Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE02G0598 Ceratophyllum demersum HOM05D004769 ORTHO05D005605 1.7e-93 345.9 161 100.0
CDE02G3274 Ceratophyllum demersum HOM05D004769 ORTHO05D005605 1.1e-76 290.0 137 97.1
ATR0083G043 Amborella trichopoda HOM05D004769 ORTHO05D005605 6.6e-74 280.8 137 91.2
PGR042G1215 Punica granatum HOM05D004769 ORTHO05D005605 8.6e-74 280.4 137 90.5
Lalb_Chr10g0104091 Lupinus albus HOM05D004769 ORTHO05D005605 1.9e-73 279.3 137 90.5
MBI04_g35346_MAGBIO Magnolia biondii HOM05D004769 ORTHO05D005605 1.9e-73 279.3 137 92.0
LjContig00141g0012428 Lotus japonicus HOM05D004769 ORTHO05D005605 3.3e-73 278.5 137 89.1
arahy.Tifrunner.gnm1.ann1.SAK0JK Arachis hypogaea HOM05D004769 ORTHO05D005605 5.6e-73 277.7 137 90.5
CiPaw.03G077600 Carya illinoinensis HOM05D004769 ORTHO05D005605 7.3e-73 277.3 137 89.8
Ca_05772_v3 Cicer arietinum L. HOM05D004769 ORTHO05D005605 7.3e-73 277.3 137 89.1
Aqoxy5G00268 Aquilegia oxysepala HOM05D004769 ORTHO05D005605 9.5e-73 276.9 137 91.2
Cfa007768 Carpinus fangiana HOM05D004769 ORTHO05D005605 9.5e-73 276.9 137 89.8
Lalb_Chr17g0345901 Lupinus albus HOM05D004769 ORTHO05D005605 9.5e-73 276.9 137 89.1
Phvul.008G239200 Phaseolus vulgaris HOM05D004769 ORTHO05D005605 9.5e-73 276.9 137 89.1
TAR375G0174 Trochodendron aralioides HOM05D004769 ORTHO05D005605 9.5e-73 276.9 137 88.3
Haze_14305 Corylus avellana HOM05D004769 ORTHO05D005605 1.2e-72 276.6 137 89.1
Lalb_Chr04g0251441 Lupinus albus HOM05D004769 ORTHO05D005605 1.2e-72 276.6 137 89.1
Medtr5g077180 Medicago truncatula HOM05D004769 ORTHO05D005605 1.2e-72 276.6 137 89.1
PSO017G5633 Papaver somniferum HOM05D004769 ORTHO05D005605 1.2e-72 276.6 137 89.8
TPR.G9995 Trifolium pratense HOM05D004769 ORTHO05D005605 1.2e-72 276.6 137 89.1
Gohir.A08G052900 Gossypium hirsutum HOM05D004769 ORTHO05D005605 2.1e-72 275.8 137 89.1
Gohir.D08G062500 Gossypium hirsutum HOM05D004769 ORTHO05D005605 2.1e-72 275.8 137 89.1
Gorai.004G064700 Gossypium raimondii HOM05D004769 ORTHO05D005605 2.1e-72 275.8 137 89.1
MELO3C025080.2 Cucumis melo HOM05D004769 ORTHO05D005605 2.8e-72 275.4 137 89.8
CsaV3_5G020660 Cucumis sativus L. HOM05D004769 ORTHO05D005605 2.8e-72 275.4 137 89.8
GSVIVG01026312001 Vitis vinifera HOM05D004769 ORTHO05D005605 2.8e-72 275.4 160 77.5
Actinidia35715 Actinidia chinensis HOM05D004769 ORTHO05D005605 3.6e-72 275.0 137 88.3
Glyma.02G241900 Glycine max HOM05D004769 ORTHO05D005605 4.7e-72 274.6 153 81.0
Glyma.14G211600 Glycine max HOM05D004769 ORTHO05D005605 4.7e-72 274.6 137 89.1
Hma1.2p1_0034F.1_g021310 Hydrangea macrophylla HOM05D004769 ORTHO05D005605 4.7e-72 274.6 159 78.6
Sc11g0004750 Simmondsia chinensis HOM05D004769 ORTHO05D005605 4.7e-72 274.6 136 88.2
Cpa.g.sc178.7 Carica papaya HOM05D004769 ORTHO05D005605 6.2e-72 274.2 160 77.5
Os05g0178900 Oryza sativa ssp. japonica HOM05D004769 ORTHO05D005605 8.1e-72 273.9 137 88.3
HPP92_017811 Vanilla planifolia HOM05D004769 ORTHO05D005605 1.1e-71 273.5 137 87.6
