Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CBR_g50381 Chara braunii HOM05D002306 ORTHO05D006484 5.8e-71 270.8 137 100.0
ClCG05G009020 Citrullus lanatus HOM05D002306 ORTHO05D006484 5.9e-15 84.7 89 50.6
Sed0012841 Sechium edule HOM05D002306 ORTHO05D006484 7.7e-15 84.3 81 51.9
AagrBONN_evm.TU.Sc2ySwM_228.5884 Anthoceros agrestis HOM05D002306 ORTHO05D006484 1.3e-14 83.6 76 55.3
MELO3C008504.2 Cucumis melo HOM05D002306 ORTHO05D006484 1.7e-14 83.2 89 49.4
Mapoly0129s0038 Marchantia polymorpha HOM05D002306 ORTHO05D006484 2.2e-14 82.8 79 53.2
Oeu037053.1 Olea europaea HOM05D002306 ORTHO05D006484 2.2e-14 82.8 83 49.4
Psat5g075320 Pisum sativum HOM05D002306 ORTHO05D006484 2.2e-14 82.8 85 50.6
TWI39G0647 Tripterygium wilfordii HOM05D002306 ORTHO05D006484 5.0e-14 81.6 83 48.2
FAN10G3342 Fragaria x ananassa HOM05D002306 ORTHO05D006484 8.5e-14 80.9 83 49.4
Pp3c15_21670 Physcomitrium patens HOM05D002306 ORTHO05D006484 8.5e-14 80.9 82 51.2
Lalb_Chr11g0066981 Lupinus albus HOM05D002306 ORTHO05D006484 1.1e-13 80.5 83 45.8
AagrBONN_evm.TU.Sc2ySwM_228.5887 Anthoceros agrestis HOM05D002306 ORTHO05D006484 1.5e-13 80.1 75 54.7
CANSAT21G2118 Cannabis sativa HOM05D002306 ORTHO05D006484 1.5e-13 80.1 78 52.6
CDE11G0760 Ceratophyllum demersum HOM05D002306 ORTHO05D006484 1.5e-13 80.1 86 45.3
PSO170G5717 Papaver somniferum HOM05D002306 ORTHO05D006484 1.5e-13 80.1 78 53.8
vmacro10128 Vaccinium macrocarpon HOM05D002306 ORTHO05D006484 1.5e-13 80.1 78 52.6
CsaV3_3G019760 Cucumis sativus L. HOM05D002306 ORTHO05D006484 1.9e-13 79.7 83 48.2
Dinv29265 Davidia involucrata HOM05D002306 ORTHO05D006484 1.9e-13 79.7 80 50.0
PSO135G0367 Papaver somniferum HOM05D002306 ORTHO05D006484 1.9e-13 79.7 78 52.6
Lsat_1_v5_gn_8_5361 Lactuca sativa HOM05D002306 ORTHO05D006484 2.5e-13 79.3 78 52.6
PSO384G3554 Papaver somniferum HOM05D002306 ORTHO05D006484 2.5e-13 79.3 78 52.6
QL09p008635 Quercus lobata HOM05D002306 ORTHO05D006484 2.5e-13 79.3 90 45.6
Aqoxy5G04246 Aquilegia oxysepala HOM05D002306 ORTHO05D006484 3.2e-13 79.0 86 46.5
CAN.G481.25 Capsicum annuum HOM05D002306 ORTHO05D006484 3.2e-13 79.0 86 46.5
MD01G1222500 Malus domestica HOM05D002306 ORTHO05D006484 4.2e-13 78.6 83 45.8
MD07G1293100 Malus domestica HOM05D002306 ORTHO05D006484 4.2e-13 78.6 83 45.8
PGR042G2650 Punica granatum HOM05D002306 ORTHO05D006484 4.2e-13 78.6 80 51.2
Thecc.03G200700 Theobroma cacao HOM05D002306 ORTHO05D006484 4.2e-13 78.6 90 44.4
COL.COLO4_16787 Corchorus olitorius HOM05D002306 ORTHO05D006484 5.5e-13 78.2 90 43.3
Eucgr.K00393 Eucalyptus grandis HOM05D002306 ORTHO05D006484 5.5e-13 78.2 79 50.6
Nn3g18952 Nelumbo nucifera HOM05D002306 ORTHO05D006484 5.5e-13 78.2 88 44.3
Haze_00198 Corylus avellana HOM05D002306 ORTHO05D005773 7.2e-13 77.8 90 45.6
Nn8g40946 Nelumbo nucifera HOM05D002306 ORTHO05D006484 7.2e-13 77.8 91 46.2
