Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CBR_g54315 Chara braunii HOM05D006173 ORTHO05D007685 1.6e-241 839.0 408 100.0
SEGI_22413 Sequoiadendron giganteum HOM05D006173 ORTHO05D007685 2.9e-65 253.4 348 40.8
Os12g0129400 Oryza sativa ssp. japonica HOM05D006173 ORTHO05D007685 5.6e-61 239.2 345 38.3
Lj1g0020171 Lotus japonicus HOM05D006173 ORTHO05D007685 2.1e-60 237.3 344 38.4
TPR.G27968 Trifolium pratense HOM05D006173 ORTHO05D007685 8.1e-60 235.3 340 39.1
Ciclev10011725m.g Citrus clementina HOM05D006173 ORTHO05D007685 1.8e-59 234.2 338 38.5
Phvul.001G116600 Phaseolus vulgaris HOM05D006173 ORTHO05D007685 3.1e-59 233.4 345 38.8
Medtr7g088540 Medicago truncatula HOM05D006173 ORTHO05D007685 4.0e-59 233.0 346 37.3
Gorai.007G351000 Gossypium raimondii HOM05D006173 ORTHO05D007685 5.2e-59 232.6 338 39.1
Lsat_1_v5_gn_9_32341 Lactuca sativa HOM05D006173 ORTHO05D007685 6.8e-59 232.3 324 39.2
Gohir.A11G305400 Gossypium hirsutum HOM05D006173 ORTHO05D007685 8.9e-59 231.9 338 39.1
VMungo0331G1996 Vigna mungo HOM05D006173 ORTHO05D007685 8.9e-59 231.9 328 38.4
arahy.Tifrunner.gnm1.ann1.NS6SL1 Arachis hypogaea HOM05D006173 ORTHO05D007685 1.2e-58 231.5 337 37.1
Os11g0132700 Oryza sativa ssp. japonica HOM05D006173 ORTHO05D007685 1.2e-58 231.5 345 37.4
Gohir.D11G320800 Gossypium hirsutum HOM05D006173 ORTHO05D007685 2.0e-58 230.7 338 38.8
Thecc.05G131000 Theobroma cacao HOM05D006173 ORTHO05D007685 2.0e-58 230.7 339 38.9
Duzib106G1718 Durio zibethinus HOM05D006173 ORTHO05D007685 2.6e-58 230.3 338 38.8
Cpa.g.sc33.197 Carica papaya HOM05D006173 ORTHO05D007685 3.4e-58 229.9 341 37.2
Mapoly0010s0124 Marchantia polymorpha HOM05D006173 ORTHO05D007685 3.4e-58 229.9 465 35.7
FAN10G0117 Fragaria x ananassa HOM05D006173 ORTHO05D007685 4.4e-58 229.6 350 38.9
PSO541G4485 Papaver somniferum HOM05D006173 ORTHO05D007685 7.6e-58 228.8 338 39.9
CsaV3_3G039830 Cucumis sativus L. HOM05D006173 ORTHO05D007685 9.9e-58 228.4 331 37.5
EL10Ac3g07343 Beta vulgaris HOM05D006173 ORTHO05D007685 1.3e-57 228.0 342 38.6
Actinidia17973 Actinidia chinensis HOM05D006173 ORTHO05D007685 1.7e-57 227.6 337 37.1
Potri.016G030400 Populus trichocarpa HOM05D006173 ORTHO05D007685 2.9e-57 226.9 337 37.4
HanXRQChr14g0457301 Helianthus annuus HOM05D006173 ORTHO05D007685 4.9e-57 226.1 336 38.7
Zm00001eb405260 Zea mays HOM05D006173 ORTHO05D007685 1.1e-56 224.9 339 38.6
Hma1.2p1_0044F.1_g026020 Hydrangea macrophylla HOM05D006173 ORTHO05D007685 2.4e-56 223.8 349 36.1
SMO116G0186 Selaginella moellendorffii HOM05D006173 ORTHO05D007685 4.1e-56 223.0 354 36.7
SMO133G0039 Selaginella moellendorffii HOM05D006173 ORTHO05D007685 5.4e-56 222.6 354 36.7
