Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CBR_g4593 Chara braunii HOM05D004947 ORTHO05D006077 0.0e+00 1476.8 790 100.0
CBR_g49522 Chara braunii HOM05D000019 ORTHO05D000048 5.7e-171 605.5 649 56.1
AagrBONN_evm.TU.Sc2ySwM_228.3588 Anthoceros agrestis HOM05D004947 ORTHO05D006077 1.3e-29 136.0 249 34.5
Mapoly0107s0002 Marchantia polymorpha HOM05D004947 ORTHO05D006077 1.9e-28 132.1 308 29.9
Pp3c21_530 Physcomitrium patens HOM05D004947 ORTHO05D006077 5.4e-28 130.6 248 31.5
SEGI_09258 Sequoiadendron giganteum HOM05D004947 ORTHO05D006077 1.5e-25 122.5 266 31.2
Mapoly0483s0001 Marchantia polymorpha HOM05D004947 ORTHO05D006077 3.3e-25 121.3 378 26.7
Pp3c22_5670 Physcomitrium patens HOM05D004947 ORTHO05D006077 3.3e-25 121.3 244 30.7
Atru.chr4.372 Acer truncatum HOM05D004947 ORTHO05D006077 8.1e-24 116.7 338 25.7
Atru.chr4.373 Acer truncatum HOM05D004947 ORTHO05D006077 8.1e-24 116.7 338 25.7
Medtr3g094760 Medicago truncatula HOM05D004947 ORTHO05D006077 2.0e-22 112.1 333 26.7
CsaV3_6G045960 Cucumis sativus L. HOM05D004947 ORTHO05D006077 7.6e-22 110.2 295 27.5
PGSC0003DMG402012957 Solanum tuberosum HOM05D004947 ORTHO05D006077 7.6e-22 110.2 318 28.6
PGR102G0173 Punica granatum HOM05D004947 ORTHO05D006077 9.9e-22 109.8 309 28.2
TAR625G0980 Trochodendron aralioides HOM05D004947 ORTHO05D006077 9.9e-22 109.8 299 27.1
Mapoly0002s0001 Marchantia polymorpha HOM05D004947 ORTHO05D006077 1.3e-21 109.4 295 29.8
Sc03g0004250 Simmondsia chinensis HOM05D004947 ORTHO05D006077 1.3e-21 109.4 318 30.2
Sopen04g023630 Solanum pennellii HOM05D004947 ORTHO05D006077 2.9e-21 108.2 332 28.9
Ca_16888_v3 Cicer arietinum L. HOM05D004947 ORTHO05D006077 3.8e-21 107.8 333 27.3
TPR.G6951 Trifolium pratense HOM05D004947 ORTHO05D006077 3.8e-21 107.8 333 25.8
QL06p032353 Quercus lobata HOM05D004947 ORTHO05D006077 4.9e-21 107.5 296 27.7
Manes.13G077600 Manihot esculenta HOM05D004947 ORTHO05D006077 6.4e-21 107.1 316 27.5
Ciclev10025244m.g Citrus clementina HOM05D004947 ORTHO05D006077 1.1e-20 106.3 336 26.2
Manes.12G141400 Manihot esculenta HOM05D004947 ORTHO05D006077 1.1e-20 106.3 296 28.0
HPP92_005876 Vanilla planifolia HOM05D004947 ORTHO05D006077 1.1e-20 106.3 295 29.5
Peaxi162Scf01006g00315 Petunia axillaris HOM05D004947 ORTHO05D006077 1.4e-20 105.9 317 28.4
TAR376G0315 Trochodendron aralioides HOM05D004947 ORTHO05D006077 1.4e-20 105.9 315 26.7
CiPaw.04G092600 Carya illinoinensis HOM05D004947 ORTHO05D006077 2.4e-20 105.1 315 27.6
DCAR_014256 Daucus carota HOM05D004947 ORTHO05D006077 2.4e-20 105.1 298 29.5
Lj1g0026570 Lotus japonicus HOM05D004947 ORTHO05D006077 2.4e-20 105.1 333 26.1
