Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CBR_g74641 Chara braunii HOM05D004363 ORTHO05D005110 0.0e+00 2196.8 1142 100.0
SEGI_03324 Sequoiadendron giganteum HOM05D004363 ORTHO05D005110 8.8e-88 329.7 719 32.4
Pp3c6_8810 Physcomitrium patens HOM05D004363 ORTHO05D005110 3.7e-86 324.3 718 34.4
Mapoly0053s0062 Marchantia polymorpha HOM05D004363 ORTHO05D005110 4.1e-85 320.9 801 32.3
AagrBONN_evm.TU.Sc2ySwM_228.1566 Anthoceros agrestis HOM05D004363 ORTHO05D005110 4.1e-69 267.7 549 35.0
TAR169G0003 Trochodendron aralioides HOM05D004363 ORTHO05D005110 1.4e-64 252.7 740 28.4
TAR628G0010 Trochodendron aralioides HOM05D004363 ORTHO05D005110 1.5e-63 249.2 736 27.7
THA.LOC104820934 Tarenaya hassleriana HOM05D004363 ORTHO05D005110 3.2e-61 241.5 721 27.9
TAR623G0254 Trochodendron aralioides HOM05D004363 ORTHO05D005110 2.0e-60 238.8 694 28.2
Gohir.D04G092000 Gossypium hirsutum HOM05D004363 ORTHO05D005110 3.5e-60 238.0 710 28.6
AT5G16280 Arabidopsis thaliana HOM05D004363 ORTHO05D005110 4.5e-60 237.7 722 27.8
MD14G1040700 Malus domestica HOM05D004363 ORTHO05D005110 4.5e-60 237.7 727 27.6
GSVIVG01022591001 Vitis vinifera HOM05D004363 ORTHO05D005110 4.5e-60 237.7 716 28.4
MD12G1041600 Malus domestica HOM05D004363 ORTHO05D005110 7.8e-60 236.9 727 28.1
ATR0772G191 Amborella trichopoda HOM05D004363 ORTHO05D005110 1.7e-59 235.7 737 29.3
Dinv31774 Davidia involucrata HOM05D004363 ORTHO05D005110 1.7e-59 235.7 737 27.8
TWI74G0412 Tripterygium wilfordii HOM05D004363 ORTHO05D005110 8.6e-59 233.4 695 28.1
BraA10t44344Z Brassica rapa HOM05D004363 ORTHO05D005110 1.1e-58 233.0 720 27.1
COL.COLO4_29546 Corchorus olitorius HOM05D004363 ORTHO05D005110 1.5e-58 232.6 709 26.9
Duzib093G0100 Durio zibethinus HOM05D004363 ORTHO05D005110 1.5e-58 232.6 709 27.4
Sp6g27880 Schrenkiella parvula HOM05D004363 ORTHO05D005110 4.3e-58 231.1 747 27.6
Atru.chr8.1332 Acer truncatum HOM05D004363 ORTHO05D005110 7.3e-58 230.3 725 26.6
TWI77G0878 Tripterygium wilfordii HOM05D004363 ORTHO05D005110 7.3e-58 230.3 708 26.7
CiPaw.10G018600 Carya illinoinensis HOM05D004363 ORTHO05D005110 9.5e-58 229.9 724 28.3
Thecc.05G106200 Theobroma cacao HOM05D004363 ORTHO05D005110 9.5e-58 229.9 734 26.7
A10p22780 Brassica napus HOM05D004363 ORTHO05D005110 1.6e-57 229.2 720 26.9
MSTRG.5891 Avicennia marina HOM05D004363 ORTHO05D005110 2.1e-57 228.8 732 27.6
AL6G27170 Arabidopsis lyrata HOM05D004363 ORTHO05D005110 2.8e-57 228.4 724 27.2
Carub.0006s1447 Capsella rubella HOM05D004363 ORTHO05D005110 6.1e-57 227.3 721 27.2
FAN05G3395 Fragaria x ananassa HOM05D004363 ORTHO05D005110 8.0e-57 226.9 711 27.4
FvH4_6g20450 Fragaria vesca HOM05D004363 ORTHO05D005110 1.0e-56 226.5 710 27.0
