Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CBR_g48741 Chara braunii HOM05D004194 ORTHO05D005641 0.0e+00 1279.6 656 100.0
Pp3c18_13220 Physcomitrium patens HOM05D004194 ORTHO05D005641 1.0e-205 720.7 511 71.0
Mapoly0005s0193 Marchantia polymorpha HOM05D004194 ORTHO05D005641 6.6e-205 718.0 490 73.9
Nn5g29879 Nelumbo nucifera HOM05D004194 ORTHO05D005641 1.6e-203 713.4 472 73.5
ECA232G1743 Erigeron canadensis HOM05D004194 ORTHO05D005641 2.1e-203 713.0 456 74.8
RcHm_v2.0_Chr7g0216141 Rosa chinensis HOM05D004194 ORTHO05D005641 2.1e-203 713.0 467 73.2
AagrBONN_evm.TU.Sc2ySwM_362.1891 Anthoceros agrestis HOM05D004194 ORTHO05D005641 4.0e-202 708.8 542 68.3
GSVIVG01009181001 Vitis vinifera HOM05D004194 ORTHO05D005641 8.9e-202 707.6 458 74.0
PSO170G4697 Papaver somniferum HOM05D004194 ORTHO05D005641 2.6e-201 706.1 457 74.4
vmacro17477 Vaccinium macrocarpon HOM05D004194 ORTHO05D005641 7.5e-201 704.5 475 72.2
FvH4_5g34710 Fragaria vesca HOM05D004194 ORTHO05D005641 9.9e-201 704.1 457 74.2
CDE02G0818 Ceratophyllum demersum HOM05D004194 ORTHO05D005641 1.3e-200 703.7 458 73.1
Hma1.2p1_0010F.1_g006650 Hydrangea macrophylla HOM05D004194 ORTHO05D005641 1.3e-200 703.7 457 74.0
PSO210G0577 Papaver somniferum HOM05D004194 ORTHO05D005641 1.3e-200 703.7 476 72.3
ATR0767G266 Amborella trichopoda HOM05D004194 ORTHO05D005641 1.7e-200 703.4 457 73.5
CDE01G0047 Ceratophyllum demersum HOM05D004194 ORTHO05D005641 2.2e-200 703.0 458 73.1
Cpa.g.sc21.21 Carica papaya HOM05D004194 ORTHO05D005641 2.9e-200 702.6 468 71.4
TWI12G1457 Tripterygium wilfordii HOM05D004194 ORTHO05D005641 2.9e-200 702.6 457 73.7
Sopen04g030120 Solanum pennellii HOM05D004194 ORTHO05D005641 3.7e-200 702.2 465 71.2
TAR625G0434 Trochodendron aralioides HOM05D004194 ORTHO05D005641 3.7e-200 702.2 457 74.0
Cfa013797 Carpinus fangiana HOM05D004194 ORTHO05D005641 1.1e-199 700.7 508 67.9
Thecc.08G071000 Theobroma cacao HOM05D004194 ORTHO05D005641 1.1e-199 700.7 457 72.4
CiPaw.07G165400 Carya illinoinensis HOM05D004194 ORTHO05D005641 1.4e-199 700.3 485 69.7
vmacro21340 Vaccinium macrocarpon HOM05D004194 ORTHO05D005641 3.2e-199 699.1 457 73.5
CANSAT21G1481 Cannabis sativa HOM05D004194 ORTHO05D005641 4.1e-199 698.7 467 71.7
Haze_22460 Corylus avellana HOM05D004194 ORTHO05D005641 4.1e-199 698.7 508 67.9
MD12G1008900 Malus domestica HOM05D004194 ORTHO05D005641 4.1e-199 698.7 458 73.6
Phvul.002G296600 Phaseolus vulgaris HOM05D004194 ORTHO05D005641 5.4e-199 698.4 461 72.9
Solyc04g076320.4 Solanum lycopersicum HOM05D004194 ORTHO05D005641 5.4e-199 698.4 465 71.0
FAN13G1619 Fragaria x ananassa HOM05D004194 ORTHO05D005641 7.1e-199 698.0 471 72.4
Glyma.06G096700 Glycine max HOM05D004194 ORTHO05D005641 7.1e-199 698.0 460 73.5
Lalb_Chr11g0064971 Lupinus albus HOM05D004194 ORTHO05D005641 7.1e-199 698.0 508 68.5
