Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CBR_g45648 Chara braunii HOM05D005762 ORTHO05D006823 3.4e-107 391.7 208 100.0
CBR_g3032 Chara braunii HOM05D005762 ORTHO05D006823 2.3e-39 166.4 92 97.8
SEGI_01916 Sequoiadendron giganteum HOM05D005762 ORTHO05D006823 1.9e-33 146.7 208 49.5
AagrBONN_evm.TU.Sc2ySwM_344.3285 Anthoceros agrestis HOM05D005762 ORTHO05D006823 1.1e-31 141.0 204 47.5
CDE02G2562 Ceratophyllum demersum HOM05D005762 ORTHO05D006823 2.4e-31 139.8 208 46.6
PSO761G0310 Papaver somniferum HOM05D005762 ORTHO05D006823 3.1e-31 139.4 195 46.7
HPP92_021390 Vanilla planifolia HOM05D005762 ORTHO05D006823 8.9e-31 137.9 210 46.2
Solyc04g071310.3 Solanum lycopersicum HOM05D005762 ORTHO05D006823 1.2e-30 137.5 207 45.9
Sopen04g027270 Solanum pennellii HOM05D005762 ORTHO05D006823 1.5e-30 137.1 207 45.9
PGSC0003DMG400024111 Solanum tuberosum HOM05D005762 ORTHO05D006823 2.0e-30 136.7 207 46.4
TAR625G0504 Trochodendron aralioides HOM05D005762 ORTHO05D006823 2.0e-30 136.7 209 45.5
Mapoly0025s0086 Marchantia polymorpha HOM05D005762 ORTHO05D006823 2.6e-30 136.3 201 48.3
ATR0767G248 Amborella trichopoda HOM05D005762 ORTHO05D006823 4.4e-30 135.6 207 45.4
CAN.G268.6 Capsicum annuum HOM05D005762 ORTHO05D006823 4.4e-30 135.6 193 46.6
Prupe.7G266400 Prunus persica HOM05D005762 ORTHO05D006823 4.4e-30 135.6 207 46.4
SGA_v2.0_scaffold118G32537 Striga asiatica HOM05D005762 ORTHO05D006823 4.4e-30 135.6 207 44.4
MSTRG.25456 Avicennia marina HOM05D005762 ORTHO05D006823 9.9e-30 134.4 211 46.0
ClCG06G012630 Citrullus lanatus HOM05D005762 ORTHO05D006823 9.9e-30 134.4 203 44.8
Sed0006648 Sechium edule HOM05D005762 ORTHO05D006823 9.9e-30 134.4 207 45.9
Zm00001eb215170 Zea mays HOM05D005762 ORTHO05D006823 2.2e-29 133.3 195 44.6
Zm00001eb375400 Zea mays HOM05D005762 ORTHO05D006823 2.2e-29 133.3 195 44.6
CDE06G1965 Ceratophyllum demersum HOM05D005762 ORTHO05D006823 2.9e-29 132.9 205 43.9
Nitab4.5_0000032g0060 Nicotiana tabacum HOM05D005762 ORTHO05D006823 2.9e-29 132.9 191 47.6
Nn8g40046 Nelumbo nucifera HOM05D005762 ORTHO05D006823 6.4e-29 131.7 196 45.4
Manes.14G112900 Manihot esculenta HOM05D005762 ORTHO05D006823 8.4e-29 131.3 200 46.0
PSO357G0319 Papaver somniferum HOM05D005762 ORTHO05D006823 1.4e-28 130.6 196 43.9
SalBow7G3475 Salvia bowleyana HOM05D005762 ORTHO05D006823 1.4e-28 130.6 205 44.9
Os11g0473100 Oryza sativa ssp. japonica HOM05D005762 ORTHO05D006823 1.9e-28 130.2 196 43.9
TWI34G1522 Tripterygium wilfordii HOM05D005762 ORTHO05D006823 3.2e-28 129.4 205 42.9
PSO170G6399 Papaver somniferum HOM05D005762 ORTHO05D006823 4.2e-28 129.0 196 43.9
arahy.Tifrunner.gnm1.ann1.0D8FTQ Arachis hypogaea HOM05D005762 ORTHO05D006823 5.4e-28 128.6 196 43.9
Lj2g0011355 Lotus japonicus HOM05D005762 ORTHO05D006823 7.1e-28 128.3 208 43.3
