Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CBR_g51515 Chara braunii HOM05D006620 ORTHO05D008921 0.0e+00 1424.5 700 100.0
Pp3c2_21860 Physcomitrium patens HOM05D006620 ORTHO05D008921 1.2e-193 680.6 475 69.1
AagrBONN_evm.TU.Sc2ySwM_228.367 Anthoceros agrestis HOM05D006620 ORTHO05D008921 2.3e-192 676.4 421 74.3
Mapoly0088s0008 Marchantia polymorpha HOM05D006620 ORTHO05D008921 2.1e-188 663.3 468 68.8
Aqoxy5G00083 Aquilegia oxysepala HOM05D006620 ORTHO05D008921 1.5e-186 657.1 421 72.7
MELO3C006358.2 Cucumis melo HOM05D006620 ORTHO05D008921 1.9e-186 656.8 449 69.5
Manes.15G048100 Manihot esculenta HOM05D006620 ORTHO05D008921 3.3e-186 656.0 441 70.1
Glyma.10G128400 Glycine max HOM05D006620 ORTHO05D008921 5.6e-186 655.2 448 69.0
Dinv29777 Davidia involucrata HOM05D006620 ORTHO05D008921 7.3e-186 654.8 421 72.2
Potri.010G062300 Populus trichocarpa HOM05D006620 ORTHO05D008921 9.6e-186 654.4 420 72.4
Atru.chr4.1848 Acer truncatum HOM05D006620 ORTHO05D008921 1.2e-185 654.1 421 72.4
CsaV3_3G011480 Cucumis sativus L. HOM05D006620 ORTHO05D008921 1.6e-185 653.7 450 69.3
FvH4_4g05310 Fragaria vesca HOM05D006620 ORTHO05D008921 1.6e-185 653.7 421 71.7
TPR.G24008 Trifolium pratense HOM05D006620 ORTHO05D008921 1.6e-185 653.7 429 71.6
Actinidia25091 Actinidia chinensis HOM05D006620 ORTHO05D008921 2.8e-185 652.9 445 69.0
Medtr1g046250 Medicago truncatula HOM05D006620 ORTHO05D008921 3.6e-185 652.5 437 69.8
TAR365G0583 Trochodendron aralioides HOM05D006620 ORTHO05D008921 1.1e-184 651.0 452 68.4
RcHm_v2.0_Chr4g0396281 Rosa chinensis HOM05D006620 ORTHO05D008921 1.4e-184 650.6 421 71.7
CiPaw.02G103900 Carya illinoinensis HOM05D006620 ORTHO05D008921 1.8e-184 650.2 445 68.5
Ciclev10004924m.g Citrus clementina HOM05D006620 ORTHO05D008921 1.8e-184 650.2 421 72.0
Prupe.1G054600 Prunus persica HOM05D006620 ORTHO05D008921 1.8e-184 650.2 420 72.6
GSVIVG01028992001 Vitis vinifera HOM05D006620 ORTHO05D008921 1.8e-184 650.2 421 72.0
Lalb_Chr01g0011271 Lupinus albus HOM05D006620 ORTHO05D008921 2.4e-184 649.8 450 69.1
Sed0017900 Sechium edule HOM05D006620 ORTHO05D008921 2.4e-184 649.8 452 68.1
SGA_v2.0_scaffold57G20185 Striga asiatica HOM05D006620 ORTHO05D008921 3.1e-184 649.4 421 71.5
Cpa.g.sc59.55 Carica papaya HOM05D006620 ORTHO05D008921 4.0e-184 649.0 448 68.3
ClCG05G003790 Citrullus lanatus HOM05D006620 ORTHO05D008921 5.2e-184 648.7 443 69.3
Lj6g0024353 Lotus japonicus HOM05D006620 ORTHO05D008921 5.2e-184 648.7 447 69.1
CSS0026751 Camellia sinensis var. sinensis HOM05D006620 ORTHO05D008921 6.8e-184 648.3 421 71.5
FAN12G0711 Fragaria x ananassa HOM05D006620 ORTHO05D008921 6.8e-184 648.3 422 71.6
