Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CBR_g48493 Chara braunii HOM05D003172 ORTHO05D003708 0.0e+00 1747.6 926 100.0
Cfa022625 Carpinus fangiana HOM05D003172 ORTHO05D003708 4.3e-08 64.7 85 36.5
Aa31LG11G11360 Aethionema arabicum HOM05D003172 ORTHO05D003708 9.5e-08 63.5 91 45.1
Sed0019950 Sechium edule HOM05D003172 ORTHO05D003708 3.6e-07 61.6 87 39.1
THA.LOC104802864 Tarenaya hassleriana HOM05D003172 ORTHO05D003708 3.6e-07 61.6 83 45.8
Mapoly0027s0010 Marchantia polymorpha HOM05D003172 ORTHO05D003708 6.2e-07 60.8 63 47.6
GSVIVG01033382001 Vitis vinifera HOM05D003172 ORTHO05D003708 6.2e-07 60.8 87 41.4
PSO384G1776 Papaver somniferum HOM05D003172 ORTHO05D003708 8.1e-07 60.5 92 41.3
CBR_g17178 Chara braunii HOM05D003172 ORTHO05D003708 1.1e-06 60.1 64 46.9
Ciclev10018788m.g Citrus clementina HOM05D003172 ORTHO05D003708 1.1e-06 60.1 90 42.2
SEGI_39352 Sequoiadendron giganteum HOM05D003172 ORTHO05D003708 1.1e-06 60.1 64 46.9
AagrBONN_evm.TU.Sc2ySwM_362.2336 Anthoceros agrestis HOM05D003172 ORTHO05D003708 1.4e-06 59.7 63 46.0
unitig_736.g22311 Utricularia gibba HOM05D003172 ORTHO05D003708 1.4e-06 59.7 94 43.6
BcaC04g18714 Brassica carinata HOM05D003172 ORTHO05D003708 1.8e-06 59.3 90 44.4
C09p58750 Brassica napus HOM05D003172 ORTHO05D003708 1.8e-06 59.3 90 44.4
Glyma.16G042600 Glycine max HOM05D003172 ORTHO05D003708 1.8e-06 59.3 87 43.7
Glyma.19G109500 Glycine max HOM05D003172 ORTHO05D003708 1.8e-06 59.3 87 43.7
ATR0559G169 Amborella trichopoda HOM05D003172 ORTHO05D003708 2.3e-06 58.9 95 37.9
Haze_19406 Corylus avellana HOM05D003172 ORTHO05D003708 2.3e-06 58.9 90 40.0
Mapoly0036s0115 Marchantia polymorpha HOM05D003172 ORTHO05D003708 2.3e-06 58.9 63 47.6
Sed0012949 Sechium edule HOM05D003172 ORTHO05D003708 2.3e-06 58.9 87 37.9
Sc19g0006520 Simmondsia chinensis HOM05D003172 ORTHO05D003708 2.3e-06 58.9 72 45.8
ATR0697G199 Amborella trichopoda HOM05D003172 ORTHO05D003708 3.1e-06 58.5 95 37.9
AL6G29440 Arabidopsis lyrata HOM05D003172 ORTHO05D003708 3.1e-06 58.5 90 44.4
AT5G18230 Arabidopsis thaliana HOM05D003172 ORTHO05D003708 3.1e-06 58.5 90 44.4
BcaNung04945 Brassica carinata HOM05D003172 ORTHO05D003708 3.1e-06 58.5 90 44.4
A03p08720 Brassica napus HOM05D003172 ORTHO05D003708 3.1e-06 58.5 90 44.4
A10p21290 Brassica napus HOM05D003172 ORTHO05D003708 3.1e-06 58.5 90 44.4
C03p10170 Brassica napus HOM05D003172 ORTHO05D003708 3.1e-06 58.5 90 44.4
BolC3t13502H Brassica oleracea HOM05D003172 ORTHO05D003708 3.1e-06 58.5 90 44.4
BolC9t58717H Brassica oleracea HOM05D003172 ORTHO05D003708 3.1e-06 58.5 90 44.4
BraA03t10195Z Brassica rapa HOM05D003172 ORTHO05D003708 3.1e-06 58.5 90 44.4
BraA10t44192Z Brassica rapa HOM05D003172 ORTHO05D003708 3.1e-06 58.5 90 44.4
COL.COLO4_13621 Corchorus olitorius HOM05D003172 ORTHO05D003708 3.1e-06 58.5 90 42.2
DCAR_016860 Daucus carota HOM05D003172 ORTHO05D003708 3.1e-06 58.5 92 41.3
Thhalv10012672m.g Eutrema salsugineum HOM05D003172 ORTHO05D003708 3.1e-06 58.5 90 44.4
Oeu026879.1 Olea europaea HOM05D003172 ORTHO05D003708 3.1e-06 58.5 90 38.9
Carub.0006s1651 Capsella rubella HOM05D003172 ORTHO05D003708 4.0e-06 58.2 90 44.4
AUR62032669 Chenopodium quinoa HOM05D003172 ORTHO05D003708 4.0e-06 58.2 63 47.6
AUR62035298 Chenopodium quinoa HOM05D003172 ORTHO05D003708 4.0e-06 58.2 63 47.6
Sp6g26090 Schrenkiella parvula HOM05D003172 ORTHO05D003708 5.2e-06 57.8 90 44.4
VMungo0464G1094 Vigna mungo HOM05D003172 ORTHO05D003708 5.2e-06 57.8 91 39.6
BcaB08g36694 Brassica carinata HOM05D003172 ORTHO05D003708 6.8e-06 57.4 83 43.4
CARHR194830 Cardamine hirsuta HOM05D003172 ORTHO05D003708 6.8e-06 57.4 90 43.3
ClCG10G013300 Citrullus lanatus HOM05D003172 ORTHO05D003708 6.8e-06 57.4 87 39.1
MELO3C026894.2 Cucumis melo HOM05D003172 ORTHO05D003708 6.8e-06 57.4 87 39.1
Dinv37006 Davidia involucrata HOM05D003172 ORTHO05D003708 6.8e-06 57.4 85 41.2
BcaB01g05182 Brassica carinata HOM05D003172 ORTHO05D003708 8.9e-06 57.0 90 44.4
Cpa.g.c39914 Carica papaya HOM05D003172 ORTHO05D003708 8.9e-06 57.0 63 46.0
CsaV3_3G043330 Cucumis sativus L. HOM05D003172 ORTHO05D003708 8.9e-06 57.0 87 39.1
ECA233G5856 Erigeron canadensis HOM05D003172 ORTHO05D003708 8.9e-06 57.0 89 41.6
Medtr7g085350 Medicago truncatula HOM05D003172 ORTHO05D003708 8.9e-06 57.0 63 46.0
Prupe.5G242100 Prunus persica HOM05D003172 ORTHO05D003708 8.9e-06 57.0 90 40.0
THA.LOC104801500 Tarenaya hassleriana HOM05D003172 ORTHO05D003708 8.9e-06 57.0 73 45.2
THA.LOC104805751 Tarenaya hassleriana HOM05D003172 ORTHO05D003708 8.9e-06 57.0 73 45.2
THA.LOC104805989 Tarenaya hassleriana HOM05D003172 ORTHO05D003708 8.9e-06 57.0 73 45.2
Thecc.05G292800 Theobroma cacao HOM05D003172 ORTHO05D003708 8.9e-06 57.0 90 40.0
HPP92_013954 Vanilla planifolia HOM05D003172 ORTHO05D003708 8.9e-06 57.0 85 43.5


User provided reference genes

Program Settings