Atru.chr13.1009 Acer truncatum HOM05D004194 ORTHO05D005641 9.2e-199 697.6 458 72.5
Actinidia10274 Actinidia chinensis HOM05D004194 ORTHO05D005641 9.2e-199 697.6 507 68.0
Duzib093G0846 Durio zibethinus HOM05D004194 ORTHO05D005641 1.2e-198 697.2 457 72.4
VMungo1309G1669 Vigna mungo HOM05D004194 ORTHO05D005641 1.6e-198 696.8 461 72.9
Medtr3g100220 Medicago truncatula HOM05D004194 ORTHO05D005641 2.1e-198 696.4 467 72.2
Glyma.04G094600 Glycine max HOM05D004194 ORTHO05D005641 2.7e-198 696.0 460 73.3
Peaxi162Scf00454g00416 Petunia axillaris HOM05D004194 ORTHO05D005641 2.7e-198 696.0 470 71.3
Hund21605 Selenicereus undatus HOM05D004194 ORTHO05D005641 3.5e-198 695.7 458 72.9
Aqoxy6G00868 Aquilegia oxysepala HOM05D004194 ORTHO05D005641 6.0e-198 694.9 458 74.2
Ciclev10000871m.g Citrus clementina HOM05D004194 ORTHO05D005641 6.0e-198 694.9 458 72.3
TAR381G0874 Trochodendron aralioides HOM05D004194 ORTHO05D005641 6.0e-198 694.9 457 72.6
CARHR202370 Cardamine hirsuta HOM05D004194 ORTHO05D005641 1.3e-197 693.7 458 71.6
AUR62001023 Chenopodium quinoa HOM05D004194 ORTHO05D005641 1.7e-197 693.3 457 72.4
Ca_23440_v3 Cicer arietinum L. HOM05D004194 ORTHO05D005641 1.7e-197 693.3 457 73.1
Manes.18G058500 Manihot esculenta HOM05D004194 ORTHO05D005641 1.7e-197 693.3 512 67.2
PGSC0003DMG400009343 Solanum tuberosum HOM05D004194 ORTHO05D005641 1.7e-197 693.3 475 69.9
EL10Ac4g09117 Beta vulgaris HOM05D004194 ORTHO05D005641 3.9e-197 692.2 464 71.8
BolC9t59414H Brassica oleracea HOM05D004194 ORTHO05D005641 3.9e-197 692.2 468 69.9
BcaNung01903 Brassica carinata HOM05D004194 ORTHO05D005641 5.1e-197 691.8 470 69.1
Prupe.1G532200 Prunus persica HOM05D004194 ORTHO05D005641 5.1e-197 691.8 456 73.0
CSS0028335 Camellia sinensis var. sinensis HOM05D004194 ORTHO05D005641 6.6e-197 691.4 457 72.4
AUR62004928 Chenopodium quinoa HOM05D004194 ORTHO05D005641 6.6e-197 691.4 457 72.4
QL09p017817 Quercus lobata HOM05D004194 ORTHO05D005641 6.6e-197 691.4 457 73.1
SMO143G0205 Selaginella moellendorffii HOM05D004194 ORTHO05D005641 8.6e-197 691.0 462 72.3
Rhsim06G0071600 Rhododendron simsii HOM05D004194 ORTHO05D005641 1.1e-196 690.6 473 70.6
Sp6g32570 Schrenkiella parvula HOM05D004194 ORTHO05D005641 1.1e-196 690.6 458 71.4
Lj4A737T61 Lonicera japonica HOM05D004194 ORTHO05D005641 1.5e-196 690.3 462 72.3
DCAR_012855 Daucus carota HOM05D004194 ORTHO05D005641 1.9e-196 689.9 458 72.1
C09p65910 Brassica napus HOM05D004194 ORTHO05D005641 2.5e-196 689.5 468 69.7
ClCG08G011660 Citrullus lanatus HOM05D004194 ORTHO05D005641 2.5e-196 689.5 458 70.5
A10p26770 Brassica napus HOM05D004194 ORTHO05D005641 3.3e-196 689.1 468 69.7
MELO3C003523.2 Cucumis melo HOM05D004194 ORTHO05D005641 5.6e-196 688.3 457 71.8
Sed0011017 Sechium edule HOM05D004194 ORTHO05D005641 7.3e-196 688.0 457 70.5
Cc10_g15890 Coffea canephora HOM05D004194 ORTHO05D005641 9.5e-196 687.6 467 70.9