FAN17G2880 Fragaria x ananassa HOM05D006620 ORTHO05D008921 6.8e-184 648.3 421 71.5
PSO764G0126 Papaver somniferum HOM05D006620 ORTHO05D008921 6.8e-184 648.3 421 72.0
CANSAT78G1778 Cannabis sativa HOM05D006620 ORTHO05D008921 8.9e-184 647.9 446 68.8
Hma1.2p1_1241F.1_g269780 Hydrangea macrophylla HOM05D006620 ORTHO05D008921 1.2e-183 647.5 421 71.5
Phvul.007G238800 Phaseolus vulgaris HOM05D006620 ORTHO05D008921 1.2e-183 647.5 421 72.0
VMungo0720G1672 Vigna mungo HOM05D006620 ORTHO05D008921 2.0e-183 646.7 421 71.0
arahy.Tifrunner.gnm1.ann1.8GH2US Arachis hypogaea HOM05D006620 ORTHO05D008921 2.6e-183 646.4 424 71.7
Cc03_g07000 Coffea canephora HOM05D006620 ORTHO05D008921 2.6e-183 646.4 420 71.7
MD13G1227100 Malus domestica HOM05D006620 ORTHO05D008921 5.8e-183 645.2 421 71.5
THA.LOC104801056 Tarenaya hassleriana HOM05D006620 ORTHO05D008921 5.8e-183 645.2 459 66.4
Thecc.04G218300 Theobroma cacao HOM05D006620 ORTHO05D008921 7.6e-183 644.8 420 71.4
QL06p022330 Quercus lobata HOM05D006620 ORTHO05D008921 9.9e-183 644.4 454 67.4
SalBow2G2385 Salvia bowleyana HOM05D006620 ORTHO05D008921 9.9e-183 644.4 445 69.0
HanXRQChr07g0185841 Helianthus annuus HOM05D006620 ORTHO05D008921 2.9e-182 642.9 421 72.4
Nn1g03061 Nelumbo nucifera HOM05D006620 ORTHO05D008921 1.1e-181 641.0 421 71.5
Oeu024839.2 Olea europaea HOM05D006620 ORTHO05D008921 1.1e-181 641.0 421 71.0
FAN07G1877 Fragaria x ananassa HOM05D006620 ORTHO05D008921 1.4e-181 640.6 421 70.8
PGR142G1067 Punica granatum HOM05D006620 ORTHO05D008921 1.4e-181 640.6 420 71.4
Duzib151G1212 Durio zibethinus HOM05D006620 ORTHO05D008921 3.2e-181 639.4 420 70.5
Gohir.A10G119800 Gossypium hirsutum HOM05D006620 ORTHO05D008921 3.2e-181 639.4 420 70.5
Gohir.D10G146800 Gossypium hirsutum HOM05D006620 ORTHO05D008921 3.2e-181 639.4 420 70.7
SEGI_36405 Sequoiadendron giganteum HOM05D006620 ORTHO05D008921 3.2e-181 639.4 420 71.2
Migut.G00599 Erythranthe guttata HOM05D006620 ORTHO05D008921 5.4e-181 638.6 451 67.6
TWI53G1958 Tripterygium wilfordii HOM05D006620 ORTHO05D008921 1.2e-180 637.5 421 71.3
HPP92_009009 Vanilla planifolia HOM05D006620 ORTHO05D008921 1.6e-180 637.1 450 66.7
DCAR_002286 Daucus carota HOM05D006620 ORTHO05D008921 2.1e-180 636.7 448 68.5
Zm00001eb038650 Zea mays HOM05D006620 ORTHO05D008921 2.1e-180 636.7 420 70.7
ATR0787G041 Amborella trichopoda HOM05D006620 ORTHO05D008921 6.0e-180 635.2 441 68.0
Lsat_1_v5_gn_6_61660 Lactuca sativa HOM05D006620 ORTHO05D008921 7.8e-180 634.8 422 70.6
unitig_899.g14858 Utricularia gibba HOM05D006620 ORTHO05D008921 1.0e-179 634.4 461 65.9
