Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CBR_g49225 Chara braunii HOM05D000068 ORTHO05D009371 0.0e+00 1088.2 552 100.0
Mapoly0025s0012 Marchantia polymorpha HOM05D000068 ORTHO05D009371 1.4e-46 191.8 233 45.1
Pp3c6_20190 Physcomitrium patens HOM05D000068 ORTHO05D009371 6.7e-41 172.9 211 43.1
SMO119G0430 Selaginella moellendorffii HOM05D000068 ORTHO05D009371 1.9e-40 171.4 206 44.7
Aqoxy2G01127_Aqoxy2G01128 Aquilegia oxysepala HOM05D000068 ORTHO05D009371 1.0e-33 149.1 220 38.6
TAR633G0063 Trochodendron aralioides HOM05D000068 ORTHO05D009371 2.8e-31 141.0 222 36.9
CiPaw.10G010800 Carya illinoinensis HOM05D000068 ORTHO05D009371 9.0e-30 136.0 206 37.9
COL.COLO4_29711 Corchorus olitorius HOM05D000068 ORTHO05D009371 1.5e-29 135.2 204 38.2
Nn6g34878 Nelumbo nucifera HOM05D000068 ORTHO05D009371 1.5e-29 135.2 220 34.5
RcHm_v2.0_Chr3g0474121 Rosa chinensis HOM05D000068 ORTHO05D009371 1.5e-29 135.2 201 39.3
Haze_19627 Corylus avellana HOM05D000068 ORTHO05D009371 2.6e-29 134.4 267 33.0
PGR004G2595 Punica granatum HOM05D000068 ORTHO05D009371 2.6e-29 134.4 216 38.9
GSVIVG01033860001 Vitis vinifera HOM05D000068 ORTHO05D009371 3.4e-29 134.0 262 33.2
Os04g0413000 Oryza sativa ssp. japonica HOM05D000068 ORTHO05D009371 7.6e-29 132.9 207 37.7
ClCG10G018880 Citrullus lanatus HOM05D000068 ORTHO05D009371 1.3e-28 132.1 202 35.6
QL07p038656 Quercus lobata HOM05D000068 ORTHO05D009371 1.3e-28 132.1 218 34.4
FAN02G2951 Fragaria x ananassa HOM05D000068 ORTHO05D009371 1.7e-28 131.7 203 38.4
FAN14G1721 Fragaria x ananassa HOM05D000068 ORTHO05D009371 1.7e-28 131.7 203 38.4
THA.LOC104816394 Tarenaya hassleriana HOM05D000068 ORTHO05D009371 1.7e-28 131.7 258 33.7
FvH4_6g19080 Fragaria vesca HOM05D000068 ORTHO05D009371 2.2e-28 131.3 203 37.9
FAN14G1829 Fragaria x ananassa HOM05D000068 ORTHO05D009371 2.2e-28 131.3 203 37.9
FAN14G4825 Fragaria x ananassa HOM05D000068 ORTHO05D009371 2.2e-28 131.3 203 37.9
CARHR209340 Cardamine hirsuta HOM05D000068 ORTHO05D009371 2.9e-28 131.0 210 35.2
PSO384G0401 Papaver somniferum HOM05D000068 ORTHO05D009371 2.9e-28 131.0 201 36.3
CsaV3_3G037360 Cucumis sativus L. HOM05D000068 ORTHO05D009371 4.9e-28 130.2 201 35.3
Duzib093G0600 Durio zibethinus HOM05D000068 ORTHO05D009371 6.5e-28 129.8 212 38.7
MBI01_g00909_MAGBIO Magnolia biondii HOM05D000068 ORTHO05D009371 6.5e-28 129.8 201 38.8
MELO3C009480.2 Cucumis melo HOM05D000068 ORTHO05D009371 8.4e-28 129.4 201 34.8
Thhalv10012955m.g Eutrema salsugineum HOM05D000068 ORTHO05D009371 8.4e-28 129.4 222 35.1
AT5G03910 Arabidopsis thaliana HOM05D000068 ORTHO05D009371 2.5e-27 127.9 219 34.2
BcaC06g32096 Brassica carinata HOM05D000068 ORTHO05D009371 2.5e-27 127.9 195 37.4