CDE02G3082 Ceratophyllum demersum HOM05D006173 ORTHO05D007685 1.6e-55 221.1 317 38.5
Haze_20298 Corylus avellana HOM05D006173 ORTHO05D007685 2.1e-55 220.7 357 36.7
Cc06_g22820 Coffea canephora HOM05D006173 ORTHO05D007685 6.0e-55 219.2 359 35.9
Glyma.03G120400 Glycine max HOM05D006173 ORTHO05D007685 3.0e-54 216.9 341 37.2
PSO675G1003 Papaver somniferum HOM05D006173 ORTHO05D007685 3.9e-54 216.5 338 39.1
ECA247G0085 Erigeron canadensis HOM05D006173 ORTHO05D007685 3.3e-53 213.4 336 35.7
Glyma.19G125000 Glycine max HOM05D006173 ORTHO05D007685 1.2e-52 211.5 341 37.0
Thhalv10005968m.g Eutrema salsugineum HOM05D006173 ORTHO05D007685 1.6e-52 211.1 339 34.8
Cfa019941 Carpinus fangiana HOM05D006173 ORTHO05D007685 3.6e-52 209.9 338 37.0
BcaC07g40002 Brassica carinata HOM05D006173 ORTHO05D007685 3.1e-51 206.8 339 34.2
BcaC07g40109 Brassica carinata HOM05D006173 ORTHO05D007685 3.1e-51 206.8 340 34.1
CiPaw.10G124100 Carya illinoinensis HOM05D006173 ORTHO05D007685 3.1e-51 206.8 338 36.7
A09p49770 Brassica napus HOM05D006173 ORTHO05D007685 6.8e-51 205.7 386 32.6
BraA09t40430Z Brassica rapa HOM05D006173 ORTHO05D007685 6.8e-51 205.7 386 32.6
ClCG10G016510 Citrullus lanatus HOM05D006173 ORTHO05D007685 8.9e-51 205.3 377 34.0
Pp3c11_18220 Physcomitrium patens HOM05D006173 ORTHO05D007685 1.2e-50 204.9 465 31.6
Manes.10G077600 Manihot esculenta HOM05D006173 ORTHO05D007685 1.5e-50 204.5 337 34.7
Peaxi162Scf00937g00117 Petunia axillaris HOM05D006173 ORTHO05D007685 2.6e-50 203.8 324 37.3
Hund19061 Selenicereus undatus HOM05D006173 ORTHO05D007685 2.6e-50 203.8 303 38.9
FvH4_7g04320 Fragaria vesca HOM05D006173 ORTHO05D007685 3.4e-50 203.4 338 36.7
C08p32150 Brassica napus HOM05D006173 ORTHO05D007685 4.4e-50 203.0 346 33.8
Prupe.7G021600 Prunus persica HOM05D006173 ORTHO05D007685 4.4e-50 203.0 338 35.5
Atru.chr1.1516 Acer truncatum HOM05D006173 ORTHO05D007685 5.8e-50 202.6 338 35.8
BolC8t50833H Brassica oleracea HOM05D006173 ORTHO05D007685 5.8e-50 202.6 346 33.5
Eucgr.K01689 Eucalyptus grandis HOM05D006173 ORTHO05D007685 9.9e-50 201.8 338 35.8
arahy.Tifrunner.gnm1.ann1.TSE1DU Arachis hypogaea HOM05D006173 ORTHO05D007685 1.3e-49 201.4 336 36.6
Oeu060754.2 Olea europaea HOM05D006173 ORTHO05D007685 1.3e-49 201.4 379 31.7
Dinv10196 Davidia involucrata HOM05D006173 ORTHO05D007685 1.7e-49 201.1 339 35.1
Migut.K00169 Erythranthe guttata HOM05D006173 ORTHO05D007685 2.2e-49 200.7 388 34.3
Sabra16G0033900 Salix brachista HOM05D006173 ORTHO05D007685 3.8e-49 199.9 387 32.8
PGR142G0634 Punica granatum HOM05D006173 ORTHO05D007685 6.4e-49 199.1 337 35.3
Sed0007984 Sechium edule HOM05D006173 ORTHO05D007685 6.4e-49 199.1 337 35.6