Lalb_Chr05g0215351 Lupinus albus HOM05D005762 ORTHO05D006823 7.1e-28 128.3 205 42.4
Aqoxy6G02656 Aquilegia oxysepala HOM05D005762 ORTHO05D006823 1.6e-27 127.1 207 41.1
Ciclev10009604m.g Citrus clementina HOM05D005762 ORTHO05D006823 1.6e-27 127.1 204 42.6
Peaxi162Scf00765g00313 Petunia axillaris HOM05D005762 ORTHO05D006823 1.6e-27 127.1 204 44.6
unitig_0.g206 Utricularia gibba HOM05D005762 ORTHO05D006823 2.1e-27 126.7 192 44.8
BcaB03g12662 Brassica carinata HOM05D005762 ORTHO05D006823 2.7e-27 126.3 207 42.0
Sed0007428 Sechium edule HOM05D005762 ORTHO05D006823 4.6e-27 125.6 206 43.7
Gohir.A12G083500 Gossypium hirsutum HOM05D005762 ORTHO05D006823 6.0e-27 125.2 206 41.7
Lsat_1_v5_gn_7_49601 Lactuca sativa HOM05D005762 ORTHO05D006823 6.0e-27 125.2 197 46.2
TWI63G0575 Tripterygium wilfordii HOM05D005762 ORTHO05D006823 6.0e-27 125.2 205 42.0
arahy.Tifrunner.gnm1.ann1.3SV7H4 Arachis hypogaea HOM05D005762 ORTHO05D006823 7.8e-27 124.8 196 43.4
Duzib147G0575 Durio zibethinus HOM05D005762 ORTHO05D006823 7.8e-27 124.8 207 42.5
Rhsim01G0024500 Rhododendron simsii HOM05D005762 ORTHO05D006823 1.0e-26 124.4 198 44.9
Dinv42823 Davidia involucrata HOM05D005762 ORTHO05D006823 1.7e-26 123.6 208 41.3
Dinv43277 Davidia involucrata HOM05D005762 ORTHO05D006823 1.7e-26 123.6 208 41.3
Gohir.D12G082500 Gossypium hirsutum HOM05D005762 ORTHO05D006823 1.7e-26 123.6 207 42.0
Cc00_g06610 Coffea canephora HOM05D005762 ORTHO05D006823 2.3e-26 123.2 207 40.6
Migut.C01281 Erythranthe guttata HOM05D005762 ORTHO05D006823 2.3e-26 123.2 197 43.1
vmacro06054 Vaccinium macrocarpon HOM05D005762 ORTHO05D006823 3.9e-26 122.5 213 41.3
MELO3C010201.2 Cucumis melo HOM05D005762 ORTHO05D006823 5.1e-26 122.1 203 44.8
Gorai.008G090500 Gossypium raimondii HOM05D005762 ORTHO05D006823 6.6e-26 121.7 207 41.5
Lalb_Chr16g0380631 Lupinus albus HOM05D005762 ORTHO05D006823 8.7e-26 121.3 206 42.2
unitig_60.g25712 Utricularia gibba HOM05D005762 ORTHO05D006823 8.7e-26 121.3 205 42.9
Pp3c7_18190 Physcomitrium patens HOM05D005762 ORTHO05D006823 1.5e-25 120.6 192 41.1
Atru.chr7.1163 Acer truncatum HOM05D005762 ORTHO05D006823 1.9e-25 120.2 207 41.1
Psat1g057520 Pisum sativum HOM05D005762 ORTHO05D006823 1.9e-25 120.2 192 42.7
Sp7g28690 Schrenkiella parvula HOM05D005762 ORTHO05D006823 1.9e-25 120.2 207 41.5
HanXRQChr03g0066031 Helianthus annuus HOM05D005762 ORTHO05D006823 2.5e-25 119.8 207 43.5
COL.COLO4_27292 Corchorus olitorius HOM05D005762 ORTHO05D006823 3.3e-25 119.4 207 41.5
Glyma.19G036900 Glycine max HOM05D005762 ORTHO05D006823 3.3e-25 119.4 203 42.4
GSVIVG01023684001 Vitis vinifera HOM05D005762 ORTHO05D006823 3.3e-25 119.4 207 41.1
DCAR_014801 Daucus carota HOM05D005762 ORTHO05D006823 4.3e-25 119.0 205 41.5
Eucgr.C02513 Eucalyptus grandis HOM05D005762 ORTHO05D006823 4.3e-25 119.0 197 43.1
Eucgr.L01546 Eucalyptus grandis HOM05D005762 ORTHO05D006823 4.3e-25 119.0 197 43.1
