Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE01G0267 Ceratophyllum demersum HOM05D006608 ORTHO05D008316 6.7e-215 750.7 378 100.0
CDE12G0684 Ceratophyllum demersum HOM05D006608 ORTHO05D008316 5.1e-114 415.6 245 86.1
THA.LOC104820562 Tarenaya hassleriana HOM05D006608 ORTHO05D008316 5.5e-92 342.4 275 64.7
MBI18_g27388_MAGBIO Magnolia biondii HOM05D006608 ORTHO05D008316 4.6e-91 339.3 283 62.9
HanXRQChr09g0247441 Helianthus annuus HOM05D006608 ORTHO05D008316 3.9e-90 336.3 240 70.4
COL.COLO4_05523 Corchorus olitorius HOM05D006608 ORTHO05D008316 5.1e-90 335.9 211 76.3
CSS0011542 Camellia sinensis var. sinensis HOM05D006608 ORTHO05D008316 8.7e-90 335.1 211 77.3
Cfa006713 Carpinus fangiana HOM05D006608 ORTHO05D008316 1.1e-89 334.7 211 77.7
Potri.005G010700 Populus trichocarpa HOM05D006608 ORTHO05D008316 2.5e-89 333.6 211 75.8
Haze_04048 Corylus avellana HOM05D006608 ORTHO05D008316 4.3e-89 332.8 211 77.3
PSO210G3601 Papaver somniferum HOM05D006608 ORTHO05D008316 9.7e-89 331.6 273 63.4
Duzib177G0608 Durio zibethinus HOM05D006608 ORTHO05D008316 1.3e-88 331.3 274 63.1
Dinv30914 Davidia involucrata HOM05D006608 ORTHO05D008316 1.6e-88 330.9 205 78.5
Gohir.A13G176500 Gossypium hirsutum HOM05D006608 ORTHO05D008316 1.6e-88 330.9 230 71.3
Sabra05G0007800 Salix brachista HOM05D006608 ORTHO05D008316 1.6e-88 330.9 215 74.0
Sabra05G0019000 Salix brachista HOM05D006608 ORTHO05D008316 1.6e-88 330.9 215 74.0
Gorai.013G208300 Gossypium raimondii HOM05D006608 ORTHO05D008316 2.8e-88 330.1 216 74.1
Potri.013G006500 Populus trichocarpa HOM05D006608 ORTHO05D008316 3.7e-88 329.7 211 75.4
CiPaw.08G154200 Carya illinoinensis HOM05D006608 ORTHO05D008316 4.8e-88 329.3 211 76.3
TAR362G0553 Trochodendron aralioides HOM05D006608 ORTHO05D008316 4.8e-88 329.3 277 63.5
Manes.08G109600 Manihot esculenta HOM05D006608 ORTHO05D008316 6.3e-88 328.9 222 71.6
PGR031G0497 Punica granatum HOM05D006608 ORTHO05D008316 8.2e-88 328.6 221 73.3
QL03p016892 Quercus lobata HOM05D006608 ORTHO05D008316 1.8e-87 327.4 211 75.4
PSO761G0023 Papaver somniferum HOM05D006608 ORTHO05D008316 2.4e-87 327.0 275 62.9
MSTRG.16414 Avicennia marina HOM05D006608 ORTHO05D008316 3.1e-87 326.6 263 64.3
TWI12G0784 Tripterygium wilfordii HOM05D006608 ORTHO05D008316 4.1e-87 326.2 274 62.8
MD04G1191200 Malus domestica HOM05D006608 ORTHO05D008316 5.3e-87 325.9 231 69.7
Prupe.6G309700 Prunus persica HOM05D006608 ORTHO05D008316 5.3e-87 325.9 212 74.1
Cc02_g35130 Coffea canephora HOM05D006608 ORTHO05D008316 9.0e-87 325.1 210 75.2
FAN09G0299 Fragaria x ananassa HOM05D002543 ORTHO05D002990 9.0e-87 325.1 214 72.4
Sabra13G0005500 Salix brachista HOM05D006608 ORTHO05D008316 9.0e-87 325.1 211 75.4