Nitab4.5_0002843g0020 Nicotiana tabacum HOM05D004947 ORTHO05D006077 2.4e-20 105.1 341 27.6
Prupe.6G175000 Prunus persica HOM05D004947 ORTHO05D006077 2.4e-20 105.1 324 25.9
ATR0171G039 Amborella trichopoda HOM05D004947 ORTHO05D006077 3.2e-20 104.8 294 27.9
Oeu056486.1 Olea europaea HOM05D004947 ORTHO05D006077 3.2e-20 104.8 332 27.7
Duzib147G0355 Durio zibethinus HOM05D004947 ORTHO05D006077 4.2e-20 104.4 324 28.1
Gohir.D03G045400 Gossypium hirsutum HOM05D004947 ORTHO05D006077 4.2e-20 104.4 334 25.7
CiPaw.03G134900 Carya illinoinensis HOM05D004947 ORTHO05D006077 5.4e-20 104.0 296 27.4
SGA_v2.0_scaffold47G17714 Striga asiatica HOM05D004947 ORTHO05D006077 5.4e-20 104.0 309 27.5
CDE05G2725 Ceratophyllum demersum HOM05D004947 ORTHO05D006077 7.1e-20 103.6 348 25.0
FvH4_1g24620 Fragaria vesca HOM05D004947 ORTHO05D006077 7.1e-20 103.6 294 28.9
SalBow5G4162 Salvia bowleyana HOM05D004947 ORTHO05D006077 9.3e-20 103.2 242 30.6
CANSAT01G0537 Cannabis sativa HOM05D004947 ORTHO05D006077 1.2e-19 102.8 327 26.0
CAN.G1854.1 Capsicum annuum HOM05D004947 ORTHO05D006077 1.2e-19 102.8 342 26.9
vmacro12909 Vaccinium macrocarpon HOM05D004947 ORTHO05D006077 1.2e-19 102.8 299 27.4
FAN19G2885 Fragaria x ananassa HOM05D004947 ORTHO05D006077 1.6e-19 102.4 276 29.3
Lj4A878G34 Lonicera japonica HOM05D004947 ORTHO05D006077 1.6e-19 102.4 320 26.9
Eucgr.H04830 Eucalyptus grandis HOM05D004947 ORTHO05D006077 2.1e-19 102.1 324 27.8
Solyc04g054170.4 Solanum lycopersicum HOM05D004947 ORTHO05D006077 2.1e-19 102.1 354 28.0
TPR.G2194 Trifolium pratense HOM05D004947 ORTHO05D006077 2.1e-19 102.1 345 24.9
Cfa002745 Carpinus fangiana HOM05D004947 ORTHO05D006077 2.7e-19 101.7 294 27.6
Gorai.003G046500 Gossypium raimondii HOM05D004947 ORTHO05D006077 2.7e-19 101.7 334 25.4
Psat7g052040 Pisum sativum HOM05D004947 ORTHO05D006077 2.7e-19 101.7 304 28.0
Ca_17699_v3 Cicer arietinum L. HOM05D004947 ORTHO05D006077 3.5e-19 101.3 318 25.5
Gohir.A02G134000 Gossypium hirsutum HOM05D004947 ORTHO05D006077 3.5e-19 101.3 334 25.1
Nitab4.5_0000156g0160 Nicotiana tabacum HOM05D004947 ORTHO05D006077 3.5e-19 101.3 318 27.4
Lalb_Chr11g0068011 Lupinus albus HOM05D004947 ORTHO05D006077 6.0e-19 100.5 333 25.2
Thecc.01G111600 Theobroma cacao HOM05D004947 ORTHO05D006077 7.8e-19 100.1 296 26.7
SalBow5G3891 Salvia bowleyana HOM05D004947 ORTHO05D006077 1.0e-18 99.8 193 33.2
Dinv42703 Davidia involucrata HOM05D004947 ORTHO05D006077 1.3e-18 99.4 334 26.3
ClCG01G019270 Citrullus lanatus HOM05D004947 ORTHO05D006077 2.3e-18 98.6 350 27.1
Lsat_1_v5_gn_2_65461 Lactuca sativa HOM05D004947 ORTHO05D006077 3.0e-18 98.2 296 29.4