HanXRQChr09g0244521 Helianthus annuus HOM05D005762 ORTHO05D006823 4.3e-25 119.0 197 43.1
THA.LOC104814737 Tarenaya hassleriana HOM05D005762 ORTHO05D006823 4.3e-25 119.0 207 42.5
CiPaw.16G107100 Carya illinoinensis HOM05D005762 ORTHO05D006823 5.6e-25 118.6 207 40.6
Thecc.01G095900 Theobroma cacao HOM05D005762 ORTHO05D006823 5.6e-25 118.6 207 40.6
AT4G30820 Arabidopsis thaliana HOM05D005762 ORTHO05D006823 9.6e-25 117.9 204 40.2
MBI02_g32399_MAGBIO Magnolia biondii HOM05D005762 ORTHO05D006823 9.6e-25 117.9 202 42.1
PGR102G1062 Punica granatum HOM05D005762 ORTHO05D006823 9.6e-25 117.9 204 41.7
SHI02837 Sapria himalayana HOM05D005762 ORTHO05D006823 9.6e-25 117.9 204 42.6
SMO356G0316 Selaginella moellendorffii HOM05D005762 ORTHO05D006823 9.6e-25 117.9 194 45.4
Hma1.2p1_0222F.1_g093870 Hydrangea macrophylla HOM05D005762 ORTHO05D006823 1.2e-24 117.5 208 39.9
MD15G1148500 Malus domestica HOM05D005762 ORTHO05D006823 1.2e-24 117.5 209 41.1
Os06g0171700 Oryza sativa ssp. japonica HOM05D005762 ORTHO05D006823 1.2e-24 117.5 210 41.0
QL02p094110 Quercus lobata HOM05D005762 ORTHO05D006823 1.2e-24 117.5 207 39.6
DCAR_019992 Daucus carota HOM05D005762 ORTHO05D006823 1.6e-24 117.1 196 40.3
Medtr6g006900 Medicago truncatula HOM05D005762 ORTHO05D006823 2.1e-24 116.7 202 40.6
CARHR238660 Cardamine hirsuta HOM05D005762 ORTHO05D006823 3.6e-24 115.9 202 40.1
Phvul.004G044600 Phaseolus vulgaris HOM05D005762 ORTHO05D006823 4.7e-24 115.5 205 40.0
C03p88490 Brassica napus HOM05D005762 ORTHO05D006823 6.2e-24 115.2 207 39.6
Actinidia24370 Actinidia chinensis HOM05D000058 ORTHO05D000077 8.1e-24 114.8 198 41.4
Carub.0007s0975 Capsella rubella HOM05D005762 ORTHO05D006823 8.1e-24 114.8 202 40.6
Potri.006G180900 Populus trichocarpa HOM05D005762 ORTHO05D006823 8.1e-24 114.8 194 42.3
TPR.G14135 Trifolium pratense HOM05D005762 ORTHO05D006823 8.1e-24 114.8 192 41.7
BraA08t33867Z Brassica rapa HOM05D005762 ORTHO05D006823 1.1e-23 114.4 202 39.1
CSS0036647 Camellia sinensis var. sinensis HOM05D005762 ORTHO05D006823 1.8e-23 113.6 196 43.4
Sabra06G0137900 Salix brachista HOM05D005762 ORTHO05D006823 1.8e-23 113.6 206 43.2
Ca_04188_v3 Cicer arietinum L. HOM05D005762 ORTHO05D006823 3.1e-23 112.8 194 41.2
CSS0014952 Camellia sinensis var. sinensis HOM05D005762 ORTHO05D006823 2.0e-22 110.2 205 40.0
Cpa.g.sc199.22 Carica papaya HOM05D005762 ORTHO05D006823 2.0e-22 110.2 193 40.4
FvH4_1g00560 Fragaria vesca HOM05D005762 ORTHO05D006823 4.4e-22 109.0 200 40.5
CANSAT11G0529 Cannabis sativa HOM05D005762 ORTHO05D006823 1.3e-21 107.5 201 37.8
Lj2g0017040 Lotus japonicus HOM05D005762 ORTHO05D006823 1.3e-21 107.5 186 43.0
RcHm_v2.0_Chr2g0085191 Rosa chinensis HOM05D005762 ORTHO05D006823 1.7e-21 107.1 202 38.1
VMungo1215G2009 Vigna mungo HOM05D005762 ORTHO05D006823 2.2e-21 106.7 184 41.8
