Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CBR_g51476 Chara braunii HOM05D007606 ORTHO05D009600 4.2e-85 318.9 307 100.0
SMO358G0723 Selaginella moellendorffii HOM05D007606 ORTHO05D009600 1.2e-18 98.2 98 58.2
Mapoly0026s0023 Marchantia polymorpha HOM05D007606 ORTHO05D009600 1.5e-18 97.8 70 70.0
Pp3c7_10050 Physcomitrium patens HOM05D007606 ORTHO05D009600 1.5e-18 97.8 69 71.0
AagrBONN_evm.TU.Sc2ySwM_362.441 Anthoceros agrestis HOM05D007606 ORTHO05D009600 2.0e-18 97.4 57 80.7
Prupe.1G084400 Prunus persica HOM05D007606 ORTHO05D009600 2.6e-18 97.1 66 72.7
CARHR271170 Cardamine hirsuta HOM05D007606 ORTHO05D009600 7.5e-18 95.5 69 71.0
Sopen07g006820 Solanum pennellii HOM05D007606 ORTHO05D009600 1.3e-17 94.7 62 77.4
MD16G1256400 Malus domestica HOM05D007606 ORTHO05D009600 1.7e-17 94.4 62 75.8
Actinidia01312 Actinidia chinensis HOM05D007606 ORTHO05D009600 2.2e-17 94.0 74 67.6
AT5G57370 Arabidopsis thaliana HOM05D007606 ORTHO05D009600 2.2e-17 94.0 67 71.6
PGSC0003DMG400004088 Solanum tuberosum HOM05D007606 ORTHO05D009600 2.2e-17 94.0 67 71.6
CAN.G321.18 Capsicum annuum HOM05D007606 ORTHO05D009600 2.9e-17 93.6 62 77.4
Migut.J01493 Erythranthe guttata HOM05D007606 ORTHO05D009600 2.9e-17 93.6 76 67.1
SGA_v2.0_scaffold66G22417 Striga asiatica HOM05D007606 ORTHO05D009600 3.7e-17 93.2 66 72.7
Carub.0008s1789 Capsella rubella HOM05D007606 ORTHO05D009600 4.9e-17 92.8 66 69.7
Cpa.g.sc523.4 Carica papaya HOM05D007606 ORTHO05D009600 4.9e-17 92.8 62 74.2
FvH4_4g07990 Fragaria vesca HOM05D007606 ORTHO05D009600 4.9e-17 92.8 62 74.2
FAN17G2268 Fragaria x ananassa HOM05D007606 ORTHO05D009600 4.9e-17 92.8 62 74.2
Glyma.13G097200 Glycine max HOM05D007606 ORTHO05D009600 4.9e-17 92.8 62 72.6
Potri.018G091300 Populus trichocarpa HOM05D007606 ORTHO05D009600 4.9e-17 92.8 62 74.2
Atru.chr7.594 Acer truncatum HOM05D007606 ORTHO05D009600 6.4e-17 92.4 62 72.6
Glyma.17G062400 Glycine max HOM05D007606 ORTHO05D009600 6.4e-17 92.4 80 61.2
Os02g0461600 Oryza sativa ssp. japonica HOM05D007606 ORTHO05D009600 6.4e-17 92.4 70 70.0
RcHm_v2.0_Chr4g0401721 Rosa chinensis HOM05D007606 ORTHO05D009600 6.4e-17 92.4 62 72.6
Sed0005573 Sechium edule HOM05D007606 ORTHO05D009600 6.4e-17 92.4 82 61.0
AL8G33350 Arabidopsis lyrata HOM05D007606 ORTHO05D009600 8.3e-17 92.0 66 68.2
BcaC03g14159 Brassica carinata HOM05D007606 ORTHO05D009600 8.3e-17 92.0 68 69.1
Eucgr.C02351 Eucalyptus grandis HOM05D007606 ORTHO05D009600 8.3e-17 92.0 63 74.6
Manes.14G154600 Manihot esculenta HOM05D007606 ORTHO05D009600 8.3e-17 92.0 71 67.6
QL02p097943 Quercus lobata HOM05D007606 ORTHO05D009600 8.3e-17 92.0 67 68.7
