Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CBR_g8449 Chara braunii HOM05D004661 ORTHO05D005827 2.9e-137 491.9 247 100.0
Mapoly0005s0266 Marchantia polymorpha HOM05D004661 ORTHO05D005827 3.2e-43 179.5 240 47.9
SEGI_24481 Sequoiadendron giganteum HOM05D004661 ORTHO05D005827 1.3e-41 174.1 243 46.9
Prupe.1G527400 Prunus persica HOM05D004661 ORTHO05D005827 3.9e-41 172.6 243 46.1
SMO361G0338 Selaginella moellendorffii HOM05D004661 ORTHO05D005827 1.9e-40 170.2 242 44.6
FAN04G0711 Fragaria x ananassa HOM05D004661 ORTHO05D005827 5.6e-40 168.7 242 43.8
MELO3C003537.2 Cucumis melo HOM05D004661 ORTHO05D005827 7.3e-40 168.3 242 44.6
FAN13G1835 Fragaria x ananassa HOM05D004661 ORTHO05D005827 9.6e-40 167.9 242 43.0
GSVIVG01009135001 Vitis vinifera HOM05D004661 ORTHO05D005827 3.6e-39 166.0 243 47.3
RcHm_v2.0_Chr7g0237521 Rosa chinensis HOM05D004661 ORTHO05D005827 4.8e-39 165.6 242 43.0
Sed0023876 Sechium edule HOM05D004661 ORTHO05D005827 8.1e-39 164.9 242 44.2
MD08G1192800 Malus domestica HOM05D004661 ORTHO05D005827 1.1e-38 164.5 242 46.3
FvH4_5g35830 Fragaria vesca HOM05D004661 ORTHO05D005827 2.4e-38 163.3 242 43.4
FAN18G2343 Fragaria x ananassa HOM05D004661 ORTHO05D005827 3.1e-38 162.9 242 43.0
Pp3c15_6410 Physcomitrium patens HOM05D004661 ORTHO05D005827 3.1e-38 162.9 242 45.9
CsaV3_3G047860 Cucumis sativus L. HOM05D004661 ORTHO05D005827 6.9e-38 161.8 242 44.6
Gohir.A06G032640 Gossypium hirsutum HOM05D004661 ORTHO05D005827 6.9e-38 161.8 244 45.9
ATR0022G055 Amborella trichopoda HOM05D004661 ORTHO05D005827 9.0e-38 161.4 243 45.7
Thecc.08G067600 Theobroma cacao HOM05D004661 ORTHO05D005827 9.0e-38 161.4 246 43.9
AagrBONN_evm.TU.Sc2ySwM_228.1068 Anthoceros agrestis HOM05D004661 ORTHO05D005827 1.5e-37 160.6 242 43.4
MD15G1381500 Malus domestica HOM05D004661 ORTHO05D005827 2.0e-37 160.2 243 44.9
Sp6g32550 Schrenkiella parvula HOM05D004661 ORTHO05D005827 2.0e-37 160.2 243 44.0
Sed0012148 Sechium edule HOM05D004661 ORTHO05D005827 2.6e-37 159.8 242 43.0
EL10Ac1g01103 Beta vulgaris HOM05D004661 ORTHO05D005827 3.4e-37 159.5 247 43.3
Ciclev10000370m.g Citrus clementina HOM05D004661 ORTHO05D005827 3.4e-37 159.5 247 45.3
Duzib093G2117 Durio zibethinus HOM05D004661 ORTHO05D005827 3.4e-37 159.5 245 44.5
MBI06_g42714_MAGBIO Magnolia biondii HOM05D004661 ORTHO05D005827 5.8e-37 158.7 242 44.6
QL09p017125 Quercus lobata HOM05D004661 ORTHO05D005827 5.8e-37 158.7 244 44.7
Aqoxy5G01331 Aquilegia oxysepala HOM05D004661 ORTHO05D005827 9.9e-37 157.9 243 44.9