Lj2g0018741 Lotus japonicus HOM05D006608 ORTHO05D008316 1.5e-86 324.3 210 74.8
GSVIVG01031268001 Vitis vinifera HOM05D006608 ORTHO05D008316 1.5e-86 324.3 210 75.7
MD12G1203800 Malus domestica HOM05D006608 ORTHO05D008316 2.0e-86 323.9 209 75.1
Aqoxy2G02631 Aquilegia oxysepala HOM05D006608 ORTHO05D008316 2.6e-86 323.6 273 61.2
Thecc.05G325800 Theobroma cacao HOM05D006608 ORTHO05D008316 2.6e-86 323.6 211 74.4
Peaxi162Scf00299g00341 Petunia axillaris HOM05D006608 ORTHO05D008316 3.4e-86 323.2 234 71.4
Ciclev10002108m.g Citrus clementina HOM05D006608 ORTHO05D008316 4.5e-86 322.8 211 74.4
DCAR_002111 Daucus carota HOM05D006608 ORTHO05D008316 4.5e-86 322.8 222 70.7
ECA240G1520 Erigeron canadensis HOM05D006608 ORTHO05D008316 5.9e-86 322.4 210 72.9
Ca_09291_v3 Cicer arietinum L. HOM05D006608 ORTHO05D008316 7.6e-86 322.0 215 70.7
Eucgr.H01287 Eucalyptus grandis HOM05D006608 ORTHO05D008316 1.0e-85 321.6 208 73.6
Lalb_Chr04g0260371 Lupinus albus HOM05D006608 ORTHO05D008316 1.3e-85 321.2 215 71.6
Migut.B00927 Erythranthe guttata HOM05D006608 ORTHO05D008316 1.7e-85 320.9 212 75.5
PGSC0003DMG400010682 Solanum tuberosum HOM05D006608 ORTHO05D008316 1.7e-85 320.9 248 65.7
Actinidia35508 Actinidia chinensis HOM05D006608 ORTHO05D008316 2.2e-85 320.5 213 73.2
ClCG01G010870 Citrullus lanatus HOM05D006608 ORTHO05D008316 2.2e-85 320.5 225 71.1
VMungo1383G0735 Vigna mungo HOM05D006608 ORTHO05D008316 2.2e-85 320.5 210 74.8
SGA_v2.0_scaffold4G01979 Striga asiatica HOM05D006608 ORTHO05D008316 2.9e-85 320.1 210 76.2
CANSAT54G1874 Cannabis sativa HOM05D006608 ORTHO05D008316 5.0e-85 319.3 211 73.0
Glyma.03G230300 Glycine max HOM05D006608 ORTHO05D008316 6.5e-85 318.9 210 74.3
Sed0000881 Sechium edule HOM05D006608 ORTHO05D008316 6.5e-85 318.9 275 61.5
Zm00001eb028550 Zea mays HOM05D006608 ORTHO05D008316 6.5e-85 318.9 224 72.3
CAN.G504.78 Capsicum annuum HOM05D006608 ORTHO05D008316 8.5e-85 318.5 248 67.3
FAN02G2060 Fragaria x ananassa HOM05D006608 ORTHO05D008316 8.5e-85 318.5 211 71.6
FAN14G1365 Fragaria x ananassa HOM05D006608 ORTHO05D008316 1.4e-84 317.8 243 65.0
Phvul.001G224100 Phaseolus vulgaris HOM05D006608 ORTHO05D008316 1.4e-84 317.8 210 74.3
Solyc01g106090.3 Solanum lycopersicum HOM05D006608 ORTHO05D008316 1.9e-84 317.4 250 65.6
RcHm_v2.0_Chr3g0457591 Rosa chinensis HOM05D006608 ORTHO05D008316 2.5e-84 317.0 211 71.1
Lsat_1_v5_gn_7_65241 Lactuca sativa HOM05D006608 ORTHO05D008316 3.2e-84 316.6 209 74.2
CsaV3_1G015710 Cucumis sativus L. HOM05D006608 ORTHO05D008316 4.2e-84 316.2 219 71.7
vmacro01585 Vaccinium macrocarpon HOM05D006608 ORTHO05D008316 4.2e-84 316.2 211 73.9
