHO05D004543 2.6e-17 93.6 184 32.6
BcaC06g32364 Brassica carinata HOM05D004162 ORTHO05D004543 3.4e-17 93.2 195 31.8
Sc04g0004810 Simmondsia chinensis HOM05D004162 ORTHO05D004543 4.5e-17 92.8 133 36.8
VMungo0251G0610 Vigna mungo HOM05D004162 ORTHO05D004543 5.8e-17 92.4 168 36.3
AT5G06310 Arabidopsis thaliana HOM05D004162 ORTHO05D004543 1.3e-16 91.3 184 31.5
CARHR207050 Cardamine hirsuta HOM05D004162 ORTHO05D004543 6.4e-16 89.0 185 32.4
AUR62019586 Chenopodium quinoa HOM05D004162 ORTHO05D004543 3.2e-15 86.7 68 60.3
AUR62013945 Chenopodium quinoa HOM05D004162 ORTHO05D004543 2.7e-14 83.6 68 58.8
Carub.0003s2670 Capsella rubella HOM05D004162 ORTHO05D004543 8.7e-13 78.6 133 34.6
Lj4g0021249 Lotus japonicus HOM05D002609 ORTHO05D002820 5.6e-12 75.9 99 38.4
CBR_g32246 Chara braunii HOM05D004162 ORTHO05D004543 1.1e-10 71.6 201 28.4
Haze_09935 Corylus avellana HOM05D001513 ORTHO05D004543 5.3e-10 69.3 58 55.2
unitig_90.g27442 Utricularia gibba HOM05D004162 ORTHO05D004543 1.5e-09 67.8 190 27.4
VMungo0464G1157 Vigna mungo HOM05D004162 ORTHO05D004543 1.7e-08 64.3 98 42.9
VMungo0464G1805 Vigna mungo HOM05D004162 ORTHO05D004543 6.4e-08 62.4 101 41.6
SEGI_28626 Sequoiadendron giganteum HOM05D004162 ORTHO05D004543 3.2e-07 60.1 81 44.4


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