Solyc03g083020.3 Solanum lycopersicum HOM05D002306 ORTHO05D006484 7.2e-13 77.8 88 44.3
Sopen03g022830 Solanum pennellii HOM05D002306 ORTHO05D006484 7.2e-13 77.8 88 44.3
CSS0043540 Camellia sinensis var. sinensis HOM05D002306 ORTHO05D006484 9.4e-13 77.4 77 50.6
FvH4_7g31970 Fragaria vesca HOM05D002306 ORTHO05D006484 9.4e-13 77.4 79 53.2
Phvul.001G057400 Phaseolus vulgaris HOM05D002306 ORTHO05D006484 9.4e-13 77.4 88 44.3
Potri.015G011500 Populus trichocarpa HOM05D002306 ORTHO05D006484 9.4e-13 77.4 83 45.8
SMO351G0263 Selaginella moellendorffii HOM05D002306 ORTHO05D006484 9.4e-13 77.4 78 51.3
ECA233G2756 Erigeron canadensis HOM05D002476 ORTHO05D006484 1.2e-12 77.0 78 52.6
Prupe.2G312900 Prunus persica HOM05D002306 ORTHO05D006484 1.2e-12 77.0 83 47.0
Actinidia08660 Actinidia chinensis HOM05D002306 ORTHO05D006484 1.6e-12 76.6 78 51.3
FAN10G1840 Fragaria x ananassa HOM05D002306 ORTHO05D006484 1.6e-12 76.6 83 48.2
Lj6g0020019 Lotus japonicus HOM05D002306 ORTHO05D006484 1.6e-12 76.6 81 48.1
PGSC0003DMG402018530 Solanum tuberosum HOM05D002306 ORTHO05D006484 1.6e-12 76.6 86 45.3
Aa31LG3G9430 Aethionema arabicum HOM05D002306 ORTHO05D006484 2.1e-12 76.3 77 50.6
MSTRG.8645 Avicennia marina HOM05D002306 ORTHO05D006484 2.1e-12 76.3 81 48.1
Cfa016242 Carpinus fangiana HOM05D002306 ORTHO05D006484 2.1e-12 76.3 85 47.1
MBI07_g24774_MAGBIO Magnolia biondii HOM05D002306 ORTHO05D006484 2.1e-12 76.3 81 45.7
RcHm_v2.0_Chr1g0381471 Rosa chinensis HOM05D002306 ORTHO05D006484 2.1e-12 76.3 83 47.0
vmacro06392 Vaccinium macrocarpon HOM05D002306 ORTHO05D006484 2.1e-12 76.3 78 50.0
GSVIVG01038565001 Vitis vinifera HOM05D002306 ORTHO05D006484 2.1e-12 76.3 78 50.0
A10p10530 Brassica napus HOM05D002306 ORTHO05D006484 2.7e-12 75.9 78 51.3
BraA10t43137Z Brassica rapa HOM05D002306 ORTHO05D006484 2.7e-12 75.9 78 51.3
Medtr3g091850 Medicago truncatula HOM05D002306 ORTHO05D006484 2.7e-12 75.9 83 47.0
Ah.07g205530 Amaranthus hybridus HOM05D002306 ORTHO05D006484 3.6e-12 75.5 83 48.2
BcaC04g20513 Brassica carinata HOM05D002306 ORTHO05D006484 3.6e-12 75.5 78 51.3
C09p42750 Brassica napus HOM05D002306 ORTHO05D006484 3.6e-12 75.5 78 51.3
BolC9t57151H Brassica oleracea HOM05D002306 ORTHO05D006484 3.6e-12 75.5 78 51.3
PSO782G0677 Papaver somniferum HOM05D002306 ORTHO05D006484 3.6e-12 75.5 78 51.3
Hund11652 Selenicereus undatus HOM05D002306 ORTHO05D006484 3.6e-12 75.5 88 45.5
TPR.G33626 Trifolium pratense HOM05D002306 ORTHO05D006484 3.6e-12 75.5 83 47.0
Aqoxy3G03743 Aquilegia oxysepala HOM05D002306 ORTHO05D006484 4.7e-12 75.1 78 47.4
Ciclev10023672m.g Citrus clementina HOM05D002306 ORTHO05D006484 4.7e-12 75.1 86 45.3
Duzib084G1054 Durio zibethinus HOM05D002306 ORTHO05D006484 4.7e-12 75.1 83 43.4
Manes.05G190300 Manihot esculenta HOM05D002306 ORTHO05D006484 4.7e-12 75.1 84 42.9
Ciclev10024526m.g Citrus clementina HOM05D002306 ORTHO05D006484 6.1e-12 74.7 87 48.3
