Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CBR_g57065 Chara braunii HOM05D004017 ORTHO05D004612 4.9e-174 614.4 311 100.0
Sed0025898 Sechium edule HOM05D004017 ORTHO05D004612 3.0e-22 110.2 170 40.0
FvH4_1g10270 Fragaria vesca HOM05D004017 ORTHO05D004612 8.7e-22 108.6 182 38.5
FAN26G0543 Fragaria x ananassa HOM05D004017 ORTHO05D004612 1.1e-21 108.2 182 37.9
RcHm_v2.0_Chr2g0097091 Rosa chinensis HOM05D004017 ORTHO05D004612 1.5e-21 107.8 181 38.7
FAN19G1215 Fragaria x ananassa HOM05D004017 ORTHO05D004612 1.9e-21 107.5 188 37.2
Glyma.01G158400 Glycine max HOM05D004017 ORTHO05D004612 2.5e-21 107.1 179 39.1
FAN23G1226 Fragaria x ananassa HOM05D004017 ORTHO05D004612 7.3e-21 105.5 193 36.3
FAN28G2227 Fragaria x ananassa HOM05D004017 ORTHO05D004612 7.3e-21 105.5 181 38.1
Nn6g31689 Nelumbo nucifera HOM05D004017 ORTHO05D004612 9.6e-21 105.1 170 40.6
MELO3C013715.2 Cucumis melo HOM05D004017 ORTHO05D004612 3.6e-20 103.2 168 38.1
Hma1.2p1_0300F.1_g117960 Hydrangea macrophylla HOM05D004017 ORTHO05D004612 3.6e-20 103.2 173 39.3
Pp3c13_10410 Physcomitrium patens HOM05D004017 ORTHO05D004612 4.8e-20 102.8 177 38.4
Mapoly0006s0222 Marchantia polymorpha HOM05D004017 ORTHO05D004612 6.2e-20 102.4 174 37.9
Actinidia22894 Actinidia chinensis HOM05D004017 ORTHO05D004612 2.4e-19 100.5 178 37.6
PSO541G0703 Papaver somniferum HOM05D004017 ORTHO05D004612 2.4e-19 100.5 176 38.1
Prupe.7G183500 Prunus persica HOM05D004017 ORTHO05D004612 2.4e-19 100.5 180 38.3
COL.COLO4_22554 Corchorus olitorius HOM05D004017 ORTHO05D004612 3.1e-19 100.1 177 39.0
Atru.chr3.129 Acer truncatum HOM05D004017 ORTHO05D004612 4.0e-19 99.8 178 36.5
HanXRQChr14g0442551 Helianthus annuus HOM05D004017 ORTHO05D004612 4.0e-19 99.8 182 37.9
Phvul.002G116900 Phaseolus vulgaris HOM05D004017 ORTHO05D004612 5.3e-19 99.4 179 36.3
Sabra05G0084300 Salix brachista HOM05D004017 ORTHO05D004612 5.3e-19 99.4 173 38.7
PGR142G4352 Punica granatum HOM05D004017 ORTHO05D004612 6.9e-19 99.0 177 37.3
GSVIVG01026635001 Vitis vinifera HOM05D004017 ORTHO05D004612 6.9e-19 99.0 166 39.8
Medtr5g024250 Medicago truncatula HOM05D004017 ORTHO05D004612 9.0e-19 98.6 179 38.0
TPR.G33889 Trifolium pratense HOM05D004017 ORTHO05D004612 9.0e-19 98.6 179 38.0
Potri.005G101900 Populus trichocarpa HOM05D004017 ORTHO05D004612 1.2e-18 98.2 173 38.7
VMungo1215G1547 Vigna mungo HOM05D004017 ORTHO05D004612 1.2e-18 98.2 177 37.9
Aqoxy6G01621 Aquilegia oxysepala HOM05D004017 ORTHO05D004612 1.5e-18 97.8 179 38.5
Manes.02G114300 Manihot esculenta HOM05D004017 ORTHO05D004612 1.5e-18 97.8 173 34.7
THA.LOC104819715 Tarenaya hassleriana HOM05D004017 ORTHO05D004612 2.0e-18 97.4 164 37.8
Ca_24985_v3 Cicer arietinum L. HOM05D004017 ORTHO05D004612 2.6e-18 97.1 166 39.8
MD02G1114700 Malus domestica HOM05D004017 ORTHO05D004612 2.6e-18 97.1 174 36.8