THA.LOC104814894 Tarenaya hassleriana HOM05D006173 ORTHO05D007685 6.4e-49 199.1 338 35.2
TWI74G0774 Tripterygium wilfordii HOM05D006173 ORTHO05D007685 6.4e-49 199.1 344 32.8
MELO3C009724.2 Cucumis melo HOM05D006173 ORTHO05D007685 8.4e-49 198.7 337 34.7
Sopen08g011280 Solanum pennellii HOM05D006173 ORTHO05D007685 8.4e-49 198.7 337 35.3
PGSC0003DMG400017881 Solanum tuberosum HOM05D006173 ORTHO05D007685 1.1e-48 198.4 337 35.3
FAN01G1644 Fragaria x ananassa HOM05D006173 ORTHO05D007685 1.4e-48 198.0 442 31.2
Solyc08g016801.1 Solanum lycopersicum HOM05D006173 ORTHO05D007685 2.4e-48 197.2 337 35.0
AUR62020996 Chenopodium quinoa HOM05D006173 ORTHO05D007685 1.2e-47 194.9 336 35.1
Aqoxy3G01734 Aquilegia oxysepala HOM05D006173 ORTHO05D007685 1.6e-47 194.5 323 34.7
TAR623G0939 Trochodendron aralioides HOM05D006173 ORTHO05D007685 2.7e-47 193.7 240 40.4
MSTRG.10773 Avicennia marina HOM05D006173 ORTHO05D007685 7.8e-47 192.2 336 34.2
Aa31LG10G11760 Aethionema arabicum HOM05D006173 ORTHO05D007685 1.3e-46 191.4 537 27.0
Nitab4.5_0003840g0020 Nicotiana tabacum HOM05D006173 ORTHO05D007685 2.3e-46 190.7 230 41.7
AUR62018437 Chenopodium quinoa HOM05D006173 ORTHO05D007685 1.1e-45 188.3 251 40.6
Lalb_Chr22g0358001 Lupinus albus HOM05D006173 ORTHO05D007685 1.5e-45 188.0 196 45.9
vmacro07758 Vaccinium macrocarpon HOM05D006173 ORTHO05D007685 1.3e-44 184.9 366 34.2
FAN06G1001 Fragaria x ananassa HOM05D006173 ORTHO05D007685 1.6e-44 184.5 195 47.2
AT3G56900 Arabidopsis thaliana HOM05D006173 ORTHO05D007685 2.1e-44 184.1 340 32.6
GSVIVG01025850001 Vitis vinifera HOM05D006173 ORTHO05D007685 2.1e-44 184.1 195 46.2
AL5G38300 Arabidopsis lyrata HOM05D006173 ORTHO05D007685 4.8e-44 183.0 340 32.6
Carub.0005s2364 Capsella rubella HOM05D006173 ORTHO05D007685 6.2e-44 182.6 340 32.4
MD14G1101100 Malus domestica HOM05D006173 ORTHO05D007685 6.2e-44 182.6 195 47.7
RcHm_v2.0_Chr1g0329271 Rosa chinensis HOM05D006173 ORTHO05D007685 1.1e-43 181.8 195 46.7
Psat3g082320 Pisum sativum HOM05D006173 ORTHO05D007685 2.4e-43 180.6 248 41.5
CARHR167050 Cardamine hirsuta HOM05D006173 ORTHO05D007685 3.1e-43 180.3 340 32.4
MBI19_g25019_MAGBIO Magnolia biondii HOM05D006173 ORTHO05D007685 2.0e-42 177.6 302 34.4
Sp5g05690 Schrenkiella parvula HOM05D006173 ORTHO05D007685 2.0e-42 177.6 340 32.1
ATR0307G134 Amborella trichopoda HOM05D006173 ORTHO05D007685 2.6e-42 177.2 194 43.8
MD12G1112000 Malus domestica HOM05D006173 ORTHO05D007685 4.4e-42 176.4 421 30.6
Sc19g0007880 Simmondsia chinensis HOM05D006173 ORTHO05D007685 5.8e-42 176.0 236 40.7
Ca_08352_v3 Cicer arietinum L. HOM05D006173 ORTHO05D007685 9.9e-42 175.3 232 40.5