FAN08G1093 Fragaria x ananassa HOM05D004194 ORTHO05D005641 9.5e-196 687.6 507 67.3
Gorai.002G139300 Gossypium raimondii HOM05D004194 ORTHO05D005641 9.5e-196 687.6 457 71.8
CsaV3_2G030250 Cucumis sativus L. HOM05D004194 ORTHO05D005641 1.2e-195 687.2 477 68.1
CsaV3_3G047990 Cucumis sativus L. HOM05D004194 ORTHO05D005641 1.2e-195 687.2 457 71.6
Thhalv10013269m.g Eutrema salsugineum HOM05D004194 ORTHO05D005641 1.2e-195 687.2 458 70.5
Gohir.A01G126900 Gossypium hirsutum HOM05D004194 ORTHO05D005641 1.6e-195 686.8 457 71.6
BraA10t44732Z Brassica rapa HOM05D004194 ORTHO05D005641 2.1e-195 686.4 520 66.0
Gohir.D01G114300 Gossypium hirsutum HOM05D004194 ORTHO05D005641 2.1e-195 686.4 457 71.6
Potri.002G106200 Populus trichocarpa HOM05D004194 ORTHO05D005641 2.1e-195 686.4 485 67.6
Lsat_1_v5_gn_9_75040 Lactuca sativa HOM05D004194 ORTHO05D005641 3.6e-195 685.6 458 73.4
FAN04G1572 Fragaria x ananassa HOM05D004194 ORTHO05D005641 4.7e-195 685.3 505 67.3
Sed0019515 Sechium edule HOM05D004194 ORTHO05D005641 4.7e-195 685.3 457 71.3
Hund09317 Selenicereus undatus HOM05D004194 ORTHO05D005641 6.2e-195 684.9 449 73.7
THA.LOC104799791 Tarenaya hassleriana HOM05D004194 ORTHO05D005641 6.2e-195 684.9 510 66.7
FAN18G1922 Fragaria x ananassa HOM05D004194 ORTHO05D005641 8.1e-195 684.5 492 69.3
TPR.G6303 Trifolium pratense HOM05D004194 ORTHO05D005641 8.1e-195 684.5 511 66.5
Eucgr.F02151 Eucalyptus grandis HOM05D004194 ORTHO05D005641 1.1e-194 684.1 497 67.4
Lj1g0000709 Lotus japonicus HOM05D004194 ORTHO05D005641 1.8e-194 683.3 457 71.8
MSTRG.28070 Avicennia marina HOM05D004194 ORTHO05D005641 3.1e-194 682.6 458 71.8
Carub.0006s0941 Capsella rubella HOM05D004194 ORTHO05D005641 4.0e-194 682.2 458 70.7
CAN.G475.29 Capsicum annuum HOM05D004194 ORTHO05D005641 4.0e-194 682.2 461 70.3
AT5G10920 Arabidopsis thaliana HOM05D004194 ORTHO05D005641 8.9e-194 681.0 458 70.3
AL6G21480 Arabidopsis lyrata HOM05D004194 ORTHO05D005641 2.0e-193 679.9 458 70.1
THA.LOC104806871 Tarenaya hassleriana HOM05D004194 ORTHO05D005641 2.0e-193 679.9 458 71.2
CANSAT21G2248 Cannabis sativa HOM05D004194 ORTHO05D005641 2.6e-193 679.5 518 66.0
Psat5g048920 Pisum sativum HOM05D004194 ORTHO05D005641 2.6e-193 679.5 460 71.5
arahy.Tifrunner.gnm1.ann1.S0XZCZ Arachis hypogaea HOM05D004194 ORTHO05D005641 4.4e-193 678.7 457 71.6
Lsat_1_v5_gn_6_104960 Lactuca sativa HOM05D004194 ORTHO05D005641 4.4e-193 678.7 529 65.6
SalBow6G2182 Salvia bowleyana HOM05D004194 ORTHO05D005641 4.4e-193 678.7 458 70.7
PGR042G2811 Punica granatum HOM05D004194 ORTHO05D005641 5.8e-193 678.3 505 65.9
unitig_578.g16695 Utricularia gibba HOM05D004194 ORTHO05D005641 4.2e-191 672.2 481 69.0
MBI16_g12466_MAGBIO Magnolia biondii HOM05D004194 ORTHO05D005641 1.0e-189 667.5 459 71.7
SalBow8G0776 Salvia bowleyana HOM05D004194 ORTHO05D005641 3.0e-189 666.0 480 67.5
