Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CBR_g60689 Chara braunii HOM05D006330 ORTHO05D008013 2.8e-275 951.4 517 100.0
Pp3c24_1560 Physcomitrium patens HOM05D006330 ORTHO05D008013 1.2e-95 354.8 300 61.7
ECA247G1307 Erigeron canadensis HOM05D006330 ORTHO05D008013 3.1e-93 346.7 260 68.5
Sopen09g015980 Solanum pennellii HOM05D006330 ORTHO05D008013 1.6e-92 344.4 249 70.3
ATR0743G141 Amborella trichopoda HOM05D006330 ORTHO05D008013 8.6e-91 338.6 242 70.7
Lj2C1112G6 Lonicera japonica HOM05D006330 ORTHO05D008013 3.3e-90 336.7 268 65.7
GSVIVG01001532001 Vitis vinifera HOM05D006330 ORTHO05D008013 4.3e-90 336.3 270 64.4
Os11g0247400 Oryza sativa ssp. japonica HOM05D006330 ORTHO05D008013 5.6e-90 335.9 252 68.3
Glyma.03G097100 Glycine max HOM05D006330 ORTHO05D008013 7.3e-90 335.5 237 70.0
RcHm_v2.0_Chr6g0282221 Rosa chinensis HOM05D006330 ORTHO05D008013 9.5e-90 335.1 253 66.0
ClCG09G008360 Citrullus lanatus HOM05D006330 ORTHO05D008013 1.2e-89 334.7 237 71.7
DCAR_004774 Daucus carota HOM05D006330 ORTHO05D008013 1.2e-89 334.7 240 68.8
PGR044G2230 Punica granatum HOM05D006330 ORTHO05D008013 1.2e-89 334.7 273 62.3
Zm00001eb168340 Zea mays HOM05D006330 ORTHO05D008013 1.2e-89 334.7 263 66.2
VMungo0331G1131 Vigna mungo HOM05D006330 ORTHO05D008013 1.6e-89 334.3 238 69.7
HanXRQChr07g0190561 Helianthus annuus HOM05D006330 ORTHO05D008013 2.1e-89 334.0 252 67.1
Potri.014G175500 Populus trichocarpa HOM05D006330 ORTHO05D008013 2.1e-89 334.0 253 66.8
CARHR101770 Cardamine hirsuta HOM05D006330 ORTHO05D008013 2.8e-89 333.6 242 69.0
CDE02G1604 Ceratophyllum demersum HOM05D006330 ORTHO05D008013 2.8e-89 333.6 246 68.3
Haze_03505 Corylus avellana HOM05D006330 ORTHO05D008013 2.8e-89 333.6 251 68.1
Phvul.010G036400 Phaseolus vulgaris HOM05D006330 ORTHO05D008013 2.8e-89 333.6 238 69.3
MELO3C021126.2 Cucumis melo HOM05D006330 ORTHO05D008013 3.6e-89 333.2 237 71.3
CsaV3_7G026730 Cucumis sativus L. HOM05D006330 ORTHO05D008013 3.6e-89 333.2 237 71.3
Sp3g22990 Schrenkiella parvula HOM05D006330 ORTHO05D008013 3.6e-89 333.2 242 68.6
Carub.0003s2579 Capsella rubella HOM05D006330 ORTHO05D008013 4.7e-89 332.8 242 69.4
Migut.D00775 Erythranthe guttata HOM05D006330 ORTHO05D008013 4.7e-89 332.8 243 68.3
Thhalv10002617m.g Eutrema salsugineum HOM05D006330 ORTHO05D008013 4.7e-89 332.8 242 69.0
Nn7g37444 Nelumbo nucifera HOM05D006330 ORTHO05D008013 4.7e-89 332.8 247 70.0
Cc01_g15880 Coffea canephora HOM05D006330 ORTHO05D008013 6.1e-89 332.4 247 68.8
FvH4_2g17480 Fragaria vesca HOM05D006330 ORTHO05D008013 6.1e-89 332.4 249 67.1
FAN15G1514 Fragaria x ananassa HOM05D006330 ORTHO05D008013 8.0e-89 332.0 249 67.1