SalBow5G2350 Salvia bowleyana HOM05D006608 ORTHO05D008316 9.3e-84 315.1 207 73.9
Sopen01g048480 Solanum pennellii HOM05D006608 ORTHO05D008316 9.3e-84 315.1 249 65.5
C01p27450 Brassica napus HOM05D006608 ORTHO05D008316 1.2e-83 314.7 212 75.0
FAN05G5720 Fragaria x ananassa HOM05D006608 ORTHO05D008316 1.2e-83 314.7 211 71.6
Nitab4.5_0002750g0060 Nicotiana tabacum HOM05D006608 ORTHO05D008316 1.2e-83 314.7 249 65.5
arahy.Tifrunner.gnm1.ann1.7ZK9KC Arachis hypogaea HOM05D006608 ORTHO05D008316 1.6e-83 314.3 236 67.4
ATR0706G264 Amborella trichopoda HOM05D006608 ORTHO05D008316 2.7e-83 313.5 187 78.6
arahy.Tifrunner.gnm1.ann1.V41D0B Arachis hypogaea HOM05D006608 ORTHO05D008316 2.7e-83 313.5 236 66.9
Nitab4.5_0005908g0020 Nicotiana tabacum HOM05D006608 ORTHO05D008316 7.9e-83 312.0 212 72.6
BolC8t48283H Brassica oleracea HOM05D006608 ORTHO05D008316 1.0e-82 311.6 240 68.8
Thhalv10025982m.g Eutrema salsugineum HOM05D006608 ORTHO05D008316 1.0e-82 311.6 273 62.3
Psat3g014240 Pisum sativum HOM05D006608 ORTHO05D008316 1.0e-82 311.6 215 69.3
arahy.Tifrunner.gnm1.ann1.0RV1NN Arachis hypogaea HOM05D006608 ORTHO05D008316 1.8e-82 310.8 222 69.4
A08p11770 Brassica napus HOM05D006608 ORTHO05D008316 1.8e-82 310.8 214 74.8
BraA08t33169Z Brassica rapa HOM05D006608 ORTHO05D008316 1.8e-82 310.8 214 74.8
Ah.04g158480 Amaranthus hybridus HOM05D006608 ORTHO05D008316 2.3e-82 310.5 211 71.6
Hund21858 Selenicereus undatus HOM05D006608 ORTHO05D008316 2.3e-82 310.5 211 72.5
A01p22060 Brassica napus HOM05D006608 ORTHO05D008316 3.0e-82 310.1 212 74.1
arahy.Tifrunner.gnm1.ann1.FYW6BY Arachis hypogaea HOM05D006608 ORTHO05D008316 5.1e-82 309.3 222 68.9
Rhsim11G0098400 Rhododendron simsii HOM05D006608 ORTHO05D008316 5.1e-82 309.3 233 68.2
Cpa.g.sc48.186 Carica papaya HOM05D006608 ORTHO05D008316 8.7e-82 308.5 202 74.8
BolC1t02685H Brassica oleracea HOM05D006608 ORTHO05D008316 1.1e-81 308.1 222 70.7
AUR62006773 Chenopodium quinoa HOM05D006608 ORTHO05D008316 1.1e-81 308.1 211 73.0
MELO3C026109.2 Cucumis melo HOM05D006608 ORTHO05D008316 1.5e-81 307.8 204 74.0
BcaC09g50245 Brassica carinata HOM05D006608 ORTHO05D008316 1.9e-81 307.4 194 77.8
FvH4_6g07900 Fragaria vesca HOM05D006608 ORTHO05D008316 2.5e-81 307.0 205 70.7
BcaC07g37888 Brassica carinata HOM05D006608 ORTHO05D008316 3.3e-81 306.6 218 72.5
Medtr7g111880 Medicago truncatula HOM05D006608 ORTHO05D008316 3.3e-81 306.6 211 70.1
Sp7g13760 Schrenkiella parvula HOM05D006608 ORTHO05D008316 4.3e-81 306.2 212 72.2
Os07g0275100 Oryza sativa ssp. japonica HOM05D006608 ORTHO05D008316 9.7e-81 305.1 222 70.7
AL7G40010 Arabidopsis lyrata HOM05D006608 ORTHO05D008316 1.3e-80 304.7 208 71.6