BcaB05g22341 Brassica carinata HOM05D007606 ORTHO05D009600 1.1e-16 91.7 67 68.7
A10p14850 Brassica napus HOM05D007606 ORTHO05D009600 1.1e-16 91.7 58 75.9
BraA10t43563Z Brassica rapa HOM05D007606 ORTHO05D009600 1.1e-16 91.7 58 75.9
CSS0005882 Camellia sinensis var. sinensis HOM05D007606 ORTHO05D009600 1.1e-16 91.7 65 72.3
CiPaw.07G193100 Carya illinoinensis HOM05D007606 ORTHO05D009600 1.1e-16 91.7 62 72.6
MD13G1252200 Malus domestica HOM05D007606 ORTHO05D009600 1.1e-16 91.7 62 72.6
PSO063G2142 Papaver somniferum HOM05D007606 ORTHO05D009600 1.1e-16 91.7 83 57.8
HPP92_010764 Vanilla planifolia HOM05D007606 ORTHO05D009600 1.1e-16 91.7 84 61.9
MSTRG.6226 Avicennia marina HOM05D007606 ORTHO05D009600 1.4e-16 91.3 65 72.3
A02p08550 Brassica napus HOM05D007606 ORTHO05D009600 1.4e-16 91.3 92 55.4
CANSAT11G0497 Cannabis sativa HOM05D007606 ORTHO05D009600 1.4e-16 91.3 66 68.2
Ciclev10009582m.g Citrus clementina HOM05D007606 ORTHO05D009600 1.4e-16 91.3 65 70.8
MELO3C017454.2 Cucumis melo HOM05D007606 ORTHO05D009600 1.4e-16 91.3 80 62.5
CsaV3_1G031690 Cucumis sativus L. HOM05D007606 ORTHO05D009600 1.4e-16 91.3 62 72.6
FAN07G2281 Fragaria x ananassa HOM05D007606 ORTHO05D009600 1.4e-16 91.3 62 72.6
Nitab4.5_0000055g0310 Nicotiana tabacum HOM05D007606 ORTHO05D009600 1.4e-16 91.3 58 77.6
Phvul.003G144300 Phaseolus vulgaris HOM05D007606 ORTHO05D009600 1.4e-16 91.3 58 75.9
Sabra18G0078500 Salix brachista HOM05D007606 ORTHO05D009600 1.4e-16 91.3 62 71.0
Sc18g0007510 Simmondsia chinensis HOM05D007606 ORTHO05D009600 1.4e-16 91.3 62 72.6
C02p14290 Brassica napus HOM05D007606 ORTHO05D009600 2.4e-16 90.5 66 68.2
BraA02t05924Z Brassica rapa HOM05D007606 ORTHO05D009600 2.4e-16 90.5 66 68.2
Sp6g19090 Schrenkiella parvula HOM05D007606 ORTHO05D009600 2.4e-16 90.5 66 68.2
BcaC04g19971 Brassica carinata HOM05D007606 ORTHO05D009600 3.2e-16 90.1 66 66.7
C09p49270 Brassica napus HOM05D007606 ORTHO05D009600 3.2e-16 90.1 66 66.7
BolC9t57778H Brassica oleracea HOM05D007606 ORTHO05D009600 3.2e-16 90.1 66 66.7
Oeu025687.1 Olea europaea HOM05D007606 ORTHO05D009600 3.2e-16 90.1 62 74.2
Hund26341 Selenicereus undatus HOM05D007606 ORTHO05D009600 3.2e-16 90.1 61 72.1
Zm00001eb327770 Zea mays HOM05D007606 ORTHO05D009600 3.2e-16 90.1 58 74.1
Aa31LG3G13250 Aethionema arabicum HOM05D007606 ORTHO05D009600 4.1e-16 89.7 66 66.7
TAR383G0717 Trochodendron aralioides HOM05D007606 ORTHO05D009600 4.1e-16 89.7 69 68.1
BolC2t07555H Brassica oleracea HOM05D007606 ORTHO05D009600 5.4e-16 89.4 102 51.0
Medtr4g127860 Medicago truncatula HOM05D007606 ORTHO05D009600 5.4e-16 89.4 62 71.0
Cc06_g13140 Coffea canephora HOM05D007606 ORTHO05D009600 7.0e-16 89.0 89 59.6
