Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CBR_g51833 Chara braunii HOM05D004899 ORTHO05D006580 1.1e-279 966.1 542 100.0
THA.LOC104820770 Tarenaya hassleriana HOM05D004899 ORTHO05D006580 2.3e-62 244.2 541 33.1
BolC3t16350H Brassica oleracea HOM05D004899 ORTHO05D006580 2.6e-61 240.7 545 33.9
BraA03t12536Z Brassica rapa HOM05D004899 ORTHO05D006580 9.7e-61 238.8 542 33.2
SMO367G0182 Selaginella moellendorffii HOM05D004899 ORTHO05D006580 9.7e-61 238.8 538 34.4
BcaC01g04376 Brassica carinata HOM05D004899 ORTHO05D006580 1.3e-60 238.4 545 33.8
C03p40810 Brassica napus HOM05D004899 ORTHO05D006580 1.3e-60 238.4 545 33.8
AagrBONN_evm.TU.Sc2ySwM_228.2413 Anthoceros agrestis HOM05D004899 ORTHO05D006580 1.7e-60 238.0 541 34.0
A05p43040 Brassica napus HOM05D004899 ORTHO05D006580 2.8e-60 237.3 543 31.5
A03p33610 Brassica napus HOM05D004899 ORTHO05D006580 3.7e-60 236.9 542 33.4
Carub.0003s0362 Capsella rubella HOM05D004899 ORTHO05D006580 2.4e-59 234.2 545 33.6
Sp3g03310 Schrenkiella parvula HOM05D004899 ORTHO05D006580 5.3e-59 233.0 545 33.4
AL3G14410 Arabidopsis lyrata HOM05D004899 ORTHO05D006580 5.9e-58 229.6 542 33.8
Thecc.05G269900 Theobroma cacao HOM05D004899 ORTHO05D006580 5.9e-58 229.6 540 33.1
Duzib106G1539 Durio zibethinus HOM05D004899 ORTHO05D006580 1.0e-57 228.8 540 33.1
ECA233G1223 Erigeron canadensis HOM05D004899 ORTHO05D006580 1.0e-57 228.8 539 33.2
AT3G04460 Arabidopsis thaliana HOM05D004899 ORTHO05D006580 1.7e-57 228.0 541 33.8
Thhalv10020878m.g Eutrema salsugineum HOM05D004899 ORTHO05D006580 8.5e-57 225.7 542 31.9
Gorai.007G274800 Gossypium raimondii HOM05D004899 ORTHO05D006580 1.4e-56 224.9 539 32.5
Gohir.D11G256500 Gossypium hirsutum HOM05D004899 ORTHO05D006580 2.5e-56 224.2 539 32.5
BcaC05g30197 Brassica carinata HOM05D004899 ORTHO05D006580 3.2e-56 223.8 550 31.5
Pp3c17_6400 Physcomitrium patens HOM05D004899 ORTHO05D006580 3.2e-56 223.8 539 33.4
Gohir.A11G246300 Gossypium hirsutum HOM05D004899 ORTHO05D006580 2.1e-55 221.1 539 32.1
arahy.Tifrunner.gnm1.ann1.A8VMLZ Arachis hypogaea HOM05D004899 ORTHO05D006580 1.0e-54 218.8 540 33.3
PSO674G0057 Papaver somniferum HOM05D004899 ORTHO05D006580 1.0e-54 218.8 540 32.6
Aa31LG5G14890 Aethionema arabicum HOM05D004899 ORTHO05D006580 2.3e-54 217.6 542 33.4
arahy.Tifrunner.gnm1.ann1.VXFY9N Arachis hypogaea HOM05D004899 ORTHO05D006580 2.3e-54 217.6 540 33.3
Nn1g02931 Nelumbo nucifera HOM05D004899 ORTHO05D006580 3.0e-54 217.2 539 32.7
MBI07_g12932_MAGBIO Magnolia biondii HOM05D004899 ORTHO05D006580 3.9e-54 216.9 540 33.0
MSTRG.8229 Avicennia marina HOM05D004899 ORTHO05D006580 5.2e-54 216.5 540 33.1
Hund22166 Selenicereus undatus HOM05D004899 ORTHO05D006580 5.2e-54 216.5 540 32.0