Prupe.8G187200 Prunus persica HOM05D006330 ORTHO05D008013 8.0e-89 332.0 251 67.3
Sed0009827 Sechium edule HOM05D006330 ORTHO05D008013 8.0e-89 332.0 241 70.1
Lsat_1_v5_gn_9_16880 Lactuca sativa HOM05D006330 ORTHO05D008013 1.0e-88 331.6 247 68.0
MBI10_g35385_MAGBIO Magnolia biondii HOM05D006330 ORTHO05D008013 1.0e-88 331.6 251 67.3
TWI36G1481 Tripterygium wilfordii HOM05D006330 ORTHO05D008013 1.0e-88 331.6 244 68.9
Manes.12G055500 Manihot esculenta HOM05D006330 ORTHO05D008013 1.4e-88 331.3 247 67.2
Psat4g208240 Pisum sativum HOM05D006330 ORTHO05D008013 1.4e-88 331.3 265 63.8
AL3G41590 Arabidopsis lyrata HOM05D006330 ORTHO05D008013 1.8e-88 330.9 242 69.4
BcaB08g34453 Brassica carinata HOM05D006330 ORTHO05D008013 1.8e-88 330.9 242 69.0
Lalb_Chr12g0210221 Lupinus albus HOM05D006330 ORTHO05D008013 1.8e-88 330.9 287 61.0
Atru.chr6.3528 Acer truncatum HOM05D006330 ORTHO05D008013 2.3e-88 330.5 247 68.8
Mapoly0006s0124 Marchantia polymorpha HOM05D006330 ORTHO05D008013 2.3e-88 330.5 256 64.5
AT3G25470 Arabidopsis thaliana HOM05D006330 ORTHO05D008013 3.0e-88 330.1 242 69.0
Ciclev10015989m.g Citrus clementina HOM05D006330 ORTHO05D008013 5.2e-88 329.3 247 68.4
Gohir.D11G150300 Gossypium hirsutum HOM05D006330 ORTHO05D008013 5.2e-88 329.3 238 69.3
Gorai.007G161200 Gossypium raimondii HOM05D006330 ORTHO05D008013 5.2e-88 329.3 238 69.3
CANSAT01G2136 Cannabis sativa HOM05D006330 ORTHO05D008013 6.8e-88 328.9 254 66.9
Cfa010572 Carpinus fangiana HOM05D006330 ORTHO05D008013 6.8e-88 328.9 251 67.3
THA.LOC104804704 Tarenaya hassleriana HOM05D006330 ORTHO05D008013 6.8e-88 328.9 277 62.1
C03p54570 Brassica napus HOM05D006330 ORTHO05D008013 8.9e-88 328.6 242 68.6
BolC3t17744H Brassica oleracea HOM05D006330 ORTHO05D008013 8.9e-88 328.6 242 68.6
SMO141G0006 Selaginella moellendorffii HOM05D006330 ORTHO05D008013 8.9e-88 328.6 255 66.3
TAR362G0826 Trochodendron aralioides HOM05D006330 ORTHO05D008013 8.9e-88 328.6 250 68.4
BcaC06g35817 Brassica carinata HOM05D006330 ORTHO05D008013 1.2e-87 328.2 242 68.6
A07p06930 Brassica napus HOM05D006330 ORTHO05D008013 1.2e-87 328.2 242 68.6
BraA07t28484Z Brassica rapa HOM05D006330 ORTHO05D008013 1.2e-87 328.2 242 68.6
A03p44190 Brassica napus HOM05D006330 ORTHO05D008013 1.5e-87 327.8 242 68.6
BraA03t13548Z Brassica rapa HOM05D006330 ORTHO05D008013 1.5e-87 327.8 242 68.6
FAN24G2605 Fragaria x ananassa HOM05D006330 ORTHO05D008013 2.0e-87 327.4 249 66.3
TPR.G17377 Trifolium pratense HOM05D006330 ORTHO05D008013 2.6e-87 327.0 252 65.5
Aa31sc18G40 Aethionema arabicum HOM05D006330 ORTHO05D008013 3.4e-87 326.6 245 69.0