CiPaw.08G054000 Carya illinoinensis HOM05D004661 ORTHO05D005827 9.9e-37 157.9 244 45.1
Gorai.010G036000 Gossypium raimondii HOM05D004661 ORTHO05D005827 1.7e-36 157.1 245 44.5
A10p26740 Brassica napus HOM05D004661 ORTHO05D005827 2.2e-36 156.8 242 43.0
Gohir.D06G032700 Gossypium hirsutum HOM05D004661 ORTHO05D005827 2.9e-36 156.4 245 44.5
Nn5g29943 Nelumbo nucifera HOM05D004661 ORTHO05D005827 2.9e-36 156.4 243 44.4
BcaC04g19274 Brassica carinata HOM05D004661 ORTHO05D005827 3.8e-36 156.0 242 43.0
Aa31LG3G16190 Aethionema arabicum HOM05D004661 ORTHO05D005827 4.9e-36 155.6 244 43.4
C09p65890 Brassica napus HOM05D004661 ORTHO05D005827 1.4e-35 154.1 242 42.6
Nitab4.5_0001507g0080 Nicotiana tabacum HOM05D004661 ORTHO05D005827 1.4e-35 154.1 225 46.2
BraA10t44730Z Brassica rapa HOM05D004661 ORTHO05D005827 1.9e-35 153.7 244 42.2
Atru.chr13.1049 Acer truncatum HOM05D004661 ORTHO05D005827 2.4e-35 153.3 242 43.0
BolC9t59411H Brassica oleracea HOM05D004661 ORTHO05D005827 3.2e-35 152.9 244 42.2
CSS0032958 Camellia sinensis var. sinensis HOM05D004661 ORTHO05D005827 3.2e-35 152.9 242 43.0
Carub.0006s0943 Capsella rubella HOM05D004661 ORTHO05D005827 3.2e-35 152.9 246 43.1
COL.COLO4_35194 Corchorus olitorius HOM05D004661 ORTHO05D005827 3.2e-35 152.9 245 44.1
Thhalv10012761m.g Eutrema salsugineum HOM05D004661 ORTHO05D005827 3.2e-35 152.9 246 43.9
Solyc04g076020.3 Solanum lycopersicum HOM05D004661 ORTHO05D005827 3.2e-35 152.9 224 44.2
Sopen04g029970 Solanum pennellii HOM05D004661 ORTHO05D005827 7.1e-35 151.8 225 45.3
THA.LOC104799016 Tarenaya hassleriana HOM05D004661 ORTHO05D005827 7.1e-35 151.8 249 45.0
TPR.G26024 Trifolium pratense HOM05D004661 ORTHO05D005827 7.1e-35 151.8 242 43.8
Lj1g0004448 Lotus japonicus HOM05D004661 ORTHO05D005827 9.3e-35 151.4 242 45.5
CARHR202350 Cardamine hirsuta HOM05D004661 ORTHO05D005827 1.6e-34 150.6 242 42.6
Cfa013702 Carpinus fangiana HOM05D004661 ORTHO05D005827 1.6e-34 150.6 244 43.0
AUR62019009 Chenopodium quinoa HOM05D004661 ORTHO05D005827 1.6e-34 150.6 242 43.8
Gohir.D05G224100 Gossypium hirsutum HOM05D004661 ORTHO05D005827 1.6e-34 150.6 244 44.3
Gorai.009G231600 Gossypium raimondii HOM05D004661 ORTHO05D005827 1.6e-34 150.6 244 44.3
Manes.02G147000 Manihot esculenta HOM05D004661 ORTHO05D005827 1.6e-34 150.6 242 41.7
PSO210G1320 Papaver somniferum HOM05D004661 ORTHO05D005827 2.1e-34 150.2 244 43.4
MSTRG.22174 Avicennia marina HOM05D004661 ORTHO05D005827 2.7e-34 149.8 241 44.8
Sc26g0000230 Simmondsia chinensis HOM05D004661 ORTHO05D005827 2.7e-34 149.8 242 41.3
