Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CBR_g4734 Chara braunii HOM05D005631 ORTHO05D006765 1.4e-67 259.6 139 100.0
Pp3c4_18980 Physcomitrium patens HOM05D005631 ORTHO05D006765 2.6e-10 69.3 121 44.6
Sp6g20150 Schrenkiella parvula HOM05D000127 ORTHO05D007184 1.3e-09 67.0 108 43.5
BolC3t13878H Brassica oleracea HOM05D005631 ORTHO05D006765 2.2e-09 66.2 106 44.3
C09p50330 Brassica napus HOM05D005631 ORTHO05D006765 6.4e-09 64.7 106 43.4
A03p12230 Brassica napus HOM05D005631 ORTHO05D006765 8.4e-09 64.3 106 43.4
C03p14340 Brassica napus HOM05D005631 ORTHO05D006765 8.4e-09 64.3 106 43.4
BraA03t10534Z Brassica rapa HOM05D005631 ORTHO05D006765 8.4e-09 64.3 106 43.4
BraA10t43643Z Brassica rapa HOM05D005631 ORTHO05D006765 8.4e-09 64.3 106 43.4
CiPaw.13G069500 Carya illinoinensis HOM05D005631 ORTHO05D006765 1.1e-08 63.9 101 44.6
AL7G45820 Arabidopsis lyrata HOM05D005631 ORTHO05D006765 1.4e-08 63.5 106 43.4
Thecc.09G357600 Theobroma cacao HOM05D005631 ORTHO05D006765 1.4e-08 63.5 101 46.5
Atru.chr3.4122 Acer truncatum HOM05D005631 ORTHO05D006765 2.4e-08 62.8 103 43.7
BcaC04g19866 Brassica carinata HOM05D005631 ORTHO05D006765 2.4e-08 62.8 106 42.5
A10p15820 Brassica napus HOM05D005631 ORTHO05D006765 2.4e-08 62.8 106 42.5
BolC9t57889H Brassica oleracea HOM05D005631 ORTHO05D006765 2.4e-08 62.8 106 42.5
AT5G37055 Arabidopsis thaliana HOM05D005631 ORTHO05D006765 3.2e-08 62.4 106 43.4
Ciclev10029319m.g Citrus clementina HOM05D005631 ORTHO05D006765 3.2e-08 62.4 103 45.6
Gohir.A03G025600 Gossypium hirsutum HOM05D005631 ORTHO05D006765 3.2e-08 62.4 102 46.1
Gohir.D03G142900 Gossypium hirsutum HOM05D005631 ORTHO05D006765 3.2e-08 62.4 102 46.1
Gorai.003G150100 Gossypium raimondii HOM05D005631 ORTHO05D006765 3.2e-08 62.4 102 46.1
Aa31LG11G240 Aethionema arabicum HOM05D000127 ORTHO05D007184 4.2e-08 62.0 107 43.9
Thhalv10014837m.g Eutrema salsugineum HOM05D005631 ORTHO05D006765 4.2e-08 62.0 106 42.5
CSS0000896 Camellia sinensis var. sinensis HOM05D005631 ORTHO05D006765 5.4e-08 61.6 101 45.5
Cfa011776 Carpinus fangiana HOM05D005631 ORTHO05D006765 5.4e-08 61.6 104 47.1
Duzib150G1412 Durio zibethinus HOM05D005631 ORTHO05D006765 5.4e-08 61.6 101 46.5
Oeu059694.1 Olea europaea HOM05D005631 ORTHO05D006765 5.4e-08 61.6 102 45.1
Sed0015217 Sechium edule HOM05D005631 ORTHO05D006765 5.4e-08 61.6 101 46.5
SGA_v2.0_scaffold18G08260 Striga asiatica HOM05D005631 ORTHO05D006765 5.4e-08 61.6 101 44.6
Hund18954 Selenicereus undatus HOM05D000127 ORTHO05D006765 7.1e-08 61.2 100 43.0
PSO349G0142 Papaver somniferum HOM05D005631 ORTHO05D006765 9.3e-08 60.8 101 45.5
ATR0304G021 Amborella trichopoda HOM05D005631 ORTHO05D006765 1.2e-07 60.5 105 43.8
BcaB08g36180 Brassica carinata HOM05D005631 ORTHO05D006765 1.2e-07 60.5 106 41.5
Carub.0007s3232 Capsella rubella HOM05D005631 ORTHO05D006765 1.2e-07 60.5 103 39.8
CARHR272280 Cardamine hirsuta HOM05D005631 ORTHO05D006765 1.6e-07 60.1 102 45.1
Lsat_1_v5_gn_6_47101 Lactuca sativa HOM05D005631 ORTHO05D006765 1.6e-07 60.1 102 46.1