Aqoxy1G00638 Aquilegia oxysepala HOM05D004363 ORTHO05D005110 1.4e-56 226.1 713 27.6
BolC9t58910H Brassica oleracea HOM05D004363 ORTHO05D005110 1.4e-56 226.1 722 26.9
Gohir.A11G315700 Gossypium hirsutum HOM05D004363 ORTHO05D005110 2.3e-56 225.3 733 26.3
EL10Ac5g11738 Beta vulgaris HOM05D004363 ORTHO05D005110 3.1e-56 224.9 720 27.4
Gorai.009G393900 Gossypium raimondii HOM05D004363 ORTHO05D005110 3.1e-56 224.9 718 27.9
Aa31LG11G13340 Aethionema arabicum HOM05D004363 ORTHO05D005110 5.2e-56 224.2 723 27.2
Eucgr.A02575 Eucalyptus grandis HOM05D004363 ORTHO05D005110 5.2e-56 224.2 717 27.5
Manes.08G034300 Manihot esculenta HOM05D004363 ORTHO05D005110 5.2e-56 224.2 710 27.2
Prupe.7G093600 Prunus persica HOM05D004363 ORTHO05D005110 8.9e-56 223.4 713 27.1
Ciclev10010925m.g Citrus clementina HOM05D004363 ORTHO05D005110 1.5e-55 222.6 715 28.1
FAN14G2782 Fragaria x ananassa HOM05D004363 ORTHO05D005110 3.4e-55 221.5 713 26.9
Migut.J00693 Erythranthe guttata HOM05D004363 ORTHO05D005110 4.4e-55 221.1 710 28.2
Nn6g34649 Nelumbo nucifera HOM05D004363 ORTHO05D005110 4.4e-55 221.1 715 27.6
PGR004G0690 Punica granatum HOM05D004363 ORTHO05D005110 5.8e-55 220.7 730 26.4
Oeu035643.1 Olea europaea HOM05D004363 ORTHO05D005110 7.5e-55 220.3 730 26.7
Psat0s3922g0040 Pisum sativum HOM05D004363 ORTHO05D005110 7.5e-55 220.3 717 27.1
Gorai.007G363900 Gossypium raimondii HOM05D004363 ORTHO05D005110 1.3e-54 219.5 733 27.0
FAN05G1872 Fragaria x ananassa HOM05D004363 ORTHO05D005110 1.7e-54 219.2 715 27.7
Phvul.001G196200 Phaseolus vulgaris HOM05D004363 ORTHO05D005110 2.2e-54 218.8 718 26.7
Thhalv10012466m.g Eutrema salsugineum HOM05D004363 ORTHO05D005110 3.7e-54 218.0 727 27.1
Gohir.D11G332900 Gossypium hirsutum HOM05D004363 ORTHO05D005110 6.4e-54 217.2 733 26.5
PSO339G1158 Papaver somniferum HOM05D004363 ORTHO05D005110 8.3e-54 216.9 717 26.5
Sed0002127 Sechium edule HOM05D004363 ORTHO05D005110 1.4e-53 216.1 711 25.9
MSTRG.19302 Avicennia marina HOM05D004363 ORTHO05D005110 1.9e-53 215.7 719 26.6
CsaV3_3G038050 Cucumis sativus L. HOM05D004363 ORTHO05D005110 1.9e-53 215.7 707 26.6
Glyma.03G202700 Glycine max HOM05D004363 ORTHO05D005110 2.4e-53 215.3 735 26.8
Ca_09062_v3 Cicer arietinum L. HOM05D004363 ORTHO05D005110 4.1e-53 214.5 725 27.3
DCAR_020694 Daucus carota HOM05D004363 ORTHO05D005110 4.1e-53 214.5 777 25.9
Glyma.19G200400 Glycine max HOM05D004363 ORTHO05D005110 9.2e-53 213.4 735 26.0
Medtr7g106380 Medicago truncatula HOM05D004363 ORTHO05D005110 1.2e-52 213.0 737 26.2
BolC3t13384H Brassica oleracea HOM05D004363 ORTHO05D005110 2.0e-52 212.2 746 25.7