Thecc.04G060900 Theobroma cacao HOM05D004769 ORTHO05D005605 1.4e-71 273.1 137 88.3
vmacro20487 Vaccinium macrocarpon HOM05D004769 ORTHO05D005605 1.4e-71 273.1 137 88.3
CANSAT78G2338 Cannabis sativa HOM05D004769 ORTHO05D005605 1.8e-71 272.7 160 77.5
Rhsim10G0183300 Rhododendron simsii HOM05D004769 ORTHO05D005605 1.8e-71 272.7 137 88.3
TWI74G1557 Tripterygium wilfordii HOM05D004769 ORTHO05D005605 1.8e-71 272.7 137 89.1
ClCG01G008650 Citrullus lanatus HOM05D004769 ORTHO05D005605 3.1e-71 271.9 137 88.3
CSS0001926 Camellia sinensis var. sinensis HOM05D004769 ORTHO05D005605 5.2e-71 271.2 137 87.6
Prupe.1G069400 Prunus persica HOM05D004769 ORTHO05D005605 5.2e-71 271.2 137 88.3
Atru.chr1.1954 Acer truncatum HOM05D004769 ORTHO05D005605 8.9e-71 270.4 159 77.4
SHI30114 Sapria himalayana HOM05D002544 ORTHO05D007856 8.9e-71 270.4 160 77.5
VMungo0647G0921 Vigna mungo HOM05D004769 ORTHO05D005605 8.9e-71 270.4 133 89.5
TWI77G0470 Tripterygium wilfordii HOM05D004769 ORTHO05D005605 1.2e-70 270.0 137 87.6
Potri.017G144121 Populus trichocarpa HOM05D004769 ORTHO05D005605 2.0e-70 269.2 137 86.1
TAR374G1377 Trochodendron aralioides HOM05D004769 ORTHO05D005605 2.0e-70 269.2 137 86.9
RcHm_v2.0_Chr4g0398571 Rosa chinensis HOM05D004769 ORTHO05D005605 3.4e-70 268.5 137 85.4
Lsat_1_v5_gn_8_18601 Lactuca sativa HOM05D004769 ORTHO05D005605 4.4e-70 268.1 130 90.8
FAN07G0829 Fragaria x ananassa HOM05D004769 ORTHO05D005605 5.8e-70 267.7 137 84.7
COL.COLO4_05842 Corchorus olitorius HOM05D004769 ORTHO05D005605 7.6e-70 267.3 137 86.1
Cc07_g12960 Coffea canephora HOM05D004769 ORTHO05D005605 9.9e-70 266.9 136 85.3
Hma1.2p1_0158F.1_g069800 Hydrangea macrophylla HOM05D004769 ORTHO05D005605 9.9e-70 266.9 137 86.1
HanXRQChr08g0218471 Helianthus annuus HOM05D004769 ORTHO05D005605 1.3e-69 266.5 130 90.0
FvH4_4g06670 Fragaria vesca HOM05D004769 ORTHO05D005605 1.7e-69 266.2 137 83.9
FAN12G3741 Fragaria x ananassa HOM05D004769 ORTHO05D005605 1.7e-69 266.2 137 83.9
FAN22G0974 Fragaria x ananassa HOM05D004769 ORTHO05D005605 1.7e-69 266.2 137 83.9
FAN17G2568 Fragaria x ananassa HOM05D004769 ORTHO05D005605 2.2e-69 265.8 137 83.9
THA.LOC104823824 Tarenaya hassleriana HOM05D004769 ORTHO05D005605 2.2e-69 265.8 159 77.4
Potri.004G075700 Populus trichocarpa HOM05D004769 ORTHO05D005605 3.8e-69 265.0 137 85.4
Nitab4.5_0000574g0160 Nicotiana tabacum HOM05D004769 ORTHO05D005605 6.4e-69 264.2 144 81.9
Lj2C513G15 Lonicera japonica HOM05D004769 ORTHO05D005605 8.4e-69 263.8 130 90.0
CAN.G525.4 Capsicum annuum HOM05D004769 ORTHO05D005605 1.1e-68 263.5 144 81.9
Sed0006929 Sechium edule HOM05D004769 ORTHO05D005605 1.4e-68 263.1 163 75.5
Solyc04g014560.4 Solanum lycopersicum HOM05D004769 ORTHO05D005605 1.4e-68 263.1 144 81.9
Sopen04g006720 Solanum pennellii HOM05D004769 ORTHO05D005605 1.4e-68 263.1 144 81.9
PGSC0003DMG400023617 Solanum tuberosum HOM05D004769 ORTHO05D005605 1.4e-68 263.1 144 81.9
Lj4A255T24 Lonicera japonica HOM05D004769 ORTHO05D005605 3.2e-68 261.9 130 90.0
