Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE02G0724 Ceratophyllum demersum HOM05D004433 ORTHO05D005251 3.4e-59 231.5 119 100.0
CDE09G0966 Ceratophyllum demersum HOM05D004433 ORTHO05D005251 3.1e-52 208.4 118 89.0
MBI04_g07004_MAGBIO Magnolia biondii HOM05D004433 ORTHO05D005251 1.4e-15 86.7 118 46.6
Nn8g39044 Nelumbo nucifera HOM05D004433 ORTHO05D005251 6.3e-13 77.8 121 44.6
TAR639G0002 Trochodendron aralioides HOM05D004433 ORTHO05D005251 5.3e-12 74.7 121 44.6
Aqoxy5G01364 Aquilegia oxysepala HOM05D004433 ORTHO05D005251 1.4e-09 66.6 79 53.2
ECA233G5497 Erigeron canadensis HOM05D004433 ORTHO05D005251 3.2e-09 65.5 61 57.4
GSVIVG01035316001 Vitis vinifera HOM05D004433 ORTHO05D005251 5.5e-09 64.7 122 41.0
Actinidia14688 Actinidia chinensis HOM05D004433 ORTHO05D005251 7.2e-09 64.3 78 48.7
Ciclev10010169m.g Citrus clementina HOM05D004433 ORTHO05D005251 7.2e-09 64.3 123 39.8
ATR1159G027 Amborella trichopoda HOM05D004433 ORTHO05D005251 3.6e-08 62.0 54 59.3
Ciclev10007803m.g Citrus clementina HOM05D004433 ORTHO05D005251 3.6e-08 62.0 123 36.6
DCAR_003083 Daucus carota HOM05D004433 ORTHO05D005251 1.0e-07 60.5 120 36.7
Dinv27935 Davidia involucrata HOM05D004433 ORTHO05D005251 1.0e-07 60.5 82 51.2
PSO210G0672 Papaver somniferum HOM05D004433 ORTHO05D005251 3.0e-07 58.9 79 46.8
CAN.G1444.6 Capsicum annuum HOM05D004433 ORTHO05D005251 3.9e-07 58.5 53 58.5
HanXRQChr02g0047921 Helianthus annuus HOM05D004433 ORTHO05D005251 3.9e-07 58.5 55 58.2
Dinv23396 Davidia involucrata HOM05D004433 ORTHO05D005251 6.7e-07 57.8 52 57.7
Nitab4.5_0000318g0140 Nicotiana tabacum HOM05D004433 ORTHO05D005251 6.7e-07 57.8 88 45.5
CSS0005257 Camellia sinensis var. sinensis HOM05D004433 ORTHO05D005251 8.8e-07 57.4 110 42.7
CSS0005508 Camellia sinensis var. sinensis HOM05D004433 ORTHO05D005251 8.8e-07 57.4 110 42.7
Nitab4.5_0008242g0010 Nicotiana tabacum HOM05D004433 ORTHO05D005251 8.8e-07 57.4 88 45.5
PSO210G3373 Papaver somniferum HOM05D004433 ORTHO05D005251 8.8e-07 57.4 78 46.2
TWI34G1917 Tripterygium wilfordii HOM05D004433 ORTHO05D005251 8.8e-07 57.4 81 46.9
ATR0705G146 Amborella trichopoda HOM05D004433 ORTHO05D005251 1.1e-06 57.0 54 57.4
Duzib168G1809 Durio zibethinus HOM05D004433 ORTHO05D005251 1.5e-06 56.6 97 47.4
Atru.chr7.2050 Acer truncatum HOM05D004433 ORTHO05D005251 2.6e-06 55.8 132 37.9
Ca_03360_v3 Cicer arietinum L. HOM05D004433 ORTHO05D005251 2.6e-06 55.8 105 40.0
HPP92_003623 Vanilla planifolia HOM05D004433 ORTHO05D005251 2.6e-06 55.8 79 48.1
HPP92_005557 Vanilla planifolia HOM05D004433 ORTHO05D005251 3.3e-06 55.5 128 37.5
Oeu019243.1 Olea europaea HOM05D004433 ORTHO05D005251 4.4e-06 55.1 50 58.0
SGA_v2.0_scaffold103G30047 Striga asiatica HOM05D004433 ORTHO05D005251 5.7e-06 54.7 128 31.2
CANSAT21G2561 Cannabis sativa HOM05D004433 ORTHO05D005251 7.4e-06 54.3 81 40.7
MD08G1110200 Malus domestica HOM05D004433 ORTHO05D005251 7.4e-06 54.3 84 45.2
CANSAT21G1878 Cannabis sativa HOM05D004433 ORTHO05D005251 9.7e-06 53.9 82 40.2
Sopen08g019860 Solanum pennellii HOM05D004433 ORTHO05D005251 9.7e-06 53.9 52 57.7


User provided reference genes

Program Settings