Gohir.D04G098800 Gossypium hirsutum HOM05D000068 ORTHO05D009371 2.5e-27 127.9 205 36.6
Gorai.009G401200 Gossypium raimondii HOM05D000068 ORTHO05D009371 2.5e-27 127.9 205 36.6
Sp6g38810 Schrenkiella parvula HOM05D000068 ORTHO05D009371 2.5e-27 127.9 222 34.7
AL6G13500 Arabidopsis lyrata HOM05D000068 ORTHO05D009371 4.2e-27 127.1 223 33.2
Lj2A138T48 Lonicera japonica HOM05D000068 ORTHO05D009371 4.2e-27 127.1 228 34.2
C09p73000 Brassica napus HOM05D000068 ORTHO05D009371 5.5e-27 126.7 198 37.9
Cpa.g.sc5.7 Carica papaya HOM05D000068 ORTHO05D009371 5.5e-27 126.7 202 35.6
PSO339G3788 Papaver somniferum HOM05D000068 ORTHO05D009371 5.5e-27 126.7 201 35.3
Cc06_g05950 Coffea canephora HOM05D000068 ORTHO05D009371 7.1e-27 126.3 230 33.5
Prupe.7G104700 Prunus persica HOM05D000068 ORTHO05D009371 9.3e-27 125.9 222 34.7
A10p32200 Brassica napus HOM05D000068 ORTHO05D009371 1.2e-26 125.6 209 35.4
BraA10t45263Z Brassica rapa HOM05D000068 ORTHO05D009371 1.2e-26 125.6 209 35.4
Lsat_1_v5_gn_5_165121 Lactuca sativa HOM05D000068 ORTHO05D009371 1.6e-26 125.2 207 36.7
Aa31LG1G21360 Aethionema arabicum HOM05D001354 ORTHO05D007486 2.1e-26 124.8 214 34.6
BolC9t60035H Brassica oleracea HOM05D000068 ORTHO05D009371 2.1e-26 124.8 198 37.4
DCAR_020741 Daucus carota HOM05D000068 ORTHO05D009371 2.1e-26 124.8 207 37.2
ECA248G3626 Erigeron canadensis HOM05D000068 ORTHO05D009371 2.1e-26 124.8 205 36.6
Peaxi162Scf00404g00221 Petunia axillaris HOM05D000068 ORTHO05D009371 2.1e-26 124.8 222 36.9
CAN.G397.62 Capsicum annuum HOM05D000068 ORTHO05D009371 2.7e-26 124.4 230 33.5
CDE06G2143 Ceratophyllum demersum HOM05D000068 ORTHO05D009371 2.7e-26 124.4 200 32.0
Oeu047858.1 Olea europaea HOM05D000068 ORTHO05D009371 4.6e-26 123.6 225 32.9
Actinidia05420 Actinidia chinensis HOM05D000068 ORTHO05D009371 6.0e-26 123.2 201 34.8
arahy.Tifrunner.gnm1.ann1.32L6HG Arachis hypogaea HOM05D000068 ORTHO05D009371 6.0e-26 123.2 221 34.4
arahy.Tifrunner.gnm1.ann1.F7MRFZ Arachis hypogaea HOM05D000068 ORTHO05D009371 6.0e-26 123.2 221 34.4
Ciclev10013660m.g Citrus clementina HOM05D000068 ORTHO05D009371 6.0e-26 123.2 224 35.3
Potri.006G211700 Populus trichocarpa HOM05D000068 ORTHO05D009371 1.0e-25 122.5 237 32.9
Sabra06G0163200 Salix brachista HOM05D000068 ORTHO05D009371 1.3e-25 122.1 200 36.0
PGSC0003DMG401008875 Solanum tuberosum HOM05D000068 ORTHO05D009371 1.3e-25 122.1 230 32.6
Thecc.05G090700 Theobroma cacao HOM05D000068 ORTHO05D009371 1.3e-25 122.1 201 34.8
Migut.J01023 Erythranthe guttata HOM05D000068 ORTHO05D009371 3.0e-25 120.9 224 33.9
SGA_v2.0_scaffold31G12905 Striga asiatica HOM05D000068 ORTHO05D009371 5.1e-25 120.2 201 36.8
TWI77G0227 Tripterygium wilfordii HOM05D000068 ORTHO05D009371 5.1e-25 120.2 209 33.5