Peaxi162Scf00442g00627 Petunia axillaris HOM05D004769 ORTHO05D005605 3.2e-68 261.9 136 84.6
Dinv19070 Davidia involucrata HOM05D004769 ORTHO05D005605 4.1e-68 261.5 131 88.5
MapolyY_B0025 Marchantia polymorpha HOM05D004769 ORTHO05D005605 2.1e-67 259.2 160 73.1
Sabra04G0050400 Salix brachista HOM05D004769 ORTHO05D005605 4.6e-67 258.1 144 80.6
DCAR_028435 Daucus carota HOM05D004769 ORTHO05D005605 1.3e-66 256.5 130 87.7
Mapoly0017s0020 Marchantia polymorpha HOM05D004769 ORTHO05D005605 1.7e-66 256.1 160 72.5
MSTRG.3686 Avicennia marina HOM05D004769 ORTHO05D005605 3.0e-66 255.4 136 83.1
unitig_748.g7024 Utricularia gibba HOM05D004769 ORTHO05D005605 3.0e-66 255.4 136 83.1
SGA_v2.0_scaffold115G32089 Striga asiatica HOM05D004769 ORTHO05D005605 5.1e-66 254.6 136 83.8
SGA_v2.0_scaffold45G17131 Striga asiatica HOM05D004769 ORTHO05D005605 5.1e-66 254.6 136 83.8
Migut.H02243 Erythranthe guttata HOM05D004769 ORTHO05D005605 1.1e-65 253.4 136 83.1
AL7G46000 Arabidopsis lyrata HOM05D004769 ORTHO05D005605 2.5e-65 252.3 159 73.6
Sp7g05100 Schrenkiella parvula HOM05D004769 ORTHO05D005605 2.5e-65 252.3 159 73.6
EL10Ac6g13916 Beta vulgaris HOM05D004769 ORTHO05D005605 4.3e-65 251.5 158 74.1
Thhalv10027788m.g Eutrema salsugineum HOM05D004769 ORTHO05D005605 5.6e-65 251.1 159 73.0
Carub.0007s3249 Capsella rubella HOM05D004769 ORTHO05D005605 2.1e-64 249.2 159 72.3
BcaC02g09560 Brassica carinata HOM05D004769 ORTHO05D005605 2.8e-64 248.8 159 72.3
A04p10540 Brassica napus HOM05D004769 ORTHO05D005605 2.8e-64 248.8 159 72.3
C04p44180 Brassica napus HOM05D004769 ORTHO05D005605 2.8e-64 248.8 159 72.3
BolC4t25993H Brassica oleracea HOM05D004769 ORTHO05D005605 2.8e-64 248.8 159 72.3
BraA04t16720Z Brassica rapa HOM05D004769 ORTHO05D005605 2.8e-64 248.8 159 72.3
Zm00001eb377290 Zea mays HOM05D004769 ORTHO05D005605 2.8e-64 248.8 137 78.1
Ah.02g128700 Amaranthus hybridus HOM05D004769 ORTHO05D005605 6.2e-64 247.7 124 88.7
Oeu032315.1 Olea europaea HOM05D004769 ORTHO05D005605 6.2e-64 247.7 159 73.0
Pp3c14_14980 Physcomitrium patens HOM05D004769 ORTHO05D005605 8.1e-64 247.3 159 69.2
Pp3c14_14989 Physcomitrium patens HOM05D004769 ORTHO05D005605 8.1e-64 247.3 159 69.2
Ciclev10018227m.g Citrus clementina HOM05D004769 ORTHO05D005605 1.4e-63 246.5 144 78.5
Migut.K01113 Erythranthe guttata HOM05D004769 ORTHO05D005605 1.8e-63 246.1 159 70.4
CBR_g22246 Chara braunii HOM05D004769 ORTHO05D005605 2.4e-63 245.7 160 69.4
SMO351G0501 Selaginella moellendorffii HOM05D004769 ORTHO05D005605 2.6e-62 242.3 136 77.2
ECA233G3826 Erigeron canadensis HOM05D000002 ORTHO05D000001 3.4e-62 241.9 118 88.1
MD13G1237000 Malus domestica HOM05D004769 ORTHO05D005605 9.9e-62 240.4 118 89.0
MD16G1242400 Malus domestica HOM05D004769 ORTHO05D005605 9.9e-62 240.4 118 89.0
Nn1g02020 Nelumbo nucifera HOM05D004769 ORTHO05D005605 4.9e-61 238.0 135 78.5
AUR62032521 Chenopodium quinoa HOM05D004769 ORTHO05D005605 8.4e-61 237.3 118 87.3
