Gene: Sopen09g004660
General Information
Structural Information
- Species Solanum pennellii
- Gene Identifier Sopen09g004660
- Transcript Identifier Sopen09g004660.1
- Gene Type Coding gene
- Location Spenn-ch09 : 3500372-3509159 : negative
Gene Family Information
- ID HOM05D000068
- #Genes/#Species 3957/100
- Phylogenetic origin
- ID ORTHO05D009371
- #Genes/#Species 103/88
- Phylogenetic origin
Gene Duplication Information
- Block Duplication Block duplicate
Labels
Identifiers
- tid Sopen09g004660.1
Descriptions
- Description member of ATH subfamily | ABC2 homolog 12 (ATH12) | FUNCTIONS IN: ATPase activity, coupled to transmembrane movement of substances, transporter activity | INVOLVED IN: transport, transmembrane transport | LOCATED IN: chloroplast, chloroplast envelope | EXPRESSED IN: 22 plant structures | EXPRESSED DURING: 13 growth stages | CONTAINS InterPro DOMAIN/s: ATPase, AAA type, core , ABC transporter-like , ABC transporter, transmembrane domain, type 1 , ABC transporter integral membrane type 1 , ABC transporter, transmembrane domain , ABC transporter, conserved site | BEST Arabidopsis thaliana protein match is: P-glycoprotein 14
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0055085 | IEA | InterPro | transmembrane transport |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005524 | IEA | InterPro | ATP binding | |
| GO:0140359 | IEA | InterPro | ABC-type transporter activity |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0016021 | IEA | InterPro | integral component of membrane | |
| GO:0009507 | ISO | PLAZA Integrative Orthology | chloroplast | AT5G03910 |
| GO:0009941 | ISO | PLAZA Integrative Orthology | chloroplast envelope | AT5G03910 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR011527 | ABC transporter type 1, transmembrane domain |
| IPR027417 | P-loop containing nucleoside triphosphate hydrolase |
| IPR003593 | AAA+ ATPase domain |
| IPR003439 | ABC transporter-like, ATP-binding domain |
| IPR036640 | ABC transporter type 1, transmembrane domain superfamily |
| IPR039421 | Type 1 protein exporter |
| Mapman id | Description |
|---|---|
| 24.1.3.1.1 | Solute transport.primary active transport.ABC superfamily.ABC1 family.subfamily ABCB transporter |