CDE05G2618 Ceratophyllum demersum HOM05D004899 ORTHO05D006580 2.0e-53 214.5 542 33.2
Potri.013G047800 Populus trichocarpa HOM05D004899 ORTHO05D006580 2.0e-53 214.5 540 31.7
RcHm_v2.0_Chr3g0449481 Rosa chinensis HOM05D004899 ORTHO05D006580 2.0e-53 214.5 540 32.2
TWI36G0265 Tripterygium wilfordii HOM05D004899 ORTHO05D006580 2.0e-53 214.5 540 33.1
FAN05G0331 Fragaria x ananassa HOM05D004899 ORTHO05D006580 5.7e-53 213.0 540 31.9
FAN05G3121 Fragaria x ananassa HOM05D004899 ORTHO05D006580 5.7e-53 213.0 540 31.9
Potri.019G020000 Populus trichocarpa HOM05D004899 ORTHO05D006580 9.7e-53 212.2 539 31.5
HanXRQChr08g0216941 Helianthus annuus HOM05D004899 ORTHO05D006580 1.7e-52 211.5 539 32.1
MD04G1231200 Malus domestica HOM05D004899 ORTHO05D006580 2.2e-52 211.1 540 33.0
Prupe.6G350900 Prunus persica HOM05D004899 ORTHO05D006580 2.8e-52 210.7 540 33.0
VMungo0540G0495 Vigna mungo HOM05D004899 ORTHO05D006580 2.8e-52 210.7 546 31.7
Aqoxy5G00161 Aquilegia oxysepala HOM05D004899 ORTHO05D006580 3.7e-52 210.3 540 32.0
Os10g0467200 Oryza sativa ssp. japonica HOM05D004899 ORTHO05D006580 4.8e-52 209.9 539 30.6
Sed0011238 Sechium edule HOM05D004899 ORTHO05D006580 4.8e-52 209.9 545 32.3
Dinv06242 Davidia involucrata HOM05D004899 ORTHO05D006580 6.3e-52 209.5 540 32.0
Cc02_g08720 Coffea canephora HOM05D004899 ORTHO05D006580 8.2e-52 209.1 546 32.4
EL10Ac4g08990 Beta vulgaris HOM05D004899 ORTHO05D006580 1.1e-51 208.8 540 32.0
FvH4_6g01740 Fragaria vesca HOM05D004899 ORTHO05D006580 1.1e-51 208.8 540 31.7
Sc20g0000690 Simmondsia chinensis HOM05D004899 ORTHO05D006580 1.4e-51 208.4 539 32.1
Ca_11390_v3 Cicer arietinum L. HOM05D004899 ORTHO05D006580 2.4e-51 207.6 541 31.8
CiPaw.08G118600 Carya illinoinensis HOM05D004899 ORTHO05D006580 3.1e-51 207.2 539 31.2
FAN09G4068 Fragaria x ananassa HOM05D004899 ORTHO05D006580 3.1e-51 207.2 540 31.9
Zm00001eb046420 Zea mays HOM05D004899 ORTHO05D006580 3.1e-51 207.2 540 31.5
FAN14G2287 Fragaria x ananassa HOM05D004899 ORTHO05D006580 4.1e-51 206.8 540 31.9
FAN14G4075 Fragaria x ananassa HOM05D004899 ORTHO05D006580 4.1e-51 206.8 540 31.9
Rhsim09G0133700 Rhododendron simsii HOM05D004899 ORTHO05D006580 4.1e-51 206.8 540 31.7
Migut.F01538 Erythranthe guttata HOM05D004899 ORTHO05D006580 5.3e-51 206.5 540 32.0
Peaxi162Scf00015g02911 Petunia axillaris HOM05D004899 ORTHO05D006580 5.3e-51 206.5 540 32.2
ATR0736G049 Amborella trichopoda HOM05D004899 ORTHO05D006580 7.0e-51 206.1 543 31.3
Manes.08G140200 Manihot esculenta HOM05D004899 ORTHO05D006580 7.0e-51 206.1 540 32.2
TAR362G0172 Trochodendron aralioides HOM05D004899 ORTHO05D006580 7.0e-51 206.1 540 31.9
AUR62040914 Chenopodium quinoa HOM05D004899 ORTHO05D006580 1.2e-50 205.3 540 30.2