Sed0009808 Sechium edule HOM05D004947 ORTHO05D006077 3.0e-18 98.2 306 26.5
FAN26G0674 Fragaria x ananassa HOM05D004947 ORTHO05D006077 3.9e-18 97.8 294 27.6
RcHm_v2.0_Chr2g0116221 Rosa chinensis HOM05D004947 ORTHO05D006077 3.9e-18 97.8 295 26.4
arahy.Tifrunner.gnm1.ann1.V2ZAQJ Arachis hypogaea HOM05D004947 ORTHO05D006077 5.1e-18 97.4 333 24.3
Psat5g067160 Pisum sativum HOM05D004947 ORTHO05D006077 5.1e-18 97.4 334 25.4
Rhsim10G0151500 Rhododendron simsii HOM05D004947 ORTHO05D006077 5.1e-18 97.4 316 25.3
arahy.Tifrunner.gnm1.ann1.XRAY4T Arachis hypogaea HOM05D004947 ORTHO05D006077 1.1e-17 96.3 333 24.0
COL.COLO4_11020 Corchorus olitorius HOM05D004947 ORTHO05D006077 1.1e-17 96.3 333 24.0
HanXRQChr14g0446211 Helianthus annuus HOM05D004947 ORTHO05D006077 1.1e-17 96.3 319 27.0
unitig_88.g27735 Utricularia gibba HOM05D004947 ORTHO05D006077 1.1e-17 96.3 316 27.5
MBI03_g11138_MAGBIO Magnolia biondii HOM05D004947 ORTHO05D006077 1.5e-17 95.9 312 26.0
Nn1g00054 Nelumbo nucifera HOM05D004947 ORTHO05D006077 1.5e-17 95.9 335 26.0
AUR62003314 Chenopodium quinoa HOM05D004947 ORTHO05D006077 2.5e-17 95.1 309 26.9
CBR_g49521 Chara braunii HOM05D000019 ORTHO05D000048 3.3e-17 94.7 96 56.2
PSO675G5310 Papaver somniferum HOM05D004947 ORTHO05D006077 3.3e-17 94.7 332 24.7
PSO541G1244 Papaver somniferum HOM05D004947 ORTHO05D006077 4.3e-17 94.4 363 24.8
Ah.02g124420 Amaranthus hybridus HOM05D004947 ORTHO05D006077 5.6e-17 94.0 319 26.3
ECA238G1011 Erigeron canadensis HOM05D004947 ORTHO05D006077 5.6e-17 94.0 269 29.0
Hund19664 Selenicereus undatus HOM05D004947 ORTHO05D006077 5.6e-17 94.0 259 29.7
TWI53G2111 Tripterygium wilfordii HOM05D004947 ORTHO05D006077 7.3e-17 93.6 299 29.1
TWI74G1183 Tripterygium wilfordii HOM05D004947 ORTHO05D006077 7.3e-17 93.6 295 29.2
Aqoxy5G01985_Aqoxy5G01986 Aquilegia oxysepala HOM05D004947 ORTHO05D006077 9.6e-17 93.2 293 29.0
MELO3C007803.2 Cucumis melo HOM05D004947 ORTHO05D006077 9.6e-17 93.2 175 30.9
Phvul.009G140300 Phaseolus vulgaris HOM05D004947 ORTHO05D006077 1.3e-16 92.8 224 28.6
MELO3C007802.2 Cucumis melo HOM05D004947 ORTHO05D006077 1.6e-16 92.4 295 27.5
FAN28G2993 Fragaria x ananassa HOM05D004947 ORTHO05D006077 2.8e-16 91.7 298 25.8
Migut.L00078 Erythranthe guttata HOM05D004947 ORTHO05D006077 3.6e-16 91.3 296 26.4
SHI11672 Sapria himalayana HOM05D004947 ORTHO05D006077 4.8e-16 90.9 300 28.3
HanXRQChr15g0471901 Helianthus annuus HOM05D004947 ORTHO05D006077 8.1e-16 90.1 323 26.0
Cc07_g16050 Coffea canephora HOM05D004947 ORTHO05D006077 1.1e-15 89.7 317 27.1