Aa31LG3G16210 Aethionema arabicum HOM05D004194 ORTHO05D005641 6.6e-189 664.8 526 63.7
MELO3C011085.2 Cucumis melo HOM05D004194 ORTHO05D005641 8.7e-189 664.5 495 64.2
arahy.Tifrunner.gnm1.ann1.N12FQY Arachis hypogaea HOM05D004194 ORTHO05D005641 9.6e-188 661.0 490 66.7
Zm00001eb396370 Zea mays HOM05D004194 ORTHO05D005641 8.1e-187 657.9 489 66.1
Sabra02G0083500 Salix brachista HOM05D004194 ORTHO05D005641 4.0e-186 655.6 510 63.1
SGA_v2.0_scaffold5G02969 Striga asiatica HOM05D004194 ORTHO05D005641 3.4e-185 652.5 508 64.6
ClCG11G014580 Citrullus lanatus HOM05D004194 ORTHO05D005641 2.4e-183 646.4 463 68.9
PRCOL_00005568 Prasinoderma coloniale HOM05D004194 ORTHO05D005641 3.3e-180 636.0 453 67.3
Ah.06g192260 Amaranthus hybridus HOM05D004194 ORTHO05D005641 2.9e-176 622.9 404 74.5
COL.COLO4_35249 Corchorus olitorius HOM05D004194 ORTHO05D005641 4.2e-175 619.0 457 66.7
Os03g0305500 Oryza sativa ssp. japonica HOM05D004194 ORTHO05D005641 6.0e-174 615.1 427 69.3
SGA_v2.0_scaffold24G10675 Striga asiatica HOM05D004194 ORTHO05D005641 8.7e-173 611.3 406 72.7
HPP92_001058 Vanilla planifolia HOM05D004194 ORTHO05D005641 1.5e-172 610.5 505 62.6
SHI09678 Sapria himalayana HOM05D004194 ORTHO05D005641 4.3e-172 609.0 465 63.9
Nitab4.5_0010888g0020 Nicotiana tabacum HOM05D004194 ORTHO05D005641 3.1e-170 602.8 383 75.5
Migut.N01596 Erythranthe guttata HOM05D004194 ORTHO05D005641 5.3e-170 602.1 457 64.8
Nitab4.5_0000131g0240 Nicotiana tabacum HOM05D004194 ORTHO05D005641 9.0e-170 601.3 383 75.5
Dinv42612 Davidia involucrata HOM05D004194 ORTHO05D005641 7.1e-167 591.7 378 76.2
BcaC01g05557 Brassica carinata HOM05D004194 ORTHO05D005641 2.1e-163 580.1 451 63.9
MD14G1006200 Malus domestica HOM05D004194 ORTHO05D005641 1.1e-162 577.8 460 64.1
Phvul.009G036600 Phaseolus vulgaris HOM05D004194 ORTHO05D005641 3.1e-162 576.2 374 74.3
BcaC03g13340 Brassica carinata HOM05D004194 ORTHO05D005641 2.9e-160 569.7 458 63.3
Lalb_Chr08g0242531 Lupinus albus HOM05D004194 ORTHO05D005641 9.3e-159 564.7 371 72.8
MD14G1006400 Malus domestica HOM05D004194 ORTHO05D005641 1.3e-157 560.8 379 73.1
BcaC04g19277 Brassica carinata HOM05D004194 ORTHO05D005641 6.9e-154 548.5 436 61.9
BolC2t06434H Brassica oleracea HOM05D004194 ORTHO05D005641 9.0e-154 548.1 459 61.0
HanXRQChr15g0484861 Helianthus annuus HOM05D004194 ORTHO05D005641 3.8e-152 542.7 711 44.2
C03p24950 Brassica napus HOM05D004194 ORTHO05D005641 2.5e-151 540.0 451 60.5
Sc11g0003910 Simmondsia chinensis HOM05D004194 ORTHO05D005641 7.4e-140 501.9 323 75.5
Actinidia33569 Actinidia chinensis HOM05D004194 ORTHO05D005641 5.5e-135 485.7 426 59.9
BcaNung01905 Brassica carinata HOM05D004194 ORTHO05D005641 1.0e-104 385.2 330 58.5
Oeu049772.1 Olea europaea HOM05D004194 ORTHO05D005641 3.4e-100 370.2 235 74.0
Lj4C718T1 Lonicera japonica HOM05D004194 ORTHO05D005641 3.0e-96 357.1 256 68.8