Glyma.11G174073 Glycine max HOM05D002306 ORTHO05D006484 6.1e-12 74.7 81 46.9
Glyma.17G200500 Glycine max HOM05D002306 ORTHO05D006484 6.1e-12 74.7 81 46.9
SGA_v2.0_scaffold44G16812 Striga asiatica HOM05D002306 ORTHO05D005773 6.1e-12 74.7 82 46.3
TWI14G0402 Tripterygium wilfordii HOM05D002306 ORTHO05D006484 6.1e-12 74.7 79 50.6
FAN06G3491 Fragaria x ananassa HOM05D002306 ORTHO05D006484 8.0e-12 74.3 72 54.2
Atru.chr1.2784 Acer truncatum HOM05D002306 ORTHO05D006484 1.0e-11 73.9 78 48.7
AL8G27670 Arabidopsis lyrata HOM05D002306 ORTHO05D006484 1.0e-11 73.9 83 47.0
Migut.F00201 Erythranthe guttata HOM05D002306 ORTHO05D006484 1.0e-11 73.9 81 46.9
unitig_8.g4777 Utricularia gibba HOM05D002306 ORTHO05D006484 1.0e-11 73.9 80 48.8
AT5G53045 Arabidopsis thaliana HOM05D002306 ORTHO05D006484 1.4e-11 73.6 83 45.8
BcaB08g35664 Brassica carinata HOM05D002306 ORTHO05D006484 1.4e-11 73.6 78 50.0
Carub.0008s1324 Capsella rubella HOM05D002306 ORTHO05D006484 1.4e-11 73.6 83 45.8
Sabra12G0015400 Salix brachista HOM05D002306 ORTHO05D006484 1.4e-11 73.6 83 43.4
HPP92_020719 Vanilla planifolia HOM05D002306 ORTHO05D006484 1.4e-11 73.6 78 46.2
Gohir.A09G184900 Gossypium hirsutum HOM05D002306 ORTHO05D006484 1.8e-11 73.2 90 40.0
Sp6g15200 Schrenkiella parvula HOM05D002306 ORTHO05D006484 1.8e-11 73.2 78 48.7
ECA232G1226 Erigeron canadensis HOM05D002306 ORTHO05D006484 2.3e-11 72.8 81 46.9
Thhalv10022935m.g Eutrema salsugineum HOM05D002306 ORTHO05D006484 2.3e-11 72.8 78 48.7
Os02g0305800 Oryza sativa ssp. japonica HOM05D002306 ORTHO05D006484 2.3e-11 72.8 78 44.9
Rhsim03G0209800 Rhododendron simsii HOM05D002306 ORTHO05D006484 2.3e-11 72.8 74 51.4
Rhsim03G0210000 Rhododendron simsii HOM05D002306 ORTHO05D006484 2.3e-11 72.8 74 51.4
Rhsim03G0210100 Rhododendron simsii HOM05D002306 ORTHO05D006484 2.3e-11 72.8 74 51.4
ATR0602G202 Amborella trichopoda HOM05D002306 ORTHO05D006484 3.0e-11 72.4 81 44.4
A03p15460 Brassica napus HOM05D002306 ORTHO05D006484 4.0e-11 72.0 78 46.2
BraA03t10836Z Brassica rapa HOM05D002306 ORTHO05D006484 4.0e-11 72.0 78 46.2
BraA03t10838Z Brassica rapa HOM05D002306 ORTHO05D006484 4.0e-11 72.0 78 46.2
BraA03t10841Z Brassica rapa HOM05D002306 ORTHO05D006484 4.0e-11 72.0 78 46.2
CARHR266060 Cardamine hirsuta HOM05D002306 ORTHO05D006484 4.0e-11 72.0 83 45.8
Gohir.D09G179800 Gossypium hirsutum HOM05D002306 ORTHO05D006484 4.0e-11 72.0 90 41.1
Medtr1g007870 Medicago truncatula HOM05D002306 ORTHO05D006484 4.0e-11 72.0 83 45.8
arahy.Tifrunner.gnm1.ann1.84THGE Arachis hypogaea HOM05D002306 ORTHO05D006484 5.2e-11 71.6 81 45.7
arahy.Tifrunner.gnm1.ann1.K9F3KZ Arachis hypogaea HOM05D002306 ORTHO05D006484 5.2e-11 71.6 81 45.7
Cc02_g01390 Coffea canephora HOM05D002306 ORTHO05D006484 5.2e-11 71.6 80 46.2
Thhalv10015123m.g Eutrema salsugineum HOM05D002306 ORTHO05D006484 5.2e-11 71.6 78 48.7