MSTRG.21296 Avicennia marina HOM05D006330 ORTHO05D008013 3.4e-87 326.6 254 64.6
Glyma.07G124200 Glycine max HOM05D006330 ORTHO05D008013 3.4e-87 326.6 241 68.9
QL09p047707 Quercus lobata HOM05D006330 ORTHO05D008013 3.4e-87 326.6 249 66.7
Ca_23158_v3 Cicer arietinum L. HOM05D006330 ORTHO05D008013 4.4e-87 326.2 265 63.0
Gohir.A11G143900 Gossypium hirsutum HOM05D006330 ORTHO05D008013 4.4e-87 326.2 245 67.8
Eucgr.K02361 Eucalyptus grandis HOM05D006330 ORTHO05D008013 5.8e-87 325.9 259 64.1
C07p10530 Brassica napus HOM05D006330 ORTHO05D008013 7.5e-87 325.5 243 68.7
MD10G1148200 Malus domestica HOM05D006330 ORTHO05D008013 7.5e-87 325.5 250 66.4
CiPaw.13G055600 Carya illinoinensis HOM05D006330 ORTHO05D008013 1.3e-86 324.7 247 66.4
AUR62008069 Chenopodium quinoa HOM05D006330 ORTHO05D008013 1.3e-86 324.7 240 67.5
EL10Ac5g10587 Beta vulgaris HOM05D006330 ORTHO05D008013 2.9e-86 323.6 247 65.2
BolC7t41520H Brassica oleracea HOM05D006330 ORTHO05D008013 2.9e-86 323.6 243 68.3
Actinidia34530 Actinidia chinensis HOM05D006330 ORTHO05D008013 3.7e-86 323.2 258 64.0
Duzib133G1456 Durio zibethinus HOM05D006330 ORTHO05D008013 4.9e-86 322.8 249 66.3
Thecc.01G207700 Theobroma cacao HOM05D006330 ORTHO05D008013 4.9e-86 322.8 244 67.2
arahy.Tifrunner.gnm1.ann1.3RIK1P Arachis hypogaea HOM05D006330 ORTHO05D008013 6.4e-86 322.4 261 64.4
PSO675G8704 Papaver somniferum HOM05D006330 ORTHO05D008013 6.4e-86 322.4 264 62.9
Sc05g0001630 Simmondsia chinensis HOM05D006330 ORTHO05D008013 6.4e-86 322.4 254 65.4
Medtr8g010130 Medicago truncatula HOM05D006330 ORTHO05D008013 8.3e-86 322.0 252 64.7
SalBow3G0290 Salvia bowleyana HOM05D006330 ORTHO05D008013 8.3e-86 322.0 251 64.5
SGA_v2.0_scaffold231G43447 Striga asiatica HOM05D006330 ORTHO05D008013 8.3e-86 322.0 243 67.1
HPP92_007591 Vanilla planifolia HOM05D006330 ORTHO05D008013 8.3e-86 322.0 237 67.1
Actinidia23802 Actinidia chinensis HOM05D006330 ORTHO05D008013 1.1e-85 321.6 242 66.9
Aqoxy2G02383 Aquilegia oxysepala HOM05D006330 ORTHO05D008013 1.4e-85 321.2 279 59.5
arahy.Tifrunner.gnm1.ann1.84ZR2Z Arachis hypogaea HOM05D006330 ORTHO05D008013 3.2e-85 320.1 261 64.0
Hma1.2p1_0161F.1_g071650 Hydrangea macrophylla HOM05D006330 ORTHO05D008013 2.7e-84 317.0 243 68.3
Rhsim01G0247700 Rhododendron simsii HOM05D006330 ORTHO05D008013 1.0e-83 315.1 237 67.9
vmacro14689 Vaccinium macrocarpon HOM05D006330 ORTHO05D008013 1.9e-82 310.8 251 64.1
SMO186G0001 Selaginella moellendorffii HOM05D006330 ORTHO05D008013 3.3e-82 310.1 246 65.0
Hund09482 Selenicereus undatus HOM05D006330 ORTHO05D008013 8.0e-81 305.4 226 67.7
