Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CBR_g6294 Chara braunii HOM05D001879 ORTHO05D007648 0.0e+00 4832.3 3003 100.0
SEGI_08589 Sequoiadendron giganteum HOM05D001879 ORTHO05D007648 5.1e-34 152.5 1246 21.9
AagrBONN_evm.TU.Sc2ySwM_117.1790 Anthoceros agrestis HOM05D001879 ORTHO05D007648 3.3e-33 149.8 303 35.0
Pp3c24_10810 Physcomitrium patens HOM05D001879 ORTHO05D007648 1.2e-32 147.9 1305 22.5
Mapoly0006s0231 Marchantia polymorpha HOM05D001879 ORTHO05D007648 6.2e-32 145.6 301 34.2
CBR_g6612 Chara braunii HOM05D001879 ORTHO05D007648 3.4e-30 139.8 1273 23.7
SMO143G0029 Selaginella moellendorffii HOM05D001879 ORTHO05D007648 1.6e-27 131.0 385 27.3
Zm00001eb152180 Zea mays HOM05D001879 ORTHO05D007648 2.1e-16 94.0 503 25.8
Nn5g30557 Nelumbo nucifera HOM05D001879 ORTHO05D007648 4.8e-16 92.8 180 36.1
Os01g0765300 Oryza sativa ssp. japonica HOM05D001879 ORTHO05D007648 4.8e-16 92.8 294 27.6
arahy.Tifrunner.gnm1.ann1.0QZG7W Arachis hypogaea HOM05D001879 ORTHO05D007648 5.3e-15 89.4 165 29.1
Rhsim07G0220800 Rhododendron simsii HOM05D001879 ORTHO05D007648 5.3e-15 89.4 129 34.9
arahy.Tifrunner.gnm1.ann1.6NC3R4 Arachis hypogaea HOM05D001879 ORTHO05D007648 1.5e-14 87.8 165 29.1
Cfa013681 Carpinus fangiana HOM05D001879 ORTHO05D007648 1.5e-14 87.8 165 28.5
GSVIVG01009356001 Vitis vinifera HOM05D001879 ORTHO05D007648 1.5e-14 87.8 175 37.7
ATR0208G021 Amborella trichopoda HOM05D001879 ORTHO05D007648 2.0e-14 87.4 279 29.0
MD08G1086000 Malus domestica HOM05D001879 ORTHO05D007648 2.0e-14 87.4 171 28.1
QL12p037902 Quercus lobata HOM05D001879 ORTHO05D007648 3.4e-14 86.7 158 29.1
PSO017G6116 Papaver somniferum HOM05D001879 ORTHO05D007648 7.6e-14 85.5 186 37.1
TAR633G2582 Trochodendron aralioides HOM05D001879 ORTHO05D007648 7.6e-14 85.5 176 36.4
AUR62038814 Chenopodium quinoa HOM05D001879 ORTHO05D007648 9.9e-14 85.1 173 38.7
TWI56G1003 Tripterygium wilfordii HOM05D001879 ORTHO05D007648 9.9e-14 85.1 297 24.2
Potri.014G017000 Populus trichocarpa HOM05D001879 ORTHO05D007648 1.3e-13 84.7 158 30.4
Actinidia10192 Actinidia chinensis HOM05D001879 ORTHO05D007648 1.7e-13 84.3 166 31.3
CsaV3_4G034990 Cucumis sativus L. HOM05D001879 ORTHO05D007648 2.9e-13 83.6 165 30.3
Ah.05g167110 Amaranthus hybridus HOM05D001879 ORTHO05D007957 3.8e-13 83.2 176 38.1
Cpa.g.sc142.15 Carica papaya HOM05D001879 ORTHO05D007648 4.9e-13 82.8 165 26.1
Sabra14G0010800 Salix brachista HOM05D001879 ORTHO05D007648 4.9e-13 82.8 122 35.2
CANSAT25G1585 Cannabis sativa HOM05D001879 ORTHO05D007648 8.4e-13 82.0 309 21.0
AUR62037434 Chenopodium quinoa HOM05D001879 ORTHO05D007648 8.4e-13 82.0 173 38.2
ClCG05G020550 Citrullus lanatus HOM05D001879 ORTHO05D007648 8.4e-13 82.0 305 24.3
MELO3C016811.2 Cucumis melo HOM05D001879 ORTHO05D007648 8.4e-13 82.0 165 30.3
Dinv44962 Davidia involucrata HOM05D001879 ORTHO05D007648 8.4e-13 82.0 122 33.6
Lalb_Chr22g0355581 Lupinus albus HOM05D001879 ORTHO05D007648 8.4e-13 82.0 165 27.9