CSS0033436 Camellia sinensis var. sinensis HOM05D006173 ORTHO05D007685 9.3e-40 168.7 356 33.4
QL07p014498 Quercus lobata HOM05D006173 ORTHO05D007685 1.0e-38 165.2 182 43.4
Nitab4.5_0000211g0120 Nicotiana tabacum HOM05D006173 ORTHO05D007685 1.5e-37 161.4 251 38.2
SMO069G0001 Selaginella moellendorffii HOM05D006173 ORTHO05D007685 1.5e-37 161.4 194 39.2
RhsimUnG0020600 Rhododendron simsii HOM05D006173 ORTHO05D007685 8.1e-36 155.6 268 34.7
SGA_v2.0_scaffold106G30556 Striga asiatica HOM05D006173 ORTHO05D007685 1.8e-35 154.5 338 31.1
SalBow1G0987 Salvia bowleyana HOM05D006173 ORTHO05D007685 2.6e-34 150.6 345 29.9
HPP92_002170 Vanilla planifolia HOM05D006173 ORTHO05D007685 4.2e-32 143.3 165 44.2
unitig_46.g18486 Utricularia gibba HOM05D006173 ORTHO05D007685 7.4e-29 132.5 97 58.8
Solyc08g016808.1 Solanum lycopersicum HOM05D006173 ORTHO05D007685 1.3e-28 131.7 222 34.7
VMungo1383G1641 Vigna mungo HOM05D006173 ORTHO05D007685 6.5e-25 119.4 228 32.0
Lj1A24G66 Lonicera japonica HOM05D006173 ORTHO05D007685 3.0e-22 110.5 150 38.0
PRCOL_00002577 Prasinoderma coloniale HOM05D006173 ORTHO05D007685 1.6e-20 104.8 223 32.3
CANSAT64G0701 Cannabis sativa HOM05D006173 ORTHO05D007685 1.7e-17 94.7 131 38.2
Lj2A730T36 Lonicera japonica HOM05D006173 ORTHO05D007685 1.8e-14 84.7 222 27.5
ATR0307G100 Amborella trichopoda HOM05D006173 ORTHO05D007685 1.1e-13 82.0 144 34.0
DCAR_020632 Daucus carota HOM05D002466 ORTHO05D002668 6.3e-12 76.3 144 29.9
TAR623G0990 Trochodendron aralioides HOM05D006173 ORTHO05D007685 6.9e-11 72.8 47 63.8
HPP92_002168 Vanilla planifolia HOM05D006173 ORTHO05D007685 1.2e-10 72.0 122 30.3
RcHm_v2.0_Chr1g0329281 Rosa chinensis HOM05D006173 ORTHO05D007685 1.5e-10 71.6 77 41.6
FAN03G1994 Fragaria x ananassa HOM05D006173 ORTHO05D007685 2.6e-10 70.9 152 30.3
Lalb_Chr22g0357991 Lupinus albus HOM05D006173 ORTHO05D007685 3.4e-10 70.5 144 30.6
MD14G1101000 Malus domestica HOM05D006173 ORTHO05D007685 1.3e-09 68.6 162 29.0
Lj1A24G67 Lonicera japonica HOM05D006173 ORTHO05D007685 3.8e-09 67.0 158 28.5
Solyc08g036600.3 Solanum lycopersicum HOM05D006173 ORTHO05D007685 5.0e-09 66.6 71 38.0
MCO12G281 Micromonas commoda HOM05D006173 ORTHO05D007685 1.4e-08 65.1 117 31.6
Lsat_1_v5_gn_4_93961 Lactuca sativa HOM05D006173 ORTHO05D007685 1.9e-08 64.7 48 52.1
GSVIVG01025851001 Vitis vinifera HOM05D006173 ORTHO05D007685 4.2e-08 63.5 65 41.5
Lj2A730T35 Lonicera japonica HOM05D006173 ORTHO05D007685 2.1e-07 61.2 56 46.4
Nitab4.5_0000275g0010 Nicotiana tabacum HOM05D006173 ORTHO05D007685 2.7e-07 60.8 44 54.5
QL07p014493 Quercus lobata HOM05D006173 ORTHO05D007685 3.6e-07 60.5 65 40.0


User provided reference genes

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