CARHR222300 Cardamine hirsuta HOM05D006608 ORTHO05D008316 1.6e-80 304.3 226 69.0
Aa31LG2G11410 Aethionema arabicum HOM05D006608 ORTHO05D008316 2.2e-80 303.9 209 71.3
Lj9A306T68 Lonicera japonica HOM05D006608 ORTHO05D008316 2.2e-80 303.9 189 76.7
Gohir.D13G182950 Gossypium hirsutum HOM05D006608 ORTHO05D008316 2.8e-80 303.5 216 69.9
AT4G15510 Arabidopsis thaliana HOM05D006608 ORTHO05D008316 3.7e-80 303.1 205 72.2
EL10Ac4g09502 Beta vulgaris HOM05D006608 ORTHO05D008316 6.3e-80 302.4 211 71.6
TPR.G1650 Trifolium pratense HOM05D006608 ORTHO05D008316 6.3e-80 302.4 210 68.6
Carub.0007s2637 Capsella rubella HOM05D006608 ORTHO05D008316 1.8e-79 300.8 205 71.7
Nn4g25453 Nelumbo nucifera HOM05D006608 ORTHO05D008316 6.9e-79 298.9 212 69.8
BcaB04g18298 Brassica carinata HOM05D006608 ORTHO05D008316 9.1e-79 298.5 178 79.8
BcaNung00268 Brassica carinata HOM05D006608 ORTHO05D008316 1.5e-78 297.7 208 74.0
Mapoly0002s0119 Marchantia polymorpha HOM05D006608 ORTHO05D008316 1.8e-74 284.3 211 66.4
SEGI_38534 Sequoiadendron giganteum HOM05D006608 ORTHO05D008316 6.7e-74 282.3 204 68.6
unitig_0.g2226 Utricularia gibba HOM05D006608 ORTHO05D008316 6.7e-74 282.3 207 68.6
BcaC09g50241 Brassica carinata HOM05D006608 ORTHO05D008316 7.4e-73 278.9 202 69.8
Pp3c25_7030 Physcomitrium patens HOM05D006608 ORTHO05D008316 1.0e-66 258.5 209 63.2
Oeu019844.1 Olea europaea HOM05D006608 ORTHO05D008316 1.3e-61 241.5 189 66.1
SMO203G0012 Selaginella moellendorffii HOM05D006608 ORTHO05D008316 4.7e-59 233.0 179 60.3
CBR_g54968 Chara braunii HOM05D006608 ORTHO05D008316 6.3e-56 222.6 171 63.2
Os12g0564400 Oryza sativa ssp. japonica HOM05D006608 ORTHO05D008316 9.8e-49 198.7 149 67.8
Sc09g0002570 Simmondsia chinensis HOM05D006608 ORTHO05D008316 4.5e-46 189.9 132 68.2
AUR62000427 Chenopodium quinoa HOM05D006608 ORTHO05D008316 4.2e-44 183.3 111 81.1
Cre08.g362900 Chlamydomonas reinhardtii HOM05D006608 ORTHO05D008316 8.0e-43 179.1 218 45.4
MCO08G333 Micromonas commoda HOM05D006608 ORTHO05D008316 5.4e-39 166.4 204 46.1
PRCOL_00003409 Prasinoderma coloniale HOM05D006608 ORTHO05D008316 9.2e-23 112.5 171 35.1
Os07g0275901 Oryza sativa ssp. japonica HOM05D006608 ORTHO05D008316 1.5e-20 105.1 75 76.0
Glyma.19G227402 Glycine max HOM05D006608 ORTHO05D008316 1.8e-18 98.2 110 47.3
Os07g0275801 Oryza sativa ssp. japonica HOM05D006608 ORTHO05D008316 5.8e-17 93.2 54 81.5
HPP92_017019 Vanilla planifolia HOM05D002543 ORTHO05D002990 1.6e-11 75.1 65 56.9
SEGI_36156 Sequoiadendron giganteum HOM05D002933 ORTHO05D007742 1.9e-07 61.6 192 27.6
PSO339G0478 Papaver somniferum HOM05D002933 ORTHO05D009221 7.8e-06 56.2 248 21.4


User provided reference genes

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