Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CBR_g4804 Chara braunii HOM05D006203 ORTHO05D007675 0.0e+00 1259.6 634 100.0
ATR0820G052 Amborella trichopoda HOM05D006203 ORTHO05D007675 7.8e-94 349.0 421 46.3
Mapoly0036s0040 Marchantia polymorpha HOM05D006203 ORTHO05D007675 7.8e-94 349.0 412 45.6
Pp3c10_9040 Physcomitrium patens HOM05D006203 ORTHO05D007675 2.5e-92 344.0 430 43.5
Pp3c1_26540 Physcomitrium patens HOM05D006203 ORTHO05D007675 9.5e-92 342.0 415 42.7
MBI09_g13282_MAGBIO Magnolia biondii HOM05D006203 ORTHO05D007675 1.6e-91 341.3 440 43.6
SMO165G0112 Selaginella moellendorffii HOM05D006203 ORTHO05D007675 1.8e-90 337.8 417 43.4
TAR628G0500 Trochodendron aralioides HOM05D006203 ORTHO05D007675 1.2e-89 335.1 421 44.2
CDE06G0803 Ceratophyllum demersum HOM05D006203 ORTHO05D007675 2.0e-89 334.3 420 43.8
SEGI_28248 Sequoiadendron giganteum HOM05D006203 ORTHO05D007675 2.0e-89 334.3 405 44.9
Cfa018314 Carpinus fangiana HOM05D006203 ORTHO05D007675 2.6e-89 334.0 426 43.9
Os04g0423700 Oryza sativa ssp. japonica HOM05D006203 ORTHO05D007675 2.6e-89 334.0 420 44.8
Eucgr.F04230 Eucalyptus grandis HOM05D006203 ORTHO05D007675 5.8e-89 332.8 422 45.0
VMungo0720G1833 Vigna mungo HOM05D006203 ORTHO05D007675 5.8e-89 332.8 422 44.3
Duzib116G0092 Durio zibethinus HOM05D006203 ORTHO05D007675 9.8e-89 332.0 418 44.0
AagrBONN_evm.TU.Sc2ySwM_344.5191 Anthoceros agrestis HOM05D006203 ORTHO05D007675 1.7e-88 331.3 400 45.0
HanXRQChr11g0320311 Helianthus annuus HOM05D006203 ORTHO05D007675 2.2e-88 330.9 419 43.7
Hma1.2p1_0105F.1_g050570 Hydrangea macrophylla HOM05D006203 ORTHO05D007675 2.2e-88 330.9 418 44.0
Carub.0001s3458 Capsella rubella HOM05D006203 ORTHO05D007675 2.9e-88 330.5 426 43.0
Aa31LG6G9900 Aethionema arabicum HOM05D006203 ORTHO05D007675 3.7e-88 330.1 419 43.7
Thecc.08G154300 Theobroma cacao HOM05D006203 ORTHO05D007675 4.9e-88 329.7 418 44.3
arahy.Tifrunner.gnm1.ann1.1SB772 Arachis hypogaea HOM05D006203 ORTHO05D007675 1.1e-87 328.6 413 43.1
Phvul.007G080700 Phaseolus vulgaris HOM05D006203 ORTHO05D007675 1.4e-87 328.2 421 44.2
Lsat_1_v5_gn_9_41100 Lactuca sativa HOM05D006203 ORTHO05D007675 2.4e-87 327.4 424 42.5
SGA_v2.0_scaffold24G10302 Striga asiatica HOM05D006203 ORTHO05D007675 3.2e-87 327.0 412 43.7
Sp1g32440 Schrenkiella parvula HOM05D006203 ORTHO05D007675 4.1e-87 326.6 419 42.2
AT1G43580 Arabidopsis thaliana HOM05D006203 ORTHO05D007675 5.4e-87 326.2 420 42.6
Lj4C698G9 Lonicera japonica HOM05D006203 ORTHO05D007675 5.4e-87 326.2 448 41.3
Nitab4.5_0001187g0150 Nicotiana tabacum HOM05D006203 ORTHO05D007675 5.4e-87 326.2 430 42.8
AL1G51640 Arabidopsis lyrata HOM05D006203 ORTHO05D007675 7.1e-87 325.9 405 43.2