Os03g0367800 Oryza sativa ssp. japonica HOM05D005631 ORTHO05D006765 1.6e-07 60.1 101 44.6
Cpa.g.sc2.358 Carica papaya HOM05D005631 ORTHO05D006765 2.1e-07 59.7 101 44.6
ClCG02G019260 Citrullus lanatus HOM05D005631 ORTHO05D006765 2.1e-07 59.7 100 43.0
HanXRQChr10g0284941 Helianthus annuus HOM05D005631 ORTHO05D006765 2.1e-07 59.7 102 46.1
MELO3C025697.2 Cucumis melo HOM05D005631 ORTHO05D006765 2.7e-07 59.3 101 44.6
Migut.H00695 Erythranthe guttata HOM05D005631 ORTHO05D006765 2.7e-07 59.3 102 44.1
SGA_v2.0_scaffold20G09058 Striga asiatica HOM05D005631 ORTHO05D006765 2.7e-07 59.3 103 44.7
CsaV3_6G015890 Cucumis sativus L. HOM05D005631 ORTHO05D006765 3.5e-07 58.9 101 44.6
FvH4_3g39740 Fragaria vesca HOM05D005631 ORTHO05D006765 3.5e-07 58.9 100 42.0
FAN11G1428 Fragaria x ananassa HOM05D005631 ORTHO05D006765 3.5e-07 58.9 100 42.0
FAN16G0042 Fragaria x ananassa HOM05D005631 ORTHO05D006765 3.5e-07 58.9 100 42.0
BcaB01g04521 Brassica carinata HOM05D005631 ORTHO05D006765 4.6e-07 58.5 88 45.5
QL01p026260 Quercus lobata HOM05D005631 ORTHO05D006765 4.6e-07 58.5 106 45.3
Actinidia23857 Actinidia chinensis HOM05D005631 ORTHO05D006765 6.0e-07 58.2 101 45.5
RcHm_v2.0_Chr5g0071621 Rosa chinensis HOM05D005631 ORTHO05D006765 6.0e-07 58.2 100 42.0
SMO134G0149 Selaginella moellendorffii HOM05D005631 ORTHO05D006765 6.0e-07 58.2 107 45.8
Manes.02G211700 Manihot esculenta HOM05D005631 ORTHO05D006765 7.9e-07 57.8 101 44.6
TAR633G1157 Trochodendron aralioides HOM05D005631 ORTHO05D006765 1.0e-06 57.4 100 43.0
DCAR_004046 Daucus carota HOM05D005631 ORTHO05D006765 1.3e-06 57.0 101 43.6
FAN25G2299 Fragaria x ananassa HOM05D005631 ORTHO05D006765 1.3e-06 57.0 100 41.0
Rhsim01G0240900 Rhododendron simsii HOM05D005631 ORTHO05D006765 1.3e-06 57.0 101 46.5
FAN21G1424 Fragaria x ananassa HOM05D005631 ORTHO05D006765 1.7e-06 56.6 100 41.0
SalBow1G1570 Salvia bowleyana HOM05D005631 ORTHO05D006765 1.7e-06 56.6 101 42.6
vmacro14621 Vaccinium macrocarpon HOM05D005631 ORTHO05D006765 2.3e-06 56.2 101 44.6
Hma1.2p1_1586F.1_g292190 Hydrangea macrophylla HOM05D005631 ORTHO05D006765 3.9e-06 55.5 101 43.6
Lalb_Chr15g0083281 Lupinus albus HOM05D005631 ORTHO05D006765 3.9e-06 55.5 101 42.6
THA.LOC104810692 Tarenaya hassleriana HOM05D005631 ORTHO05D006765 3.9e-06 55.5 106 40.6
Zm00001eb195120 Zea mays HOM05D005631 ORTHO05D006765 3.9e-06 55.5 101 43.6
MSTRG.2645 Avicennia marina HOM05D005631 ORTHO05D006765 5.1e-06 55.1 100 43.0
MD03G1056300 Malus domestica HOM05D005631 ORTHO05D006765 5.1e-06 55.1 100 43.0
Mapoly0066s0110 Marchantia polymorpha HOM05D005631 ORTHO05D006765 5.1e-06 55.1 104 41.3
Potri.013G152600 Populus trichocarpa HOM05D005631 ORTHO05D006765 5.1e-06 55.1 101 44.6
Sabra13G0122700 Salix brachista HOM05D005631 ORTHO05D006765 5.1e-06 55.1 101 44.6
Ca_15008_v3 Cicer arietinum L. HOM05D005631 ORTHO05D006765 6.6e-06 54.7 101 41.6
Ca_15010_v3 Cicer arietinum L. HOM05D005631 ORTHO05D006765 6.6e-06 54.7 101 41.6
CANSAT54G1076 Cannabis sativa HOM05D005631 ORTHO05D006765 8.7e-06 54.3 103 42.7


User provided reference genes

Program Settings