COL.COLO4_37736 Corchorus olitorius HOM05D007606 ORTHO05D009600 7.0e-16 89.0 62 69.4
Psat4g012880 Pisum sativum HOM05D007606 ORTHO05D009600 9.2e-16 88.6 62 69.4
THA.LOC104813519 Tarenaya hassleriana HOM05D007606 ORTHO05D009600 9.2e-16 88.6 91 56.0
EL10Ac8g18293 Beta vulgaris HOM05D007606 ORTHO05D009600 1.2e-15 88.2 63 71.4
Hma1.2p1_1025F.1_g249400 Hydrangea macrophylla HOM05D007606 ORTHO05D009600 1.6e-15 87.8 62 69.4
Gohir.D08G193500 Gossypium hirsutum HOM05D007606 ORTHO05D009600 2.0e-15 87.4 65 66.2
Gorai.004G203800 Gossypium raimondii HOM05D007606 ORTHO05D009600 2.0e-15 87.4 65 66.2
Rhsim03G0264900 Rhododendron simsii HOM05D007606 ORTHO05D009600 2.0e-15 87.4 65 67.7
Duzib168G1965 Durio zibethinus HOM05D007606 ORTHO05D009600 2.7e-15 87.0 56 75.0
Lsat_1_v5_gn_8_67821 Lactuca sativa HOM05D007606 ORTHO05D009600 2.7e-15 87.0 83 59.0
Lalb_Chr13g0300161 Lupinus albus HOM05D007606 ORTHO05D009600 2.7e-15 87.0 55 76.4
Aqoxy7G03025 Aquilegia oxysepala HOM05D007606 ORTHO05D009600 3.5e-15 86.7 91 52.7
Nn5g27171 Nelumbo nucifera HOM05D007606 ORTHO05D009600 4.6e-15 86.3 89 53.9
SEGI_36552 Sequoiadendron giganteum HOM05D007606 ORTHO05D009600 4.6e-15 86.3 58 72.4
Gohir.A08G174900 Gossypium hirsutum HOM05D007606 ORTHO05D009600 1.0e-14 85.1 58 70.7
PSO339G0750 Papaver somniferum HOM05D007606 ORTHO05D009600 1.0e-14 85.1 56 71.4
SHI02893 Sapria himalayana HOM05D007606 ORTHO05D009600 1.3e-14 84.7 61 65.6
GSVIVG01029223001 Vitis vinifera HOM05D007606 ORTHO05D009600 1.3e-14 84.7 65 70.8
Lj5P601T23 Lonicera japonica HOM05D007606 ORTHO05D009600 1.7e-14 84.3 62 66.1
Thecc.09G175900 Theobroma cacao HOM05D007606 ORTHO05D009600 1.7e-14 84.3 56 73.2
HanXRQChr12g0365451 Helianthus annuus HOM05D007606 ORTHO05D009600 2.3e-14 84.0 61 67.2
Ca_21234_v3 Cicer arietinum L. HOM05D007606 ORTHO05D009600 5.0e-14 82.8 51 78.4
TWI32G0742 Tripterygium wilfordii HOM05D007606 ORTHO05D009600 5.0e-14 82.8 67 64.2
Ah.09g229950 Amaranthus hybridus HOM05D007606 ORTHO05D009600 8.6e-14 82.0 98 50.0
AUR62021308 Chenopodium quinoa HOM05D007606 ORTHO05D009600 8.6e-14 82.0 51 78.4
BcaB08g36096 Brassica carinata HOM05D007606 ORTHO05D009600 1.2e-12 78.2 58 70.7
HanXRQChr08g0212621 Helianthus annuus HOM05D007606 ORTHO05D009600 1.8e-11 74.3 81 54.3
FAN12G2299 Fragaria x ananassa HOM05D007606 ORTHO05D009600 8.3e-09 65.5 48 66.7
arahy.Tifrunner.gnm1.ann1.TB3R4X Arachis hypogaea HOM05D007606 ORTHO05D009600 1.1e-08 65.1 60 56.7
FAN22G0657 Fragaria x ananassa HOM05D007606 ORTHO05D009600 2.4e-08 63.9 50 66.0
Cre10.g465950 Chlamydomonas reinhardtii HOM05D007606 ORTHO05D009600 9.2e-08 62.0 93 43.0


User provided reference genes

Program Settings