CAN.G1238.14 Capsicum annuum HOM05D004017 ORTHO05D004612 4.5e-18 96.3 162 38.3
Ciclev10024702m.g Citrus clementina HOM05D004017 ORTHO05D004612 4.5e-18 96.3 168 37.5
Duzib147G1448 Durio zibethinus HOM05D004017 ORTHO05D004612 5.8e-18 95.9 170 37.1
Gohir.A02G178100 Gossypium hirsutum HOM05D004017 ORTHO05D004612 5.8e-18 95.9 170 37.6
Lalb_Chr16g0380061 Lupinus albus HOM05D004017 ORTHO05D004612 5.8e-18 95.9 166 38.0
Rhsim10G0195200 Rhododendron simsii HOM05D004017 ORTHO05D004612 5.8e-18 95.9 165 37.0
TWI09G1144 Tripterygium wilfordii HOM05D004017 ORTHO05D004612 5.8e-18 95.9 166 37.3
Gorai.003G002000 Gossypium raimondii HOM05D004017 ORTHO05D004612 7.6e-18 95.5 170 37.6
QL06p053019 Quercus lobata HOM05D004017 ORTHO05D004612 7.6e-18 95.5 164 39.0
CARHR243850 Cardamine hirsuta HOM05D004017 ORTHO05D004612 9.9e-18 95.1 172 37.2
AUR62002051 Chenopodium quinoa HOM05D004017 ORTHO05D004612 9.9e-18 95.1 168 37.5
AUR62003744 Chenopodium quinoa HOM05D004017 ORTHO05D004612 9.9e-18 95.1 168 37.5
AL7G15650 Arabidopsis lyrata HOM05D004017 ORTHO05D004612 1.3e-17 94.7 166 38.0
AagrBONN_evm.TU.Sc2ySwM_228.256 Anthoceros agrestis HOM05D004766 ORTHO05D006159 1.7e-17 94.4 173 35.3
Dinv28321 Davidia involucrata HOM05D004017 ORTHO05D004612 1.7e-17 94.4 173 37.6
Lj2g0020546 Lotus japonicus HOM05D004017 ORTHO05D004612 2.2e-17 94.0 177 35.6
Thhalv10024245m.g Eutrema salsugineum HOM05D004017 ORTHO05D004612 2.9e-17 93.6 166 38.0
Hund03598 Selenicereus undatus HOM05D004017 ORTHO05D004612 2.9e-17 93.6 168 36.3
A03p63640 Brassica napus HOM05D004017 ORTHO05D004612 3.8e-17 93.2 166 38.0
BraA03t15435Z Brassica rapa HOM05D004017 ORTHO05D004612 3.8e-17 93.2 166 38.0
Cpa.g.sc6.367 Carica papaya HOM05D004017 ORTHO05D004612 3.8e-17 93.2 163 36.8
ECA238G2486 Erigeron canadensis HOM05D004017 ORTHO05D004612 3.8e-17 93.2 166 37.3
Psat2g148040 Pisum sativum HOM05D004017 ORTHO05D004612 3.8e-17 93.2 180 37.2
C07p61210 Brassica napus HOM05D004017 ORTHO05D004612 4.9e-17 92.8 166 38.0
BolC7t46547H Brassica oleracea HOM05D004017 ORTHO05D004612 4.9e-17 92.8 166 38.0
Gohir.D03G001700 Gossypium hirsutum HOM05D004017 ORTHO05D004612 4.9e-17 92.8 170 37.1
Aa31LG6G12480 Aethionema arabicum HOM05D004017 ORTHO05D004612 6.4e-17 92.4 199 33.2
AT4G35520 Arabidopsis thaliana HOM05D004017 ORTHO05D004612 6.4e-17 92.4 166 37.3
Carub.0007s0480 Capsella rubella HOM05D004017 ORTHO05D004612 6.4e-17 92.4 166 37.3
Lsat_1_v5_gn_2_73681 Lactuca sativa HOM05D004017 ORTHO05D004612 8.4e-17 92.0 178 36.5
DCAR_016694 Daucus carota HOM05D004017 ORTHO05D004612 1.1e-16 91.7 171 37.4
SGA_v2.0_scaffold61G21182 Striga asiatica HOM05D004017 ORTHO05D004612 1.1e-16 91.7 166 36.7
CiPaw.07G002300 Carya illinoinensis HOM05D004017 ORTHO05D004612 1.4e-16 91.3 146 39.0
Eucgr.J02538 Eucalyptus grandis HOM05D004017 ORTHO05D004612 1.4e-16 91.3 172 35.5