A03p07650 Brassica napus HOM05D004363 ORTHO05D005110 2.7e-52 211.8 746 25.5
BraA03t10093Z Brassica rapa HOM05D004363 ORTHO05D005110 2.7e-52 211.8 746 25.5
Lj1g0000064 Lotus japonicus HOM05D004363 ORTHO05D005110 3.5e-52 211.5 709 26.1
CSS0038425 Camellia sinensis var. sinensis HOM05D004363 ORTHO05D005110 4.6e-52 211.1 706 26.8
Duzib128G0297 Durio zibethinus HOM05D004363 ORTHO05D005110 6.0e-52 210.7 715 26.3
VMungo1383G2497 Vigna mungo HOM05D004363 ORTHO05D005110 6.0e-52 210.7 717 25.8
AUR62041186 Chenopodium quinoa HOM05D004363 ORTHO05D005110 1.0e-51 209.9 749 26.0
PSO384G4461 Papaver somniferum HOM05D004363 ORTHO05D005110 1.0e-51 209.9 717 26.4
Potri.016G068800 Populus trichocarpa HOM05D004363 ORTHO05D005110 1.0e-51 209.9 714 27.6
C03p08890 Brassica napus HOM05D004363 ORTHO05D005110 1.3e-51 209.5 746 25.9
CANSAT64G2344 Cannabis sativa HOM05D004363 ORTHO05D005110 1.3e-51 209.5 725 25.8
ClCG10G018260 Citrullus lanatus HOM05D004363 ORTHO05D005110 3.0e-51 208.4 724 26.1
FAN09G2042 Fragaria x ananassa HOM05D004363 ORTHO05D005110 5.0e-51 207.6 721 26.9
TPR.G31289 Trifolium pratense HOM05D004363 ORTHO05D005110 8.6e-51 206.8 734 25.7
Gohir.A04G054800 Gossypium hirsutum HOM05D004363 ORTHO05D005110 1.2e-49 203.0 583 28.3
Hund10860 Selenicereus undatus HOM05D004363 ORTHO05D005110 2.1e-49 202.2 750 26.0
Zm00001eb060010 Zea mays HOM05D004363 ORTHO05D005110 2.8e-49 201.8 694 25.8
Sabra16G0069700 Salix brachista HOM05D004363 ORTHO05D005110 6.2e-49 200.7 728 26.5
arahy.Tifrunner.gnm1.ann1.KT4HPP Arachis hypogaea HOM05D004363 ORTHO05D005110 1.8e-48 199.1 735 25.7
HPP92_013952 Vanilla planifolia HOM05D004363 ORTHO05D005110 2.3e-48 198.7 718 26.7
arahy.Tifrunner.gnm1.ann1.D60SL5 Arachis hypogaea HOM05D004363 ORTHO05D005110 5.2e-48 197.6 735 25.7
Sopen01g002950 Solanum pennellii HOM05D004363 ORTHO05D005110 5.2e-48 197.6 756 25.0
SGA_v2.0_scaffold13G06653 Striga asiatica HOM05D004363 ORTHO05D005110 1.2e-47 196.4 708 25.8
Cfa020046 Carpinus fangiana HOM05D004363 ORTHO05D005110 2.0e-47 195.7 704 26.3
Solyc01g006960.3 Solanum lycopersicum HOM05D004363 ORTHO05D005110 2.0e-47 195.7 757 25.5
HanXRQChr02g0053261 Helianthus annuus HOM05D004363 ORTHO05D005110 2.6e-47 195.3 727 26.3
Lalb_Chr01g0017831 Lupinus albus HOM05D004363 ORTHO05D005110 5.8e-47 194.1 713 25.4
Nitab4.5_0001191g0010 Nicotiana tabacum HOM05D004363 ORTHO05D005110 5.8e-47 194.1 781 26.9
ECA233G0072 Erigeron canadensis HOM05D004363 ORTHO05D005110 7.5e-47 193.7 729 26.5
Nitab4.5_0001177g0040 Nicotiana tabacum HOM05D004363 ORTHO05D005110 1.7e-46 192.6 745 26.6
Os03g0786900 Oryza sativa ssp. japonica HOM05D004363 ORTHO05D005110 1.4e-45 189.5 700 25.3