Ca_15986_v3 Cicer arietinum L. HOM05D004661 ORTHO05D005827 4.6e-34 149.1 242 44.2
Oeu016837.1 Olea europaea HOM05D004661 ORTHO05D005827 4.6e-34 149.1 243 43.6
AT5G10940 Arabidopsis thaliana HOM05D004661 ORTHO05D005827 6.0e-34 148.7 243 43.2
Psat5g045560 Pisum sativum HOM05D004661 ORTHO05D005827 6.0e-34 148.7 242 45.0
AL6G21500 Arabidopsis lyrata HOM05D004661 ORTHO05D005827 7.9e-34 148.3 245 43.3
Actinidia10366 Actinidia chinensis HOM05D004661 ORTHO05D005827 1.3e-33 147.5 250 42.0
Peaxi162Scf00281g00711 Petunia axillaris HOM05D004661 ORTHO05D005827 1.3e-33 147.5 224 43.8
TAR376G0508 Trochodendron aralioides HOM05D004661 ORTHO05D005827 1.7e-33 147.1 243 42.4
AUR62027850 Chenopodium quinoa HOM05D004661 ORTHO05D005827 2.3e-33 146.7 242 41.3
DCAR_012867 Daucus carota HOM05D004661 ORTHO05D005827 2.3e-33 146.7 241 42.7
Rhsim06G0074200 Rhododendron simsii HOM05D004661 ORTHO05D005827 2.3e-33 146.7 242 43.4
Cpa.g.sc608.2 Carica papaya HOM05D004661 ORTHO05D005827 3.0e-33 146.4 244 43.0
Potri.005G158300 Populus trichocarpa HOM05D004661 ORTHO05D005827 3.0e-33 146.4 241 41.9
THA.LOC104814992 Tarenaya hassleriana HOM05D004661 ORTHO05D005827 3.0e-33 146.4 246 44.3
TAR628G0590 Trochodendron aralioides HOM05D004661 ORTHO05D005827 5.1e-33 145.6 243 41.6
Cc10_g15570 Coffea canephora HOM05D004661 ORTHO05D005827 8.7e-33 144.8 244 42.6
TWI12G0736 Tripterygium wilfordii HOM05D004661 ORTHO05D005827 8.7e-33 144.8 243 42.8
HPP92_009332 Vanilla planifolia HOM05D004661 ORTHO05D005827 8.7e-33 144.8 244 43.0
Gohir.A05G221400 Gossypium hirsutum HOM05D004661 ORTHO05D005827 1.1e-32 144.4 244 43.4
Glyma.04G093100 Glycine max HOM05D004661 ORTHO05D005827 1.5e-32 144.1 242 43.4
Phvul.009G038100 Phaseolus vulgaris HOM05D004661 ORTHO05D005827 1.5e-32 144.1 242 43.0
Medtr3g100690 Medicago truncatula HOM05D004661 ORTHO05D005827 1.9e-32 143.7 242 43.4
Eucgr.F02126 Eucalyptus grandis HOM05D004661 ORTHO05D005827 5.6e-32 142.1 243 43.6
VMungo1309G0150 Vigna mungo HOM05D004661 ORTHO05D005827 5.6e-32 142.1 242 43.0
Nitab4.5_0006922g0020 Nicotiana tabacum HOM05D004661 ORTHO05D005827 1.3e-31 141.0 228 43.4
CANSAT25G3216 Cannabis sativa HOM05D004661 ORTHO05D005827 1.6e-31 140.6 244 42.2
ECA247G4144 Erigeron canadensis HOM05D004661 ORTHO05D005827 2.1e-31 140.2 242 42.1
Glyma.06G094900 Glycine max HOM05D004661 ORTHO05D005827 2.8e-31 139.8 242 43.0
HanXRQChr02g0047021 Helianthus annuus HOM05D004661 ORTHO05D005827 2.8e-31 139.8 242 41.7
Lalb_Chr23g0270111 Lupinus albus HOM05D004661 ORTHO05D005827 6.2e-31 138.7 247 40.9