Solyc02g082660.3 Solanum lycopersicum HOM05D004017 ORTHO05D004612 1.4e-16 91.3 166 35.5
ATR0807G175 Amborella trichopoda HOM05D004017 ORTHO05D004612 1.9e-16 90.9 173 38.2
Cc07_g11910 Coffea canephora HOM05D004017 ORTHO05D004612 1.9e-16 90.9 180 37.8
Thecc.01G005000 Theobroma cacao HOM05D004017 ORTHO05D004612 1.9e-16 90.9 170 35.9
CSS0022647 Camellia sinensis var. sinensis HOM05D004017 ORTHO05D004612 3.2e-16 90.1 169 39.1
CSS0031153 Camellia sinensis var. sinensis HOM05D004017 ORTHO05D004612 3.2e-16 90.1 169 39.1
CSS0034748 Camellia sinensis var. sinensis HOM05D004017 ORTHO05D004612 3.2e-16 90.1 169 39.1
Sopen02g027400 Solanum pennellii HOM05D004017 ORTHO05D004612 3.2e-16 90.1 166 34.9
Migut.L00851 Erythranthe guttata HOM05D004017 ORTHO05D004612 4.2e-16 89.7 168 35.7
CSS0019676 Camellia sinensis var. sinensis HOM05D004017 ORTHO05D004612 5.5e-16 89.4 169 38.5
CSS0016610 Camellia sinensis var. sinensis HOM05D004017 ORTHO05D004612 7.1e-16 89.0 169 38.5
Os09g0551900 Oryza sativa ssp. japonica HOM05D004017 ORTHO05D004612 7.1e-16 89.0 166 34.3
Migut.L00849 Erythranthe guttata HOM05D004017 ORTHO05D004612 9.3e-16 88.6 168 35.7
Nitab4.5_0001467g0030 Nicotiana tabacum HOM05D004017 ORTHO05D004612 9.3e-16 88.6 155 36.1
Nitab4.5_0004608g0030 Nicotiana tabacum HOM05D004017 ORTHO05D004612 9.3e-16 88.6 173 35.3
Peaxi162Scf00121g02447 Petunia axillaris HOM05D004017 ORTHO05D004612 3.5e-15 86.7 155 34.8
HPP92_020507 Vanilla planifolia HOM05D004017 ORTHO05D004612 3.5e-15 86.7 155 35.5
MD15G1230600 Malus domestica HOM05D004017 ORTHO05D004612 1.8e-14 84.3 163 35.0
Zm00001eb104330 Zea mays HOM05D004017 ORTHO05D004612 3.0e-14 83.6 168 32.1
Zm00001eb104360 Zea mays HOM05D004017 ORTHO05D004612 3.0e-14 83.6 168 32.1
SHI29525 Sapria himalayana HOM05D004017 ORTHO05D004612 1.6e-12 77.8 224 31.7
Sp7g33300 Schrenkiella parvula HOM05D004017 ORTHO05D004612 1.4e-11 74.7 155 35.5
vmacro20628 Vaccinium macrocarpon HOM05D004017 ORTHO05D004612 1.8e-11 74.3 108 40.7
Zm00001eb104340 Zea mays HOM05D004017 ORTHO05D004612 2.4e-11 73.9 150 31.3
TAR628G0604 Trochodendron aralioides HOM05D004017 ORTHO05D004612 5.3e-11 72.8 94 45.7
PRCOL_00002079 Prasinoderma coloniale HOM05D004017 ORTHO05D004612 9.0e-11 72.0 165 32.7
unitig_747.g21784 Utricularia gibba HOM05D004017 ORTHO05D004612 2.6e-10 70.5 170 34.1
arahy.Tifrunner.gnm1.ann1.4CZ79I Arachis hypogaea HOM05D004017 ORTHO05D004612 9.3e-08 62.0 49 55.1
arahy.Tifrunner.gnm1.ann1.FZX4ED Arachis hypogaea HOM05D004017 ORTHO05D004612 9.3e-08 62.0 49 55.1
ClCG10G000180 Citrullus lanatus HOM05D004017 ORTHO05D004612 2.7e-07 60.5 62 46.8
Cre07.g336650 Chlamydomonas reinhardtii HOM05D004017 ORTHO05D004612 2.3e-06 57.4 102 36.3


User provided reference genes

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