Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CBR_g45569 Chara braunii HOM05D005896 ORTHO05D007250 6.3e-171 604.0 300 100.0
Aqoxy2G00762 Aquilegia oxysepala HOM05D005896 ORTHO05D007250 5.6e-58 228.8 216 52.3
Cc06_g00650 Coffea canephora HOM05D005896 ORTHO05D007250 1.2e-57 227.6 216 52.3
AagrBONN_evm.TU.Sc2ySwM_362.2825 Anthoceros agrestis HOM05D005896 ORTHO05D007250 4.7e-57 225.7 216 53.7
Zm00001eb111890 Zea mays HOM05D005896 ORTHO05D007250 4.7e-57 225.7 217 51.2
Nn2g11051 Nelumbo nucifera HOM05D005896 ORTHO05D007250 1.0e-56 224.6 217 53.0
HPP92_013866 Vanilla planifolia HOM05D005896 ORTHO05D007250 1.8e-56 223.8 216 50.9
Nitab4.5_0001703g0070 Nicotiana tabacum HOM05D005896 ORTHO05D007250 2.3e-56 223.4 235 48.5
Os07g0691200 Oryza sativa ssp. japonica HOM05D005896 ORTHO05D007250 3.0e-56 223.0 217 51.6
CSS0019926 Camellia sinensis var. sinensis HOM05D005896 ORTHO05D007250 4.0e-56 222.6 217 50.2
CSS0029745 Camellia sinensis var. sinensis HOM05D005896 ORTHO05D007250 4.0e-56 222.6 217 50.2
Eucgr.A00643 Eucalyptus grandis HOM05D005896 ORTHO05D007250 4.0e-56 222.6 216 50.9
Nitab4.5_0004057g0040 Nicotiana tabacum HOM05D005896 ORTHO05D007250 4.0e-56 222.6 235 48.5
Sabra06G0082600 Salix brachista HOM05D005896 ORTHO05D007250 4.0e-56 222.6 216 51.4
TWI77G0262 Tripterygium wilfordii HOM05D005896 ORTHO05D007250 4.0e-56 222.6 216 50.9
HPP92_013852 Vanilla planifolia HOM05D005896 ORTHO05D007250 4.0e-56 222.6 216 50.9
CAN.G738.1 Capsicum annuum HOM05D005896 ORTHO05D007250 5.2e-56 222.2 245 45.7
TAR623G1464 Trochodendron aralioides HOM05D005896 ORTHO05D007250 6.8e-56 221.9 217 51.6
Actinidia11539 Actinidia chinensis HOM05D005896 ORTHO05D007250 8.9e-56 221.5 218 50.0
CANSAT35G1655 Cannabis sativa HOM05D005896 ORTHO05D007250 8.9e-56 221.5 216 50.5
Hma1.2p1_2300F.1_g319233 Hydrangea macrophylla HOM05D005896 ORTHO05D007250 8.9e-56 221.5 235 49.4
Hma1.2p1_2300F.1_g319236 Hydrangea macrophylla HOM05D005896 ORTHO05D007250 8.9e-56 221.5 235 49.4
Solyc10g085400.3 Solanum lycopersicum HOM05D005896 ORTHO05D007250 8.9e-56 221.5 235 48.1
Sopen10g034850 Solanum pennellii HOM05D005896 ORTHO05D007250 8.9e-56 221.5 235 48.1
Thecc.05G004100 Theobroma cacao HOM05D005896 ORTHO05D007250 1.2e-55 221.1 217 52.1
ATR0681G081 Amborella trichopoda HOM05D005896 ORTHO05D007250 1.5e-55 220.7 216 51.9
GSVIVG01030240001 Vitis vinifera HOM05D005896 ORTHO05D007250 1.5e-55 220.7 216 50.0
Ciclev10011082m.g Citrus clementina HOM05D005896 ORTHO05D007250 2.0e-55 220.3 216 51.9
COL.COLO4_14429 Corchorus olitorius HOM05D005896 ORTHO05D007250 2.0e-55 220.3 216 51.9
Dinv35431 Davidia involucrata HOM05D005896 ORTHO05D007250 2.0e-55 220.3 217 49.8
Potri.006G106000 Populus trichocarpa HOM05D005896 ORTHO05D007250 2.0e-55 220.3 216 50.5
SEGI_19702 Sequoiadendron giganteum HOM05D005896 ORTHO05D007250 2.0e-55 220.3 216 50.5