Eucgr.B02154 Eucalyptus grandis HOM05D004899 ORTHO05D006580 1.6e-50 204.9 539 32.8
SGA_v2.0_scaffold426G51496 Striga asiatica HOM05D004899 ORTHO05D006580 1.6e-50 204.9 540 32.2
BcaB04g19333 Brassica carinata HOM05D004899 ORTHO05D006580 2.6e-50 204.1 525 30.7
Sabra19G0032200 Salix brachista HOM05D004899 ORTHO05D006580 2.6e-50 204.1 539 31.4
Actinidia34758 Actinidia chinensis HOM05D004899 ORTHO05D006580 4.5e-50 203.4 539 31.9
CSS0003371 Camellia sinensis var. sinensis HOM05D004899 ORTHO05D006580 7.7e-50 202.6 542 31.7
ClCG11G010490 Citrullus lanatus HOM05D004899 ORTHO05D006580 1.0e-49 202.2 544 32.4
CANSAT54G0581 Cannabis sativa HOM05D004899 ORTHO05D006580 1.3e-49 201.8 540 32.0
Glyma.19G247700 Glycine max HOM05D004899 ORTHO05D006580 1.3e-49 201.8 539 30.2
Lj1g0026343 Lotus japonicus HOM05D004899 ORTHO05D006580 1.3e-49 201.8 555 31.7
PGSC0003DMG400023503 Solanum tuberosum HOM05D004899 ORTHO05D006580 2.9e-49 200.7 540 31.7
Lsat_1_v5_gn_8_25181 Lactuca sativa HOM05D004899 ORTHO05D006580 5.0e-49 199.9 539 31.0
SalBow6G5574 Salvia bowleyana HOM05D004899 ORTHO05D006580 5.0e-49 199.9 563 31.6
Phvul.006G104800 Phaseolus vulgaris HOM05D004899 ORTHO05D006580 6.5e-49 199.5 539 31.4
Sopen05g033410 Solanum pennellii HOM05D004899 ORTHO05D006580 6.5e-49 199.5 540 31.3
PGR142G4366 Punica granatum HOM05D004899 ORTHO05D006580 8.5e-49 199.1 540 32.6
BcaC05g29943 Brassica carinata HOM05D004899 ORTHO05D006580 1.5e-48 198.4 543 30.4
Solyc05g054950.2 Solanum lycopersicum HOM05D004899 ORTHO05D006580 1.5e-48 198.4 540 31.3
GSVIVG01023441001 Vitis vinifera HOM05D004899 ORTHO05D006580 1.5e-48 198.4 540 31.7
CsaV3_2G009880 Cucumis sativus L. HOM05D004899 ORTHO05D006580 4.2e-48 196.8 543 31.3
QL03p029772 Quercus lobata HOM05D004899 ORTHO05D006580 5.5e-48 196.4 558 31.5
CAN.G1465.15 Capsicum annuum HOM05D004899 ORTHO05D006580 7.2e-48 196.1 543 31.1
MELO3C008694.2 Cucumis melo HOM05D004899 ORTHO05D006580 7.2e-48 196.1 544 31.4
Glyma.03G250100 Glycine max HOM05D004899 ORTHO05D006580 9.4e-48 195.7 542 30.8
TPR.G10414 Trifolium pratense HOM05D004899 ORTHO05D006580 8.8e-46 189.1 540 30.4
COL.COLO4_15501 Corchorus olitorius HOM05D004899 ORTHO05D006580 2.0e-45 188.0 524 30.0
Nitab4.5_0003965g0030 Nicotiana tabacum HOM05D004899 ORTHO05D006580 2.6e-45 187.6 541 30.3
AUR62004828 Chenopodium quinoa HOM05D004899 ORTHO05D006580 1.7e-44 184.9 504 30.8
Lj2A44T81 Lonicera japonica HOM05D004899 ORTHO05D006580 1.8e-43 181.4 542 31.0
Lalb_Chr04g0253351 Lupinus albus HOM05D004899 ORTHO05D006580 5.3e-43 179.9 541 30.9
C05p62800 Brassica napus HOM05D004899 ORTHO05D006580 7.0e-43 179.5 527 29.6
Nitab4.5_0000914g0090 Nicotiana tabacum HOM05D004899 ORTHO05D006580 3.8e-41 173.7 538 30.5