AUR62017457 Chenopodium quinoa HOM05D004769 ORTHO05D005605 1.4e-60 236.5 118 87.3
QL02p060102 Quercus lobata HOM05D004769 ORTHO05D005605 4.6e-59 231.5 143 76.2
Oeu029083.1 Olea europaea HOM05D004769 ORTHO05D005605 1.9e-57 226.1 212 54.7
Lj1g0013060 Lotus japonicus HOM05D004769 ORTHO05D005605 1.5e-54 216.5 165 65.5
Oeu048972.1 Olea europaea HOM05D004769 ORTHO05D005605 1.9e-52 209.5 111 85.6
Sed0001997 Sechium edule HOM05D004769 ORTHO05D005605 2.4e-47 192.6 102 84.3
Gohir.A02G124601 Gossypium hirsutum HOM05D004769 ORTHO05D005605 1.9e-44 183.0 97 87.6
CARHR215720 Cardamine hirsuta HOM05D004769 ORTHO05D005605 7.1e-44 181.0 111 73.0
Cre03.g178300 Chlamydomonas reinhardtii HOM05D004769 ORTHO05D005605 1.0e-42 177.2 139 60.4
Aa31LG9G17630 Aethionema arabicum HOM05D004769 ORTHO05D005605 1.9e-41 172.9 96 81.2
PSO170G3102 Papaver somniferum HOM05D004769 ORTHO05D005605 2.5e-41 172.6 83 89.2
Eucgr.J01630 Eucalyptus grandis HOM05D004769 ORTHO05D005605 5.6e-41 171.4 106 73.6
MCO07G113 Micromonas commoda HOM05D004769 ORTHO05D005605 5.6e-41 171.4 133 55.6
SMO231G0020 Selaginella moellendorffii HOM05D004769 ORTHO05D005605 7.4e-41 171.0 129 62.0
PRCOL_00000163 Prasinoderma coloniale HOM05D004769 ORTHO05D005605 2.4e-39 166.0 157 49.0
CSS0045560 Camellia sinensis var. sinensis HOM05D004769 ORTHO05D005605 3.1e-39 165.6 83 83.1
Zm00001eb361740 Zea mays HOM05D004769 ORTHO05D005605 3.1e-39 165.6 97 77.3
Zm00001eb046660 Zea mays HOM05D004769 ORTHO05D005605 4.9e-37 158.3 84 82.1
Gohir.A11G193800 Gossypium hirsutum HOM05D004769 ORTHO05D005605 1.4e-36 156.8 86 84.9
Pp3c17_5870 Physcomitrium patens HOM05D004769 ORTHO05D005605 1.4e-36 156.8 106 65.1
Zm00001eb221230 Zea mays HOM05D004769 ORTHO05D005605 2.7e-35 152.5 83 80.7
HanXRQChr14g0429111 Helianthus annuus HOM05D004769 ORTHO05D005605 2.5e-33 146.0 80 83.8
MD01G1153700 Malus domestica HOM05D004769 ORTHO05D005605 2.2e-32 142.9 80 83.8
HanXRQChr14g0429051 Helianthus annuus HOM05D004769 ORTHO05D005605 1.1e-31 140.6 80 81.2
Gohir.A08G086562 Gossypium hirsutum HOM05D004769 ORTHO05D005605 1.0e-26 124.0 81 75.3
HanXRQChr08g0224021 Helianthus annuus HOM05D004769 ORTHO05D005605 5.5e-20 101.7 60 80.0
Sed0026946 Sechium edule HOM05D004769 ORTHO05D005605 6.3e-16 88.2 41 87.8
Lj2g0009880 Lotus japonicus HOM05D004769 ORTHO05D005605 8.2e-16 87.8 41 85.4
SEGI_40758 Sequoiadendron giganteum HOM05D004769 ORTHO05D005605 8.2e-16 87.8 41 87.8
Lj1g0013083 Lotus japonicus HOM05D004769 ORTHO05D005605 1.2e-14 84.0 41 82.9
Dinv28230 Davidia involucrata HOM05D004769 ORTHO05D005605 1.5e-14 83.6 63 58.7
Nitab4.5_0005193g0040 Nicotiana tabacum HOM05D004769 ORTHO05D005605 5.9e-14 81.6 49 69.4
SMO231G0026 Selaginella moellendorffii HOM05D004769 ORTHO05D005605 2.2e-13 79.7 61 60.7
Zm00001eb313200 Zea mays HOM05D004769 ORTHO05D005605 4.2e-12 75.5 43 79.1
CDE02G1258 Ceratophyllum demersum HOM05D004769 ORTHO05D005605 3.1e-07 59.3 25 96.0


User provided reference genes

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