Psat6g016280 Pisum sativum HOM05D001879 ORTHO05D007648 8.4e-13 82.0 143 30.8
RcHm_v2.0_Chr6g0309441 Rosa chinensis HOM05D001879 ORTHO05D007648 1.1e-12 81.6 171 25.7
Os01g0765200 Oryza sativa ssp. japonica HOM05D001879 ORTHO05D007648 1.4e-12 81.3 159 31.4
PGR031G1956 Punica granatum HOM05D001879 ORTHO05D007957 1.4e-12 81.3 484 19.4
Cc10_g05690 Coffea canephora HOM05D001879 ORTHO05D007648 1.9e-12 80.9 408 23.0
Sc15g0005720 Simmondsia chinensis HOM05D001879 ORTHO05D007648 1.9e-12 80.9 186 33.9
HPP92_019611 Vanilla planifolia HOM05D001879 ORTHO05D007648 1.9e-12 80.9 165 27.9
Lj4A759T48 Lonicera japonica HOM05D001879 ORTHO05D007648 2.4e-12 80.5 176 34.1
Nitab4.5_0000164g0150 Nicotiana tabacum HOM05D001879 ORTHO05D007648 2.4e-12 80.5 129 32.6
Nitab4.5_0003803g0020 Nicotiana tabacum HOM05D001879 ORTHO05D007648 2.4e-12 80.5 129 32.6
Prupe.1G423900 Prunus persica HOM05D001879 ORTHO05D007648 2.4e-12 80.5 165 26.1
Lj5g0015061 Lotus japonicus HOM05D001879 ORTHO05D007648 3.2e-12 80.1 165 27.3
Sed0027780 Sechium edule HOM05D001879 ORTHO05D007648 3.2e-12 80.1 307 21.2
Solyc04g077940.4 Solanum lycopersicum HOM05D001879 ORTHO05D007648 3.2e-12 80.1 176 31.2
CSS0015613 Camellia sinensis var. sinensis HOM05D001879 ORTHO05D007648 4.2e-12 79.7 165 27.3
EL10Ac1g02391 Beta vulgaris HOM05D001879 ORTHO05D007648 5.4e-12 79.3 176 36.4
Glyma.17G235900 Glycine max HOM05D001879 ORTHO05D007648 5.4e-12 79.3 129 31.8
ECA247G3074 Erigeron canadensis HOM05D001879 ORTHO05D007648 7.1e-12 79.0 166 27.7
FvH4_2g33220 Fragaria vesca HOM05D001879 ORTHO05D007648 7.1e-12 79.0 165 25.5
FAN24G0874 Fragaria x ananassa HOM05D001879 ORTHO05D007648 7.1e-12 79.0 165 25.5
Sopen04g031540 Solanum pennellii HOM05D001879 ORTHO05D007648 7.1e-12 79.0 176 30.7
Thecc.08G090000 Theobroma cacao HOM05D001879 ORTHO05D007648 1.2e-11 78.2 161 29.2
CDE06G0223 Ceratophyllum demersum HOM05D001879 ORTHO05D007648 1.6e-11 77.8 122 32.8
Gohir.D05G212700 Gossypium hirsutum HOM05D001879 ORTHO05D007648 1.6e-11 77.8 170 27.1
Peaxi162Scf00081g01617 Petunia axillaris HOM05D001879 ORTHO05D007648 1.6e-11 77.8 176 34.7
Glyma.14G088600 Glycine max HOM05D001879 ORTHO05D007648 2.1e-11 77.4 165 26.7
Manes.05G181200 Manihot esculenta HOM05D001879 ORTHO05D007648 2.7e-11 77.0 178 35.4
VMungo0647G0280 Vigna mungo HOM05D001879 ORTHO05D007648 2.7e-11 77.0 165 25.5
Gohir.A05G209500 Gossypium hirsutum HOM05D001879 ORTHO05D007648 3.5e-11 76.6 163 29.4
Lsat_1_v5_gn_1_24340 Lactuca sativa HOM05D001879 ORTHO05D007648 3.5e-11 76.6 165 24.8
MSTRG.1026 Avicennia marina HOM05D001879 ORTHO05D007648 4.6e-11 76.3 165 26.7
CiPaw.07G175900 Carya illinoinensis HOM05D001879 ORTHO05D007648 4.6e-11 76.3 176 35.2
Gorai.009G219200 Gossypium raimondii HOM05D001879 ORTHO05D007648 4.6e-11 76.3 161 28.0
Medtr1g018350 Medicago truncatula HOM05D001879 ORTHO05D007648 4.6e-11 76.3 165 26.1