HPP92_023009 Vanilla planifolia HOM05D000068 ORTHO05D009371 8.7e-25 119.4 195 34.4
Gohir.A04G062000 Gossypium hirsutum HOM05D000068 ORTHO05D009371 1.9e-24 118.2 218 34.4
Manes.08G026400 Manihot esculenta HOM05D000068 ORTHO05D009371 3.3e-24 117.5 212 34.0
Solyc09g009910.4 Solanum lycopersicum HOM05D000068 ORTHO05D009371 5.7e-24 116.7 220 32.3
Sc02g0000310 Simmondsia chinensis HOM05D000068 ORTHO05D009371 9.7e-24 115.9 213 35.7
Sopen09g004660 Solanum pennellii HOM05D000068 ORTHO05D009371 9.7e-24 115.9 220 32.3
Atru.chr8.1483 Acer truncatum HOM05D000068 ORTHO05D009371 1.3e-23 115.5 206 34.0
Rhsim03G0074500 Rhododendron simsii HOM05D000068 ORTHO05D009371 1.6e-23 115.2 207 33.8
vmacro07417 Vaccinium macrocarpon HOM05D000068 ORTHO05D009371 1.6e-23 115.2 200 34.0
EL10Ac7g16904 Beta vulgaris HOM05D000068 ORTHO05D009371 3.7e-23 114.0 205 34.1
TPR.G9905 Trifolium pratense HOM05D000068 ORTHO05D009371 2.4e-22 111.3 220 32.3
HanXRQChr02g0032661 Helianthus annuus HOM05D000068 ORTHO05D009371 4.1e-22 110.5 205 34.1
Ah.08g210500 Amaranthus hybridus HOM05D000892 ORTHO05D009371 6.9e-22 109.8 202 33.2
ATR0776G090 Amborella trichopoda HOM05D000068 ORTHO05D009371 6.9e-22 109.8 153 38.6
MD12G1026900 Malus domestica HOM05D000068 ORTHO05D009371 6.9e-22 109.8 222 32.4
Medtr1g059830 Medicago truncatula HOM05D000068 ORTHO05D009371 6.9e-22 109.8 201 31.8
Cfa016622 Carpinus fangiana HOM05D000068 ORTHO05D009371 9.0e-22 109.4 307 28.0
Hund19921 Selenicereus undatus HOM05D000068 ORTHO05D009371 1.2e-21 109.0 202 34.2
Ca_00898_v3 Cicer arietinum L. HOM05D000068 ORTHO05D009371 2.0e-21 108.2 201 33.8
Lj5g0025633 Lotus japonicus HOM05D000068 ORTHO05D009371 3.4e-21 107.5 226 29.6
AUR62006194 Chenopodium quinoa HOM05D000068 ORTHO05D009371 7.6e-21 106.3 205 31.2
Lalb_Chr02g0154911 Lupinus albus HOM05D000068 ORTHO05D009371 7.6e-21 106.3 186 31.2
Carub.0006s0287 Capsella rubella HOM05D000068 ORTHO05D009371 6.1e-18 96.7 156 34.6
Zm00001eb083810 Zea mays HOM05D000068 ORTHO05D009371 6.1e-18 96.7 206 30.1
Glyma.10G073800 Glycine max HOM05D000068 ORTHO05D009371 1.3e-17 95.5 230 30.9
AUR62037027 Chenopodium quinoa HOM05D000068 ORTHO05D009371 3.0e-17 94.4 181 32.0
BcaC03g12973 Brassica carinata HOM05D000068 ORTHO05D009371 1.4e-14 85.5 102 43.1
Nitab4.5_0000692g0100 Nicotiana tabacum HOM05D006502 ORTHO05D007704 5.3e-14 83.6 183 31.1
SHI23853 Sapria himalayana HOM05D000068 ORTHO05D009371 8.8e-09 66.2 135 30.4
SEGI_11172 Sequoiadendron giganteum HOM05D000068 ORTHO05D009371 2.6e-08 64.7 64 53.1
PRCOL_00002334 Prasinoderma coloniale HOM05D000068 ORTHO05D009371 2.4e-06 58.2 168 30.4


User provided reference genes

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