Sc01g0005470 Simmondsia chinensis HOM05D004363 ORTHO05D005110 1.4e-45 189.5 714 26.6
CAN.G911.40 Capsicum annuum HOM05D004363 ORTHO05D005110 1.2e-44 186.4 711 26.2
CDE11G0453 Ceratophyllum demersum HOM05D004363 ORTHO05D005110 1.6e-44 186.0 731 24.6
Peaxi162Scf00582g00064 Petunia axillaris HOM05D004363 ORTHO05D005110 3.9e-43 181.4 710 25.5
MELO3C009547.2 Cucumis melo HOM05D004363 ORTHO05D005110 8.6e-43 180.3 747 24.4
vmacro07483 Vaccinium macrocarpon HOM05D004363 ORTHO05D005110 1.1e-40 173.3 707 25.3
Cpa.g.sc104.13 Carica papaya HOM05D004363 ORTHO05D005110 1.4e-40 172.9 600 26.8
QL07p036386 Quercus lobata HOM05D004363 ORTHO05D005110 8.9e-40 170.2 302 35.1
Dinv12347 Davidia involucrata HOM05D004363 ORTHO05D005110 9.9e-39 166.8 301 34.2
BcaB01g04994 Brassica carinata HOM05D004363 ORTHO05D005110 2.2e-38 165.6 283 33.9
SMO196G0050 Selaginella moellendorffii HOM05D004363 ORTHO05D005110 4.9e-38 164.5 274 38.3
Lsat_1_v5_gn_6_33820 Lactuca sativa HOM05D004363 ORTHO05D005110 6.4e-38 164.1 727 24.1
BcaNung06113 Brassica carinata HOM05D004363 ORTHO05D005110 1.1e-37 163.3 301 33.9
unitig_578.g15812 Utricularia gibba HOM05D004363 ORTHO05D005110 1.9e-37 162.5 694 25.1
RcHm_v2.0_Chr3g0476301 Rosa chinensis HOM05D004363 ORTHO05D005110 9.2e-37 160.2 338 31.4
FAN02G1528 Fragaria x ananassa HOM05D004363 ORTHO05D005110 2.1e-36 159.1 477 27.9
AUR62030686 Chenopodium quinoa HOM05D004363 ORTHO05D005110 2.7e-36 158.7 746 24.9
Ah.07g203620 Amaranthus hybridus HOM05D004363 ORTHO05D005110 1.1e-34 153.3 328 30.2
Rhsim11G0045000 Rhododendron simsii HOM05D004363 ORTHO05D005110 1.4e-32 146.4 310 31.9
Cc06_g06670 Coffea canephora HOM05D004363 ORTHO05D005110 4.0e-32 144.8 302 31.5
Actinidia03876 Actinidia chinensis HOM05D004363 ORTHO05D005110 1.2e-31 143.3 277 33.2
Actinidia03984 Actinidia chinensis HOM05D004363 ORTHO05D005110 4.4e-31 141.4 265 33.2
SEGI_22432 Sequoiadendron giganteum HOM05D004363 ORTHO05D005110 7.6e-31 140.6 230 36.1
Lalb_Chr25g0287961 Lupinus albus HOM05D004363 ORTHO05D005110 3.5e-28 131.7 731 22.7
Nn3g20229 Nelumbo nucifera HOM05D004363 ORTHO05D005110 1.3e-27 129.8 188 36.2
Cre01.g024400 Chlamydomonas reinhardtii HOM05D004363 ORTHO05D005110 2.0e-23 115.9 520 26.2
PRCOL_00001893 Prasinoderma coloniale HOM05D004363 ORTHO05D005110 7.3e-18 97.4 336 27.4
Hma1.2p1_0064F.1_g034600 Hydrangea macrophylla HOM05D004363 ORTHO05D005110 1.3e-17 96.7 257 28.8
Ah.07g203610 Amaranthus hybridus HOM05D004363 ORTHO05D005110 7.9e-12 77.4 235 28.5
MCO09G191 Micromonas commoda HOM05D004363 ORTHO05D005110 9.6e-10 70.5 291 28.2


User provided reference genes

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