Actinidia29535 Actinidia chinensis HOM05D006203 ORTHO05D007675 9.2e-87 325.5 439 42.6
BolC2t08473H Brassica oleracea HOM05D006203 ORTHO05D007675 1.2e-86 325.1 454 41.0
CiPaw.16G011200 Carya illinoinensis HOM05D006203 ORTHO05D007675 1.2e-86 325.1 417 44.1
Ca_10680_v3 Cicer arietinum L. HOM05D006203 ORTHO05D007675 1.2e-86 325.1 420 43.1
Zm00001eb243320 Zea mays HOM05D006203 ORTHO05D007675 1.2e-86 325.1 415 43.4
Zm00001eb062160 Zea mays HOM05D006203 ORTHO05D007675 1.6e-86 324.7 442 42.5
arahy.Tifrunner.gnm1.ann1.YI7QGP Arachis hypogaea HOM05D006203 ORTHO05D007675 2.1e-86 324.3 413 42.6
Thhalv10004157m.g Eutrema salsugineum HOM05D006203 ORTHO05D007675 2.1e-86 324.3 418 42.1
Potri.002G066900 Populus trichocarpa HOM05D006203 ORTHO05D007675 2.1e-86 324.3 417 44.4
PGR044G2231 Punica granatum HOM05D006203 ORTHO05D007675 2.1e-86 324.3 416 44.2
PGR100G0007 Punica granatum HOM05D006203 ORTHO05D007675 2.1e-86 324.3 416 44.2
QL02p038832 Quercus lobata HOM05D006203 ORTHO05D007675 2.1e-86 324.3 418 43.8
Migut.C00987 Erythranthe guttata HOM05D006203 ORTHO05D007675 2.7e-86 323.9 425 44.0
Psat1g027320 Pisum sativum HOM05D006203 ORTHO05D007675 3.5e-86 323.6 442 42.1
BcaC03g14869 Brassica carinata HOM05D006203 ORTHO05D007675 4.6e-86 323.2 427 41.7
A02p14450 Brassica napus HOM05D006203 ORTHO05D007675 4.6e-86 323.2 454 40.7
C02p23400 Brassica napus HOM05D006203 ORTHO05D007675 6.0e-86 322.8 427 41.7
Ciclev10001246m.g Citrus clementina HOM05D006203 ORTHO05D007675 7.8e-86 322.4 417 42.9
Lj5g0013006 Lotus japonicus HOM05D006203 ORTHO05D007675 1.0e-85 322.0 425 43.1
Nitab4.5_0002497g0040 Nicotiana tabacum HOM05D006203 ORTHO05D007675 1.3e-85 321.6 422 43.1
Potri.005G193300 Populus trichocarpa HOM05D006203 ORTHO05D007675 1.3e-85 321.6 425 44.0
BcaB07g33983 Brassica carinata HOM05D006203 ORTHO05D007675 1.7e-85 321.2 450 41.1
CSS0039383 Camellia sinensis var. sinensis HOM05D006203 ORTHO05D007675 1.7e-85 321.2 413 43.1
Glyma.20G167800 Glycine max HOM05D006203 ORTHO05D007675 1.7e-85 321.2 430 43.5
CSS0037443 Camellia sinensis var. sinensis HOM05D006203 ORTHO05D007675 2.3e-85 320.9 413 43.1
MD10G1028400 Malus domestica HOM05D006203 ORTHO05D007675 3.0e-85 320.5 427 43.6
DCAR_014434 Daucus carota HOM05D006203 ORTHO05D007675 3.9e-85 320.1 419 42.0
DCAR_014436 Daucus carota HOM05D006203 ORTHO05D007675 3.9e-85 320.1 419 42.0
COL.COLO4_29853 Corchorus olitorius HOM05D006203 ORTHO05D007675 6.6e-85 319.3 450 41.6
Sabra05G0147700 Salix brachista HOM05D006203 ORTHO05D007675 6.6e-85 319.3 412 44.2
SalBow7G3786 Salvia bowleyana HOM05D006203 ORTHO05D007675 8.6e-85 318.9 416 43.3
CAN.G1215.8 Capsicum annuum HOM05D006203 ORTHO05D007675 1.1e-84 318.5 422 43.1
Solyc04g071550.2 Solanum lycopersicum HOM05D006203 ORTHO05D007675 1.1e-84 318.5 413 43.6