ECA233G0386 Erigeron canadensis HOM05D006620 ORTHO05D008921 3.0e-179 632.9 414 71.7
PSO832G4215 Papaver somniferum HOM05D006620 ORTHO05D008921 3.9e-179 632.5 425 70.1
arahy.Tifrunner.gnm1.ann1.68MQ8I Arachis hypogaea HOM05D006620 ORTHO05D008921 5.1e-179 632.1 442 68.6
CAN.G812.44 Capsicum annuum HOM05D006620 ORTHO05D008921 5.1e-179 632.1 421 70.3
Thhalv10007576m.g Eutrema salsugineum HOM05D006620 ORTHO05D008921 6.6e-179 631.7 421 70.3
Sp1g03450 Schrenkiella parvula HOM05D006620 ORTHO05D008921 6.6e-179 631.7 421 70.3
SpUn0217_0010 Schrenkiella parvula HOM05D006620 ORTHO05D008921 6.6e-179 631.7 421 70.3
Sopen09g034080 Solanum pennellii HOM05D006620 ORTHO05D008921 1.9e-178 630.2 421 70.1
BolC5t29064H Brassica oleracea HOM05D006620 ORTHO05D008921 4.3e-178 629.0 421 70.1
CARHR003970 Cardamine hirsuta HOM05D006620 ORTHO05D008921 4.3e-178 629.0 421 70.1
AT1G04620 Arabidopsis thaliana HOM05D006620 ORTHO05D008921 5.6e-178 628.6 421 69.8
Carub.0001s0385 Capsella rubella HOM05D006620 ORTHO05D008921 7.3e-178 628.2 421 70.1
C05p02810 Brassica napus HOM05D006620 ORTHO05D008921 9.6e-178 627.9 421 69.8
CDE09G0604 Ceratophyllum demersum HOM05D006620 ORTHO05D008921 1.3e-177 627.5 413 71.2
A10p03050 Brassica napus HOM05D006620 ORTHO05D008921 1.1e-176 624.4 421 69.6
AL1G14300 Arabidopsis lyrata HOM05D006620 ORTHO05D008921 1.8e-176 623.6 421 69.6
BraA10t42578Z Brassica rapa HOM05D006620 ORTHO05D008921 1.8e-176 623.6 421 69.4
Lj3A630T51 Lonicera japonica HOM05D006620 ORTHO05D008921 2.9e-174 616.3 421 69.4
Gorai.011G164100 Gossypium raimondii HOM05D006620 ORTHO05D008921 1.1e-173 614.4 446 65.5
MBI07_g21064_MAGBIO Magnolia biondii HOM05D006620 ORTHO05D008921 1.7e-171 607.1 400 72.0
COL.COLO4_34324 Corchorus olitorius HOM05D006620 ORTHO05D008921 3.1e-168 596.3 438 65.3
Peaxi162Scf00125g00710 Petunia axillaris HOM05D006620 ORTHO05D008921 3.1e-168 596.3 400 70.5
AUR62043860 Chenopodium quinoa HOM05D006620 ORTHO05D008921 2.6e-167 593.2 421 65.8
Hund19263 Selenicereus undatus HOM05D006620 ORTHO05D008921 3.4e-167 592.8 424 67.0
FAN22G0814 Fragaria x ananassa HOM05D006620 ORTHO05D008921 6.0e-164 582.0 471 61.1
Ah.04g153440 Amaranthus hybridus HOM05D006620 ORTHO05D008921 1.3e-163 580.9 421 65.3
Cre11.g468700 Chlamydomonas reinhardtii HOM05D006620 ORTHO05D008921 1.9e-162 577.0 423 66.2
vmacro00524 Vaccinium macrocarpon HOM05D006620 ORTHO05D008921 1.6e-161 573.9 483 59.8
Rhsim09G0044600 Rhododendron simsii HOM05D006620 ORTHO05D008921 2.4e-160 570.1 436 64.9
MCO15G577 Micromonas commoda HOM05D006620 ORTHO05D008921 1.0e-158 564.7 439 62.4