Ciclev10024089m.g Citrus clementina HOM05D004899 ORTHO05D006580 5.5e-40 169.9 519 31.4
Atru.chr2.1001 Acer truncatum HOM05D004899 ORTHO05D006580 1.2e-39 168.7 518 31.1
DCAR_023087 Daucus carota HOM05D004899 ORTHO05D006580 2.3e-38 164.5 519 29.5
Mapoly0097s0077 Marchantia polymorpha HOM05D004899 ORTHO05D006580 1.2e-37 162.2 457 28.7
unitig_899.g15065 Utricularia gibba HOM05D004899 ORTHO05D006580 4.8e-36 156.8 541 28.8
Medtr1g116380 Medicago truncatula HOM05D004899 ORTHO05D006580 7.0e-35 152.9 520 28.7
Cre06.g263602 Chlamydomonas reinhardtii HOM05D004899 ORTHO05D006580 5.9e-34 149.8 556 28.6
Cpa.g.sc306.4 Carica papaya HOM05D004899 ORTHO05D006580 6.5e-33 146.4 540 25.6
PRCOL_00005674 Prasinoderma coloniale HOM05D004899 ORTHO05D006580 6.5e-33 146.4 529 27.0
Ah.06g191810 Amaranthus hybridus HOM05D004899 ORTHO05D006580 8.6e-33 146.0 539 25.4
vmacro10377 Vaccinium macrocarpon HOM05D004899 ORTHO05D006580 3.2e-32 144.1 572 27.1
HPP92_008536 Vanilla planifolia HOM05D004899 ORTHO05D006580 2.1e-31 141.4 229 37.6
TPR.G8890 Trifolium pratense HOM05D001167 ORTHO05D001054 2.2e-28 131.3 134 45.5
CARHR078600 Cardamine hirsuta HOM05D004899 ORTHO05D006580 2.4e-27 127.9 120 55.0
RhsimUnG0045000 Rhododendron simsii HOM05D004899 ORTHO05D006580 1.6e-26 125.2 205 36.6
Psat0s1997g0040 Pisum sativum HOM05D004899 ORTHO05D006580 2.3e-25 121.3 436 28.0
CARHR078590 Cardamine hirsuta HOM05D004899 ORTHO05D006580 2.3e-22 111.3 202 37.1
BolC5t34933H Brassica oleracea HOM05D004899 ORTHO05D006580 4.0e-22 110.5 89 61.8
MCO09G554 Micromonas commoda HOM05D004899 ORTHO05D006580 6.8e-22 109.8 538 25.7
BraA05t23048Z Brassica rapa HOM05D004899 ORTHO05D006580 1.2e-21 109.0 89 60.7
Hma1.2p1_1336F.1_g276500 Hydrangea macrophylla HOM05D004899 ORTHO05D006580 2.9e-20 104.4 89 58.4
Oeu050631.1 Olea europaea HOM05D004899 ORTHO05D006580 4.9e-20 103.6 89 57.3
Oeu040904.1 Olea europaea HOM05D004899 ORTHO05D006580 3.2e-19 100.9 68 60.3
SHI31416 Sapria himalayana HOM05D004899 ORTHO05D006580 1.6e-15 88.6 195 36.9
Haze_04413 Corylus avellana HOM05D004899 ORTHO05D006580 1.4e-14 85.5 378 27.0
Cc06_g01540 Coffea canephora HOM05D004899 ORTHO05D006580 9.8e-13 79.3 108 43.5
MD08G1214200 Malus domestica HOM05D004899 ORTHO05D006580 9.8e-13 79.3 70 55.7
SEGI_06182 Sequoiadendron giganteum HOM05D004899 ORTHO05D006580 1.1e-11 75.9 81 49.4
Psat3g057720 Pisum sativum HOM05D004899 ORTHO05D006580 2.0e-10 71.6 46 54.3
Cc05_g01300 Coffea canephora HOM05D004899 ORTHO05D006580 9.5e-08 62.8 116 37.1
C01p22380 Brassica napus HOM05D004899 ORTHO05D006580 5.2e-06 57.0 46 58.7


User provided reference genes

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