Lsat_1_v5_gn_1_2220 Lactuca sativa HOM05D004661 ORTHO05D005827 8.1e-31 138.3 242 42.1
PGR042G3759 Punica granatum HOM05D004661 ORTHO05D005827 8.1e-31 138.3 255 42.4
Migut.N02866 Erythranthe guttata HOM05D004661 ORTHO05D005827 1.8e-30 137.1 241 42.3
Hund27004 Selenicereus undatus HOM05D004661 ORTHO05D005827 2.0e-29 133.7 243 40.7
Ah.05g170630 Amaranthus hybridus HOM05D004661 ORTHO05D005827 4.5e-29 132.5 242 39.7
Zm00001eb006570 Zea mays HOM05D004661 ORTHO05D005827 5.8e-29 132.1 243 40.3
SGA_v2.0_scaffold84G26469 Striga asiatica HOM05D004661 ORTHO05D005827 9.9e-29 131.3 240 42.5
vmacro21311 Vaccinium macrocarpon HOM05D004661 ORTHO05D005827 1.3e-28 131.0 284 37.3
Zm00001eb401530 Zea mays HOM05D004661 ORTHO05D005827 6.4e-28 128.6 242 40.1
arahy.Tifrunner.gnm1.ann1.D85VJY Arachis hypogaea HOM05D004661 ORTHO05D005827 1.4e-27 127.5 271 36.5
Lj4A732G49 Lonicera japonica HOM05D004661 ORTHO05D005827 1.9e-27 127.1 242 39.3
arahy.Tifrunner.gnm1.ann1.438KDZ Arachis hypogaea HOM05D004661 ORTHO05D005827 9.3e-27 124.8 279 35.8
CDE10G1141 Ceratophyllum demersum HOM05D004661 ORTHO05D005827 1.6e-26 124.0 243 37.4
Duzib041G0224 Durio zibethinus HOM05D004661 ORTHO05D005827 1.1e-24 117.9 201 40.3
SHI23737 Sapria himalayana HOM05D004661 ORTHO05D005827 1.4e-22 110.9 115 53.0
Actinidia25390 Actinidia chinensis HOM05D004661 ORTHO05D005827 4.0e-22 109.4 130 50.8
Phvul.010G090900 Phaseolus vulgaris HOM05D004661 ORTHO05D005827 1.4e-19 100.9 151 44.4
Phvul.008G143100 Phaseolus vulgaris HOM05D004661 ORTHO05D005827 6.0e-18 95.5 107 50.5
CDE10G0373 Ceratophyllum demersum HOM05D001083 ORTHO05D006562 2.5e-16 90.1 66 66.7
Haze_22346 Corylus avellana HOM05D004661 ORTHO05D005827 1.2e-13 81.3 248 31.5
Actinidia30809 Actinidia chinensis HOM05D004661 ORTHO05D005827 2.6e-13 80.1 196 34.2
MBI18_g04909_MAGBIO Magnolia biondii HOM05D004661 ORTHO05D016624 3.0e-09 66.6 174 32.8
HPP92_009252 Vanilla planifolia HOM05D004661 ORTHO05D005827 1.1e-08 64.7 54 64.8
SEGI_03893 Sequoiadendron giganteum HOM05D004661 ORTHO05D005827 2.2e-07 60.5 100 41.0
Cre10.g425050 Chlamydomonas reinhardtii HOM05D004661 ORTHO05D005827 8.2e-07 58.5 238 26.9
MBI04_g06620_MAGBIO Magnolia biondii HOM05D004661 ORTHO05D005827 1.1e-06 58.2 52 57.7
MBI06_g18796_MAGBIO Magnolia biondii HOM05D004661 ORTHO05D005827 1.1e-06 58.2 52 57.7
MBI11_g17728_MAGBIO Magnolia biondii HOM05D004661 ORTHO05D005827 1.1e-06 58.2 157 36.3


User provided reference genes

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