BcaC01g03225 Brassica carinata HOM05D006330 ORTHO05D008013 5.8e-79 299.3 242 64.5
Ciclev10018050m.g Citrus clementina HOM05D006330 ORTHO05D008013 3.7e-78 296.6 238 64.7
MCO07G099 Micromonas commoda HOM05D006330 ORTHO05D008013 8.3e-78 295.4 238 63.0
Sabra14G0134300 Salix brachista HOM05D006330 ORTHO05D008013 3.5e-76 290.0 254 61.0
AUR62028646 Chenopodium quinoa HOM05D006330 ORTHO05D008013 5.1e-75 286.2 216 66.7
Lj3g0006219 Lotus japonicus HOM05D006330 ORTHO05D008013 9.5e-74 282.0 213 68.5
COL.COLO4_34269 Corchorus olitorius HOM05D006330 ORTHO05D008013 3.6e-73 280.0 212 67.0
Peaxi162Scf00841g00112 Petunia axillaris HOM05D006330 ORTHO05D008013 1.1e-72 278.5 195 74.4
Solyc09g047870.4 Solanum lycopersicum HOM05D006330 ORTHO05D008013 5.2e-72 276.2 194 73.7
Oeu049580.1 Olea europaea HOM05D006330 ORTHO05D008013 1.5e-71 274.6 205 67.8
Nitab4.5_0010469g0010 Nicotiana tabacum HOM05D006330 ORTHO05D008013 2.0e-71 274.2 193 73.6
Nitab4.5_0000038g0340 Nicotiana tabacum HOM05D006330 ORTHO05D008013 4.4e-71 273.1 193 73.1
Dinv28793 Davidia involucrata HOM05D006330 ORTHO05D008013 3.2e-69 266.9 196 70.9
BcaB06g26747 Brassica carinata HOM05D006330 ORTHO05D008013 4.6e-68 263.1 243 58.0
Cre10.g428900 Chlamydomonas reinhardtii HOM05D006330 ORTHO05D008013 3.9e-67 260.0 244 57.8
CSS0004044 Camellia sinensis var. sinensis HOM05D006330 ORTHO05D008013 1.1e-64 251.9 237 57.4
PSO732G0743 Papaver somniferum HOM05D006330 ORTHO05D008013 1.4e-61 241.5 195 65.1
Cpa.g.sc8.41 Carica papaya HOM05D006330 ORTHO05D008013 2.1e-60 237.7 216 58.8
PRCOL_00000451 Prasinoderma coloniale HOM05D006330 ORTHO05D008013 1.0e-59 235.3 310 45.8
HanXRQChr07g0198371 Helianthus annuus HOM05D006330 ORTHO05D008013 5.8e-55 219.5 177 65.0
FAN27G2337 Fragaria x ananassa HOM05D006330 ORTHO05D008013 7.6e-55 219.2 214 57.5
CAN.G253.5 Capsicum annuum HOM05D006330 ORTHO05D008013 1.1e-45 188.7 129 72.9
SEGI_37995 Sequoiadendron giganteum HOM05D006330 ORTHO05D008013 1.0e-43 182.2 115 75.7
AagrBONN_evm.TU.Sc2ySwM_368.2380 Anthoceros agrestis HOM05D006330 ORTHO05D008013 3.7e-41 173.7 114 73.7
arahy.Tifrunner.gnm1.ann1.VBTZ6V Arachis hypogaea HOM05D006330 ORTHO05D008013 6.9e-32 142.9 112 62.5
PSO675G8411 Papaver somniferum HOM05D006330 ORTHO05D008013 8.7e-27 125.9 102 61.8
Cfa009322 Carpinus fangiana HOM05D006614 ORTHO05D008217 1.4e-21 108.6 84 63.1
Hma1.2p1_0161F.1_g071660 Hydrangea macrophylla HOM05D006330 ORTHO05D008013 1.4e-21 108.6 82 62.2
CDE04G0367 Ceratophyllum demersum HOM05D006330 ORTHO05D008013 3.7e-17 94.0 88 53.4
BcaB06g26875 Brassica carinata HOM05D006330 ORTHO05D008013 1.6e-12 78.6 64 64.1


User provided reference genes

Program Settings