AUR62026688 Chenopodium quinoa HOM05D006203 ORTHO05D007675 1.5e-84 318.2 421 41.6
ECA232G0861 Erigeron canadensis HOM05D006203 ORTHO05D007675 1.5e-84 318.2 421 43.5
TWI60G1081 Tripterygium wilfordii HOM05D006203 ORTHO05D007675 1.5e-84 318.2 432 42.1
EL10Ac1g01566 Beta vulgaris HOM05D006203 ORTHO05D007675 2.5e-84 317.4 422 42.2
CARHR035390 Cardamine hirsuta HOM05D006203 ORTHO05D007675 2.5e-84 317.4 405 41.7
Cpa.g.sc21.210 Carica papaya HOM05D006203 ORTHO05D007675 2.5e-84 317.4 420 43.6
Gohir.A02G112707 Gossypium hirsutum HOM05D006203 ORTHO05D007675 2.5e-84 317.4 412 42.5
Manes.02G180400 Manihot esculenta HOM05D006203 ORTHO05D007675 2.5e-84 317.4 423 43.3
Sopen04g027530 Solanum pennellii HOM05D006203 ORTHO05D007675 2.5e-84 317.4 413 43.3
CANSAT25G3154 Cannabis sativa HOM05D006203 ORTHO05D007675 3.3e-84 317.0 416 42.1
Gorai.002G055700 Gossypium raimondii HOM05D006203 ORTHO05D007675 4.3e-84 316.6 412 42.5
Medtr1g098650 Medicago truncatula HOM05D006203 ORTHO05D007675 4.3e-84 316.6 435 41.1
PSO017G3146 Papaver somniferum HOM05D006203 ORTHO05D007675 5.6e-84 316.2 414 42.3
PGSC0003DMG402024096 Solanum tuberosum HOM05D006203 ORTHO05D007675 5.6e-84 316.2 413 43.1
AUR62040604 Chenopodium quinoa HOM05D006203 ORTHO05D007675 7.3e-84 315.8 421 41.3
SalBow7G2343 Salvia bowleyana HOM05D006203 ORTHO05D007675 7.3e-84 315.8 416 43.0
PSO063G4112 Papaver somniferum HOM05D006203 ORTHO05D007675 9.5e-84 315.5 414 42.3
Gohir.D03G060606 Gossypium hirsutum HOM05D006203 ORTHO05D007675 1.6e-83 314.7 412 42.2
TPR.G17026 Trifolium pratense HOM05D006203 ORTHO05D007675 1.6e-83 314.7 427 41.5
THA.LOC104803037 Tarenaya hassleriana HOM05D006203 ORTHO05D007675 2.1e-83 314.3 405 43.5
Atru.chr13.2086 Acer truncatum HOM05D006203 ORTHO05D007675 8.1e-83 312.4 412 41.7
Aqoxy5G02059 Aquilegia oxysepala HOM05D006203 ORTHO05D007675 8.1e-83 312.4 405 41.5
ClCG08G002400 Citrullus lanatus HOM05D006203 ORTHO05D007675 8.1e-83 312.4 417 43.2
MELO3C025014.2 Cucumis melo HOM05D006203 ORTHO05D007675 8.1e-83 312.4 425 44.0
Lalb_Chr21g0305501 Lupinus albus HOM05D006203 ORTHO05D007675 8.1e-83 312.4 422 41.5
Rhsim04G0148800 Rhododendron simsii HOM05D006203 ORTHO05D007675 1.1e-82 312.0 425 42.6
Glyma.10G224051 Glycine max HOM05D006203 ORTHO05D007675 1.8e-82 311.2 413 42.1
MD05G1027600 Malus domestica HOM05D006203 ORTHO05D007675 6.8e-82 309.3 427 42.9
Os02g0543100 Oryza sativa ssp. japonica HOM05D006203 ORTHO05D007675 1.5e-81 308.1 414 41.8
Prupe.8G033400 Prunus persica HOM05D006203 ORTHO05D007675 1.5e-81 308.1 428 42.3
CsaV3_6G002690 Cucumis sativus L. HOM05D006203 ORTHO05D007675 2.6e-81 307.4 417 43.4
RcHm_v2.0_Chr6g0275101 Rosa chinensis HOM05D006203 ORTHO05D007675 2.6e-81 307.4 451 40.4