MCO11G430 Micromonas commoda HOM05D004194 ORTHO05D005641 4.3e-95 353.2 464 40.5
Cre01.g021251 Chlamydomonas reinhardtii HOM05D004194 ORTHO05D005641 1.8e-93 347.8 472 39.6
Sed0012940 Sechium edule HOM05D004194 ORTHO05D005641 1.2e-92 345.1 293 58.0
Cfa022469 Carpinus fangiana HOM05D004194 ORTHO05D005641 5.1e-88 329.7 457 38.7
C02p04750 Brassica napus HOM05D004194 ORTHO05D005641 1.4e-82 311.6 246 62.2
HPP92_001149 Vanilla planifolia HOM05D004194 ORTHO05D005641 1.2e-76 292.0 200 69.5
Oeu049771.1 Olea europaea HOM05D004194 ORTHO05D005641 6.6e-64 249.6 232 54.3
arahy.Tifrunner.gnm1.ann1.1M3GV3 Arachis hypogaea HOM05D004194 ORTHO05D005641 1.8e-56 224.9 131 81.7
Ah.06g192250 Amaranthus hybridus HOM05D004194 ORTHO05D005641 2.5e-50 204.5 400 35.8
A02p00760 Brassica napus HOM05D004194 ORTHO05D005641 1.2e-49 202.2 165 64.8
Psat6g188680 Pisum sativum HOM05D004194 ORTHO05D005641 4.6e-49 200.3 167 61.7
Oeu035352.1 Olea europaea HOM05D004194 ORTHO05D005641 4.8e-46 190.3 138 65.9
PSO478G2000 Papaver somniferum HOM05D004194 ORTHO05D005641 6.2e-46 189.9 196 53.6
SEGI_11237 Sequoiadendron giganteum HOM05D004194 ORTHO05D005641 2.9e-43 181.0 98 89.8
Pp3s34_420 Physcomitrium patens HOM05D000198 ORTHO05D309562 5.5e-42 176.8 373 31.4
SEGI_18549 Sequoiadendron giganteum HOM05D004194 ORTHO05D005641 5.1e-40 170.2 119 65.5
C02p04760 Brassica napus HOM05D004194 ORTHO05D005641 6.3e-38 163.3 129 60.5
BcaB01g03715 Brassica carinata HOM05D004194 ORTHO05D005641 3.1e-37 161.0 248 40.7
Oeu028023.1 Olea europaea HOM05D004194 ORTHO05D033851 3.6e-33 147.5 92 72.8
Psat6g188720 Pisum sativum HOM05D001289 ORTHO05D005641 2.0e-31 141.7 119 59.7
PSO349G0016 Papaver somniferum HOM05D004194 ORTHO05D005641 4.8e-30 137.1 80 81.2
A02p00750 Brassica napus HOM05D004194 ORTHO05D005641 2.1e-25 121.7 92 67.4
Aqoxy84s004 Aquilegia oxysepala HOM05D004194 ORTHO05D077318 3.0e-24 117.9 290 29.0
Actinidia19243 Actinidia chinensis HOM05D004194 ORTHO05D005641 5.1e-24 117.1 129 44.2
BraA02t05060Z Brassica rapa HOM05D004194 ORTHO05D033851 8.8e-24 116.3 73 75.3
VMungo0331G0568 Vigna mungo HOM05D004194 ORTHO05D007986 2.0e-20 105.1 100 56.0
VMungo1127G2164 Vigna mungo HOM05D004194 ORTHO05D007986 7.7e-20 103.2 100 54.0
BcaNung01906 Brassica carinata HOM05D004194 ORTHO05D005641 8.2e-14 83.2 54 64.8
Psat6g163800 Pisum sativum HOM05D004194 ORTHO05D037373 3.2e-10 71.2 67 53.7
Psat2g086120 Pisum sativum HOM05D004194 ORTHO05D037373 4.2e-10 70.9 47 68.1
Sed0027437 Sechium edule HOM05D004194 ORTHO05D033851 7.2e-10 70.1 40 77.5
Pp3c23_19500 Physcomitrium patens HOM05D003197 ORTHO05D003769 8.0e-09 66.6 324 25.0
SMO197G0092 Selaginella moellendorffii HOM05D003197 ORTHO05D003769 2.0e-07 62.0 340 25.0
Psat3g096720 Pisum sativum HOM05D004194 ORTHO05D324018 4.8e-06 57.4 35 71.4


User provided reference genes

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