BcaNung02738 Brassica carinata HOM05D005762 ORTHO05D006823 4.9e-21 105.5 220 38.2
FAN26G0640 Fragaria x ananassa HOM05D005762 ORTHO05D006823 6.4e-21 105.1 197 38.1
Potri.018G103200 Populus trichocarpa HOM05D005762 ORTHO05D006823 8.4e-21 104.8 205 39.5
BcaC01g01136 Brassica carinata HOM05D005762 ORTHO05D006823 1.9e-20 103.6 202 37.1
Haze_19144 Corylus avellana HOM05D005762 ORTHO05D006823 1.9e-20 103.6 199 42.2
Sabra18G0088700 Salix brachista HOM05D000058 ORTHO05D000077 1.2e-19 100.9 185 41.1
ECA240G2400 Erigeron canadensis HOM05D006258 ORTHO05D007961 3.5e-19 99.4 181 42.5
A03p60360 Brassica napus HOM05D005762 ORTHO05D006823 4.6e-19 99.0 202 37.6
C07p58230 Brassica napus HOM05D000058 ORTHO05D000077 4.6e-19 99.0 202 37.6
BolC7t46281H Brassica oleracea HOM05D000058 ORTHO05D000077 4.6e-19 99.0 202 37.6
EL10Ac8g18914 Beta vulgaris HOM05D005762 ORTHO05D006823 6.0e-19 98.6 83 62.7
A08p19060 Brassica napus HOM05D005762 ORTHO05D006823 1.0e-18 97.8 230 33.9
SGA_v2.0_scaffold69G23111 Striga asiatica HOM05D005762 ORTHO05D006823 5.1e-18 95.5 228 36.4
BcaNung01558 Brassica carinata HOM05D005762 ORTHO05D006823 1.9e-17 93.6 217 35.5
Oeu026957.1 Olea europaea HOM05D005762 ORTHO05D006823 2.5e-17 93.2 109 53.2
AUR62025367 Chenopodium quinoa HOM05D005762 ORTHO05D006823 9.6e-17 91.3 83 59.0
AUR62028383 Chenopodium quinoa HOM05D005762 ORTHO05D006823 2.1e-16 90.1 83 57.8
vmacro13053 Vaccinium macrocarpon HOM05D005762 ORTHO05D006823 2.8e-16 89.7 67 70.1
SMO004G0001 Selaginella moellendorffii HOM05D028982 ORTHO05D006823 1.8e-15 87.0 74 59.5
CsaV3_1G029180 Cucumis sativus L. HOM05D005762 ORTHO05D006823 4.5e-14 82.4 59 67.8
BraA03t15075Z Brassica rapa HOM05D005762 ORTHO05D006823 1.3e-13 80.9 179 35.8
Sc18g0003110 Simmondsia chinensis HOM05D005762 ORTHO05D006823 2.2e-13 80.1 154 40.9
Dinv41344 Davidia involucrata HOM05D005762 ORTHO05D006823 8.4e-13 78.2 157 40.1
MCO02G015 Micromonas commoda HOM05D005762 ORTHO05D006823 8.4e-13 78.2 74 59.5
SGA_v2.0_scaffold63G21769 Striga asiatica HOM05D005762 ORTHO05D006823 2.7e-11 73.2 76 53.9
Thhalv10026542m.g Eutrema salsugineum HOM05D005762 ORTHO05D006823 5.1e-10 68.9 156 34.6
Lj9A721G60 Lonicera japonica HOM05D005762 ORTHO05D006823 6.7e-10 68.6 160 38.1
Cre16.g672753 Chlamydomonas reinhardtii HOM05D005762 ORTHO05D006823 1.5e-09 67.4 189 31.2
Rhsim03G0259100 Rhododendron simsii HOM05D005762 ORTHO05D006823 2.5e-09 66.6 159 34.6
BolC3t21157H Brassica oleracea HOM05D005762 ORTHO05D006823 1.3e-08 64.3 172 33.7
AL7G21310 Arabidopsis lyrata HOM05D005762 ORTHO05D006823 4.8e-08 62.4 162 32.1
Rhsim01G0060600 Rhododendron simsii HOM05D005762 ORTHO05D006823 3.1e-07 59.7 93 46.2
THA.LOC104804493 Tarenaya hassleriana HOM05D005762 ORTHO05D006823 6.9e-07 58.5 154 35.7


User provided reference genes

Program Settings