FAN15G3573 Fragaria x ananassa HOM05D006203 ORTHO05D007675 5.8e-81 306.2 435 41.8
Oeu002058.2 Olea europaea HOM05D006203 ORTHO05D007675 5.8e-81 306.2 444 40.5
FvH4_2g13470 Fragaria vesca HOM05D006203 ORTHO05D007675 1.3e-80 305.1 449 41.0
FAN24G2615 Fragaria x ananassa HOM05D006203 ORTHO05D007675 2.9e-80 303.9 435 41.6
GSVIVG01034547001 Vitis vinifera HOM05D006203 ORTHO05D007675 2.9e-80 303.9 408 42.2
Sed0022684 Sechium edule HOM05D006203 ORTHO05D007675 4.9e-80 303.1 423 40.7
FAN27G1038 Fragaria x ananassa HOM05D006203 ORTHO05D007675 6.4e-80 302.8 435 41.6
Oeu051272.1 Olea europaea HOM05D006203 ORTHO05D007675 2.7e-78 297.4 428 40.9
Ah.05g168000 Amaranthus hybridus HOM05D006203 ORTHO05D007675 4.7e-75 286.6 415 40.0
Hund17446 Selenicereus undatus HOM05D006203 ORTHO05D007675 6.2e-75 286.2 466 36.5
HPP92_014433 Vanilla planifolia HOM05D006203 ORTHO05D007675 6.2e-75 286.2 420 40.7
Peaxi162Scf00599g00123 Petunia axillaris HOM05D006203 ORTHO05D007675 8.9e-74 282.3 421 40.1
vmacro12408 Vaccinium macrocarpon HOM05D006203 ORTHO05D007675 2.2e-72 277.7 540 33.7
Haze_17763 Corylus avellana HOM05D006203 ORTHO05D007675 7.1e-71 272.7 332 44.6
Cc10_g14900 Coffea canephora HOM05D006203 ORTHO05D007675 6.0e-70 269.6 346 42.8
SHI09072 Sapria himalayana HOM05D006203 ORTHO05D007675 1.9e-68 264.6 315 45.7
unitig_82.g27121 Utricularia gibba HOM05D006203 ORTHO05D007675 4.4e-65 253.4 421 39.2
Sc02g0003970 Simmondsia chinensis HOM05D006203 ORTHO05D007675 4.2e-63 246.9 325 42.2
Sed0004557 Sechium edule HOM05D006203 ORTHO05D007675 3.1e-50 204.1 434 32.7
Dinv41071 Davidia involucrata HOM05D006203 ORTHO05D007675 6.9e-50 203.0 292 41.4
BcaC08g42813 Brassica carinata HOM05D006203 ORTHO05D007675 4.5e-49 200.3 361 33.0
Dinv41073 Davidia involucrata HOM05D006203 ORTHO05D007675 4.9e-48 196.8 262 43.5
Nn5g28766 Nelumbo nucifera HOM05D006203 ORTHO05D007675 4.3e-44 183.7 219 45.7
Zm00001eb440740 Zea mays HOM05D006203 ORTHO05D007675 8.2e-35 152.9 279 35.8
C06p00250 Brassica napus HOM05D006203 ORTHO05D007675 1.3e-32 145.6 182 41.2
MSTRG.1091 Avicennia marina HOM05D006203 ORTHO05D007675 5.7e-28 130.2 147 46.3
Cre01.g033050 Chlamydomonas reinhardtii HOM05D006203 ORTHO05D007675 6.1e-14 83.6 380 23.4
Dinv41070 Davidia involucrata HOM05D006203 ORTHO05D007675 6.7e-13 80.1 111 41.4
SHI09073 Sapria himalayana HOM05D006203 ORTHO05D007675 3.5e-09 67.8 92 41.3
BraA02t06509Z Brassica rapa HOM05D006203 ORTHO05D007675 7.7e-09 66.6 92 42.4
PGSC0003DMG401024096 Solanum tuberosum HOM05D006203 ORTHO05D007675 7.7e-09 66.6 92 42.4
Peaxi162Scf00599g00124 Petunia axillaris HOM05D006203 ORTHO05D007675 1.1e-07 62.8 90 40.0


User provided reference genes

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