CiPaw.09G216900 Carya illinoinensis HOM05D005896 ORTHO05D007250 2.6e-55 219.9 216 51.4
Haze_21109 Corylus avellana HOM05D005896 ORTHO05D007250 2.6e-55 219.9 214 50.5
Phvul.008G089700 Phaseolus vulgaris HOM05D005896 ORTHO05D007250 2.6e-55 219.9 216 49.5
DCAR_028898 Daucus carota HOM05D005896 ORTHO05D007250 4.4e-55 219.2 216 49.5
Glyma.09G279500 Glycine max HOM05D005896 ORTHO05D007250 4.4e-55 219.2 216 49.5
Cpa.g.c34215 Carica papaya HOM05D005896 ORTHO05D007250 5.7e-55 218.8 217 50.2
MBI15_g29358_MAGBIO Magnolia biondii HOM05D005896 ORTHO05D007250 5.7e-55 218.8 216 50.5
Manes.09G113900 Manihot esculenta HOM05D005896 ORTHO05D007250 5.7e-55 218.8 235 48.9
Mapoly0266s0003 Marchantia polymorpha HOM05D005896 ORTHO05D007250 7.5e-55 218.4 205 56.1
Glyma.18G209600 Glycine max HOM05D005896 ORTHO05D007250 9.8e-55 218.0 216 49.5
PSO339G6300 Papaver somniferum HOM05D005896 ORTHO05D007250 9.8e-55 218.0 216 50.9
TPR.G18656 Trifolium pratense HOM05D005896 ORTHO05D007250 1.3e-54 217.6 216 48.6
Atru.chr8.2358 Acer truncatum HOM05D005896 ORTHO05D007250 2.2e-54 216.9 216 50.0
Cfa017090 Carpinus fangiana HOM05D005896 ORTHO05D007250 2.2e-54 216.9 209 50.7
Lalb_Chr01g0023511 Lupinus albus HOM05D005896 ORTHO05D007250 2.2e-54 216.9 217 48.4
RcHm_v2.0_Chr3g0461101 Rosa chinensis HOM05D005896 ORTHO05D007250 2.2e-54 216.9 216 50.9
FvH4_6g10330 Fragaria vesca HOM05D005896 ORTHO05D007250 2.9e-54 216.5 216 50.5
FAN14G5183 Fragaria x ananassa HOM05D005896 ORTHO05D007250 2.9e-54 216.5 216 50.5
Pp3c18_18940 Physcomitrium patens HOM05D005896 ORTHO05D007250 2.9e-54 216.5 225 49.3
Psat3g120600 Pisum sativum HOM05D005896 ORTHO05D007250 2.9e-54 216.5 216 49.1
Prupe.6G287100 Prunus persica HOM05D005896 ORTHO05D007250 2.9e-54 216.5 217 49.8
QL07p033519 Quercus lobata HOM05D005896 ORTHO05D007250 2.9e-54 216.5 216 49.1
Rhsim05G0227300 Rhododendron simsii HOM05D005896 ORTHO05D007250 2.9e-54 216.5 217 49.8
Gohir.D04G136000 Gossypium hirsutum HOM05D005896 ORTHO05D007250 3.7e-54 216.1 216 50.0
Gorai.012G119800 Gossypium raimondii HOM05D005896 ORTHO05D007250 3.7e-54 216.1 216 50.0
Medtr7g071990 Medicago truncatula HOM05D005896 ORTHO05D007250 3.7e-54 216.1 216 48.1
arahy.Tifrunner.gnm1.ann1.2FTV5P Arachis hypogaea HOM05D005896 ORTHO05D007250 4.9e-54 215.7 216 48.6
MELO3C009120.2 Cucumis melo HOM05D005896 ORTHO05D007250 4.9e-54 215.7 216 49.1
Migut.J00081 Erythranthe guttata HOM05D005896 ORTHO05D007250 4.9e-54 215.7 216 49.1
FAN05G0609 Fragaria x ananassa HOM05D005896 ORTHO05D007250 4.9e-54 215.7 216 50.5
FAN05G5239 Fragaria x ananassa HOM05D005896 ORTHO05D007250 4.9e-54 215.7 216 50.5
HanXRQChr12g0363731 Helianthus annuus HOM05D005896 ORTHO05D007250 4.9e-54 215.7 235 46.8
Sed0010587 Sechium edule HOM05D005896 ORTHO05D007250 4.9e-54 215.7 216 49.5