AUR62035902 Chenopodium quinoa HOM05D006620 ORTHO05D008921 1.2e-156 557.8 422 63.3
Solyc09g091100.4 Solanum lycopersicum HOM05D006620 ORTHO05D008921 3.5e-156 556.2 381 69.8
Cfa014839 Carpinus fangiana HOM05D006620 ORTHO05D008921 1.3e-153 547.7 363 71.9
Nitab4.5_0003287g0030 Nicotiana tabacum HOM05D006620 ORTHO05D008921 1.4e-152 544.3 456 60.5
EL10Ac3g06742 Beta vulgaris HOM05D006620 ORTHO05D008921 2.4e-152 543.5 445 60.0
Sabra10G0044300 Salix brachista HOM05D006620 ORTHO05D008921 3.1e-152 543.1 549 51.5
Glyma.20G079901 Glycine max HOM05D006620 ORTHO05D008921 2.0e-151 540.4 354 71.2
Sc25g0004890 Simmondsia chinensis HOM05D006620 ORTHO05D008921 4.5e-151 539.3 363 70.0
Aa31LG1G20250 Aethionema arabicum HOM05D006620 ORTHO05D008921 7.2e-149 531.9 383 67.1
AUR62035337 Chenopodium quinoa HOM05D006620 ORTHO05D008921 7.2e-141 505.4 446 56.7
Ca_11784_v3 Cicer arietinum L. HOM05D006620 ORTHO05D008921 9.4e-133 478.4 376 62.8
PRCOL_00000047 Prasinoderma coloniale HOM05D006620 ORTHO05D008921 8.8e-131 471.9 378 61.9
Cc03_g06790 Coffea canephora HOM05D006620 ORTHO05D008921 1.5e-130 471.1 479 53.4
Os04g0320100 Oryza sativa ssp. japonica HOM05D006620 ORTHO05D008921 2.0e-119 434.1 300 69.7
Haze_11525 Corylus avellana HOM05D006620 ORTHO05D008921 1.5e-117 427.9 260 76.2
Psat6g109520 Pisum sativum HOM05D006620 ORTHO05D008921 9.4e-117 425.2 271 73.4
Nitab4.5_0000451g0130 Nicotiana tabacum HOM05D006620 ORTHO05D008921 5.6e-101 372.9 421 48.2
Eucgr.H00112 Eucalyptus grandis HOM05D006620 ORTHO05D008921 2.4e-96 357.5 249 68.3
Prupe.1G054400 Prunus persica HOM05D006620 ORTHO05D008921 1.5e-50 205.3 186 55.9
SEGI_09547 Sequoiadendron giganteum HOM05D006620 ORTHO05D008921 6.4e-49 199.9 144 65.3
PGSC0003DMG401011586 Solanum tuberosum HOM05D006620 ORTHO05D008921 3.0e-46 191.0 145 62.8
Hma1.2p1_1241F.1_g269765 Hydrangea macrophylla HOM05D006620 ORTHO05D008921 3.7e-28 131.0 86 65.1
SEGI_19589 Sequoiadendron giganteum HOM05D006620 ORTHO05D025789 1.5e-21 109.0 80 65.0
Actinidia35928 Actinidia chinensis HOM05D006620 ORTHO05D000073 3.8e-17 94.4 69 66.7
Ca_17765_v3 Cicer arietinum L. HOM05D006620 ORTHO05D044367 1.1e-16 92.8 57 70.2
COL.COLO4_07239 Corchorus olitorius HOM05D006620 ORTHO05D044367 1.2e-10 72.8 49 63.3
MBI12_g00604_MAGBIO Magnolia biondii HOM05D006620 ORTHO05D025789 1.1e-08 66.2 42 71.4
MBI15_g44046_MAGBIO Magnolia biondii HOM05D006620 ORTHO05D025789 1.1e-08 66.2 42 71.4
MBI11_g39495_MAGBIO Magnolia biondii HOM05D006620 ORTHO05D025789 1.5e-08 65.9 44 68.2
MELO3C028457.2 Cucumis melo HOM05D006620 ORTHO05D167913 6.7e-06 57.0 40 67.5


User provided reference genes

Program Settings