Gorai.006G201800 Gossypium raimondii HOM05D002306 ORTHO05D006484 5.2e-11 71.6 82 43.9
BcaC01g06216 Brassica carinata HOM05D002306 ORTHO05D006484 6.8e-11 71.2 77 46.8
A03p15430 Brassica napus HOM05D002306 ORTHO05D006484 6.8e-11 71.2 78 46.2
C03p18020 Brassica napus HOM05D002306 ORTHO05D006484 6.8e-11 71.2 77 46.8
BolC3t14207H Brassica oleracea HOM05D002306 ORTHO05D006484 6.8e-11 71.2 77 46.8
BraA03t10832Z Brassica rapa HOM05D002306 ORTHO05D006484 6.8e-11 71.2 78 46.2
BraA03t10833Z Brassica rapa HOM05D002306 ORTHO05D006484 6.8e-11 71.2 78 46.2
Ciclev10023496m.g Citrus clementina HOM05D002306 ORTHO05D006484 6.8e-11 71.2 87 46.0
Psat6g034920 Pisum sativum HOM05D002306 ORTHO05D006484 6.8e-11 71.2 72 54.2
Sabra15G0009400 Salix brachista HOM05D002306 ORTHO05D006484 6.8e-11 71.2 74 47.3
Sc13g0009850 Simmondsia chinensis HOM05D002306 ORTHO05D006484 8.8e-11 70.9 80 45.0
arahy.Tifrunner.gnm1.ann1.CGD4UQ Arachis hypogaea HOM05D002306 ORTHO05D006484 1.2e-10 70.5 86 43.0
VMungo0647G0954 Vigna mungo HOM05D002306 ORTHO05D006484 1.2e-10 70.5 77 49.4
TPR.G12084 Trifolium pratense HOM05D002306 ORTHO05D006484 1.5e-10 70.1 83 45.8
CiPaw.05G197900 Carya illinoinensis HOM05D002306 ORTHO05D006484 2.6e-10 69.3 72 51.4
ATR1127G174 Amborella trichopoda HOM05D002306 ORTHO05D006484 3.4e-10 68.9 81 43.2
AUR62006081 Chenopodium quinoa HOM05D002306 ORTHO05D006484 4.4e-10 68.6 83 45.8
Peaxi162Scf00740g00131 Petunia axillaris HOM05D002306 ORTHO05D006484 5.7e-10 68.2 78 43.6
THA.LOC104825151 Tarenaya hassleriana HOM05D002306 ORTHO05D006484 5.7e-10 68.2 83 43.4
CSS0043767 Camellia sinensis var. sinensis HOM05D002306 ORTHO05D006484 7.5e-10 67.8 74 47.3
HanXRQChr15g0485701 Helianthus annuus HOM05D002306 ORTHO05D006484 7.5e-10 67.8 72 47.2
DCAR_008946 Daucus carota HOM05D002306 ORTHO05D006484 9.8e-10 67.4 72 48.6
Lsat_1_v5_gn_9_49781 Lactuca sativa HOM05D002306 ORTHO05D006484 1.7e-09 66.6 68 51.5
THA.LOC104803913 Tarenaya hassleriana HOM05D002306 ORTHO05D006484 1.7e-09 66.6 84 46.4
EL10Ac3g05270 Beta vulgaris HOM05D002306 ORTHO05D006484 2.8e-09 65.9 77 46.8
Nitab4.5_0000548g0070 Nicotiana tabacum HOM05D002306 ORTHO05D006484 3.7e-09 65.5 72 48.6
Potri.012G017000 Populus trichocarpa HOM05D002306 ORTHO05D006484 3.7e-09 65.5 70 48.6
Duzib068G0867 Durio zibethinus HOM05D002306 ORTHO05D006484 6.3e-09 64.7 83 43.4
SGA_v2.0_scaffold192G40528 Striga asiatica HOM05D005626 ORTHO05D007032 1.1e-08 63.9 73 47.9
Lj1g0020624 Lotus japonicus HOM05D002306 ORTHO05D006484 1.4e-08 63.5 70 47.1
arahy.Tifrunner.gnm1.ann1.XWYM96 Arachis hypogaea HOM05D002476 ORTHO05D002652 3.1e-08 62.4 77 44.2
AUR62019413 Chenopodium quinoa HOM05D002306 ORTHO05D006484 5.4e-08 61.6 71 49.3
Glyma.14G131800 Glycine max HOM05D002306 ORTHO05D006484 2.7e-07 59.3 70 47.1


User provided reference genes

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