HanXRQChr08g0220641 Helianthus annuus HOM05D001879 ORTHO05D007648 6.0e-11 75.9 178 33.7
TPR.G3779 Trifolium pratense HOM05D001879 ORTHO05D007648 6.0e-11 75.9 165 26.1
Atru.chr13.820 Acer truncatum HOM05D001879 ORTHO05D007648 7.9e-11 75.5 158 32.3
Aqoxy5G00884 Aquilegia oxysepala HOM05D001879 ORTHO05D007648 7.9e-11 75.5 205 31.7
DCAR_008854 Daucus carota HOM05D001879 ORTHO05D007648 7.9e-11 75.5 176 34.7
SHI08393 Sapria himalayana HOM05D001879 ORTHO05D007648 7.9e-11 75.5 129 31.0
Ciclev10003334m.g Citrus clementina HOM05D001879 ORTHO05D007648 1.0e-10 75.1 165 27.3
A09p38350 Brassica napus HOM05D001879 ORTHO05D007648 1.3e-10 74.7 133 32.3
FAN20G0949 Fragaria x ananassa HOM05D001879 ORTHO05D007648 1.3e-10 74.7 129 30.2
Phvul.001G026900 Phaseolus vulgaris HOM05D001879 ORTHO05D007648 3.0e-10 73.6 129 28.7
SalBow7G0276 Salvia bowleyana HOM05D001879 ORTHO05D007648 3.9e-10 73.2 137 32.8
AL1G41280 Arabidopsis lyrata HOM05D001879 ORTHO05D007648 5.1e-10 72.8 126 32.5
BcaC05g26775 Brassica carinata HOM05D001879 ORTHO05D007648 5.1e-10 72.8 126 32.5
Ca_13228_v3 Cicer arietinum L. HOM05D001879 ORTHO05D007648 5.1e-10 72.8 165 26.1
Thhalv10006638m.g Eutrema salsugineum HOM05D001879 ORTHO05D007648 5.1e-10 72.8 133 30.8
TAR381G0870 Trochodendron aralioides HOM05D001879 ORTHO05D007648 5.1e-10 72.8 129 31.0
Lalb_Chr24g0399421 Lupinus albus HOM05D001879 ORTHO05D007648 6.7e-10 72.4 165 24.8
SGA_v2.0_scaffold238G43965 Striga asiatica HOM05D001879 ORTHO05D007648 6.7e-10 72.4 202 31.2
Sp1g23980 Schrenkiella parvula HOM05D001879 ORTHO05D007648 1.1e-09 71.6 210 31.4
BraA09t39344Z Brassica rapa HOM05D001879 ORTHO05D007648 1.5e-09 71.2 133 30.8
FAN27G0954 Fragaria x ananassa HOM05D001879 ORTHO05D007648 1.5e-09 71.2 171 24.6
AT1G27750 Arabidopsis thaliana HOM05D001879 ORTHO05D007648 1.9e-09 70.9 210 31.0
COL.COLO4_28516 Corchorus olitorius HOM05D001879 ORTHO05D007957 1.9e-09 70.9 172 35.5
Ca_14462_v3 Cicer arietinum L. HOM05D001879 ORTHO05D000002 3.3e-09 70.1 165 25.5
FAN15G3244 Fragaria x ananassa HOM05D001879 ORTHO05D007648 3.3e-09 70.1 179 24.0
C05p26440 Brassica napus HOM05D001879 ORTHO05D007648 5.6e-09 69.3 133 30.8
BolC5t31365H Brassica oleracea HOM05D001879 ORTHO05D007648 5.6e-09 69.3 133 30.8
Carub.0001s2626 Capsella rubella HOM05D001879 ORTHO05D007648 9.6e-09 68.6 126 30.2
Haze_22324 Corylus avellana HOM05D001879 ORTHO05D007648 9.6e-09 68.6 176 34.7
Eucgr.F02258 Eucalyptus grandis HOM05D001879 ORTHO05D007648 9.6e-09 68.6 176 33.5
Aa31sc113G20 Aethionema arabicum HOM05D001879 ORTHO05D007648 3.7e-08 66.6 216 31.9
CARHR027260 Cardamine hirsuta HOM05D001879 ORTHO05D007648 6.2e-08 65.9 210 30.0
Hund24034 Selenicereus undatus HOM05D001879 ORTHO05D007648 1.4e-07 64.7 193 33.2
Pp3c11_21890 Physcomitrium patens HOM05D002300 ORTHO05D002340 1.8e-07 64.3 299 21.7
Oeu022102.3 Olea europaea HOM05D001879 ORTHO05D007648 6.9e-07 62.4 173 28.9


User provided reference genes

Program Settings