Glyma.06G145800 Glycine max HOM05D004947 ORTHO05D006077 2.4e-15 88.6 329 24.0
THA.LOC104818481 Tarenaya hassleriana HOM05D004947 ORTHO05D006077 4.0e-15 87.8 307 25.7
Zm00001eb364640 Zea mays HOM05D004947 ORTHO05D006077 1.2e-14 86.3 294 24.5
EL10Ac6g14744 Beta vulgaris HOM05D004947 ORTHO05D006077 1.3e-13 82.8 417 24.9
Actinidia16961 Actinidia chinensis HOM05D004947 ORTHO05D006077 1.7e-13 82.4 296 24.7
Potri.005G083600 Populus trichocarpa HOM05D004947 ORTHO05D006077 4.9e-13 80.9 310 24.2
FAN23G3004 Fragaria x ananassa HOM05D004947 ORTHO05D006077 6.4e-13 80.5 501 22.0
Os02g0770100 Oryza sativa ssp. japonica HOM05D004947 ORTHO05D006077 6.4e-13 80.5 299 25.1
MD01G1017700 Malus domestica HOM05D004947 ORTHO05D006077 8.4e-13 80.1 322 25.5
BolC3t18387H Brassica oleracea HOM05D004947 ORTHO05D006077 1.1e-12 79.7 333 23.4
Nn1g05196 Nelumbo nucifera HOM05D004947 ORTHO05D006077 1.1e-12 79.7 153 28.8
BraA06t26105Z Brassica rapa HOM05D004947 ORTHO05D006077 1.9e-12 79.0 327 23.2
BcaC01g02724 Brassica carinata HOM05D004947 ORTHO05D006077 2.4e-12 78.6 333 23.4
C03p61260 Brassica napus HOM05D004947 ORTHO05D006077 2.4e-12 78.6 333 23.4
AL8G42430 Arabidopsis lyrata HOM05D004947 ORTHO05D006077 3.2e-12 78.2 331 23.9
Sabra07G0068900 Salix brachista HOM05D004947 ORTHO05D006077 3.2e-12 78.2 296 24.7
Cpa.g.sc196.3 Carica papaya HOM05D004947 ORTHO05D006077 4.2e-12 77.8 153 28.1
A06p31700 Brassica napus HOM05D004947 ORTHO05D006077 7.1e-12 77.0 327 22.6
VMungo1309G0633 Vigna mungo HOM05D004947 ORTHO05D006077 9.3e-12 76.6 141 29.1
BcaB02g09842 Brassica carinata HOM05D004947 ORTHO05D006077 1.6e-11 75.9 327 22.6
Sp2g28010 Schrenkiella parvula HOM05D004947 ORTHO05D006077 1.1e-09 69.7 327 23.5
SGA_v2.0_scaffold47G17717 Striga asiatica HOM05D004947 ORTHO05D006077 1.1e-09 69.7 98 35.7
Aa31LG1G17040 Aethionema arabicum HOM05D004947 ORTHO05D006077 2.5e-09 68.6 300 23.0
BcaB04g20000 Brassica carinata HOM05D004947 ORTHO05D006077 5.6e-09 67.4 263 24.7
Carub.0008s2576 Capsella rubella HOM05D004947 ORTHO05D006077 9.6e-09 66.6 252 23.4
MCO05G196 Micromonas commoda HOM05D004947 ORTHO05D006077 1.3e-08 66.2 248 27.4
AT5G64930 Arabidopsis thaliana HOM05D004947 ORTHO05D006077 1.6e-08 65.9 289 22.5
CARHR293840 Cardamine hirsuta HOM05D004947 ORTHO05D006077 2.4e-07 62.0 373 21.2
Thhalv10003912m.g Eutrema salsugineum HOM05D004947 ORTHO05D006077 1.2e-06 59.7 263 24.0
CBR_g52031 Chara braunii HOM05D001161 ORTHO05D000497 5.8e-06 57.4 49 63.3
AUR62016269 Chenopodium quinoa HOM05D004947 ORTHO05D006077 9.9e-06 56.6 222 26.6


User provided reference genes

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