arahy.Tifrunner.gnm1.ann1.Q3Q3XE Arachis hypogaea HOM05D005896 ORTHO05D007250 8.3e-54 214.9 216 48.1
CsaV3_3G033280 Cucumis sativus L. HOM05D005896 ORTHO05D007250 8.3e-54 214.9 216 48.6
FAN02G1083 Fragaria x ananassa HOM05D005896 ORTHO05D007250 8.3e-54 214.9 216 50.5
Lsat_1_v5_gn_8_105740 Lactuca sativa HOM05D005896 ORTHO05D007250 1.4e-53 214.2 235 46.0
Oeu033807.1 Olea europaea HOM05D005896 ORTHO05D007250 1.4e-53 214.2 223 48.0
SMO228G0083 Selaginella moellendorffii HOM05D005896 ORTHO05D007250 1.4e-53 214.2 216 51.9
VMungo1383G2905 Vigna mungo HOM05D005896 ORTHO05D007250 3.2e-53 213.0 216 48.6
SalBow5G4224 Salvia bowleyana HOM05D005896 ORTHO05D007250 4.1e-53 212.6 228 46.1
Gohir.A04G096200 Gossypium hirsutum HOM05D005896 ORTHO05D007250 1.2e-52 211.1 216 49.5
Ca_26097_v3 Cicer arietinum L. HOM05D005896 ORTHO05D007250 1.6e-52 210.7 216 47.2
MSTRG.5530 Avicennia marina HOM05D005896 ORTHO05D007250 2.7e-52 209.9 223 45.7
Actinidia26603 Actinidia chinensis HOM05D005896 ORTHO05D007250 3.5e-52 209.5 221 47.5
ECA236G3210 Erigeron canadensis HOM05D005896 ORTHO05D007250 3.5e-52 209.5 235 44.3
AL3G19830 Arabidopsis lyrata HOM05D005896 ORTHO05D007250 4.6e-52 209.1 216 48.6
Lj1g0024727 Lotus japonicus HOM05D005896 ORTHO05D007250 5.9e-52 208.8 216 47.2
MD04G1168900 Malus domestica HOM05D005896 ORTHO05D007250 5.9e-52 208.8 216 49.5
MD12G1182400 Malus domestica HOM05D005896 ORTHO05D007250 5.9e-52 208.8 216 48.6
BcaB04g18571 Brassica carinata HOM05D005896 ORTHO05D007250 2.3e-51 206.8 216 48.1
THA.LOC104823308 Tarenaya hassleriana HOM05D005896 ORTHO05D007250 3.0e-51 206.5 216 48.6
AUR62006318 Chenopodium quinoa HOM05D005896 ORTHO05D007250 5.0e-51 205.7 217 49.3
BolC3t16668H Brassica oleracea HOM05D005896 ORTHO05D007250 8.6e-51 204.9 217 48.8
C03p43970 Brassica napus HOM05D005896 ORTHO05D007250 1.9e-50 203.8 217 48.8
CAN.G1288.7 Capsicum annuum HOM05D005896 ORTHO05D007250 2.5e-50 203.4 216 49.1
ClCG10G022550 Citrullus lanatus HOM05D005896 ORTHO05D007250 2.5e-50 203.4 233 45.5
vmacro20337 Vaccinium macrocarpon HOM05D005896 ORTHO05D007250 2.5e-50 203.4 255 42.4
BcaC01g04196 Brassica carinata HOM05D005896 ORTHO05D007250 5.6e-50 202.2 217 48.4
A03p36350 Brassica napus HOM05D005896 ORTHO05D007250 5.6e-50 202.2 216 48.6
A03p36380 Brassica napus HOM05D005896 ORTHO05D007250 5.6e-50 202.2 216 48.6
AT3G08840 Arabidopsis thaliana HOM05D005896 ORTHO05D007250 7.3e-50 201.8 216 47.7
Sc02g0000680 Simmondsia chinensis HOM05D005896 ORTHO05D007250 2.8e-49 199.9 216 48.6
Carub.0003s0795 Capsella rubella HOM05D005896 ORTHO05D007250 3.6e-49 199.5 216 47.7
BraA03t12806Z Brassica rapa HOM05D005896 ORTHO05D007250 4.7e-49 199.1 216 47.7
BcaB04g20289 Brassica carinata HOM05D005896 ORTHO05D007250 5.2e-48 195.7 217 46.1
BcaC09g49362 Brassica carinata HOM05D005896 ORTHO05D007250 8.9e-48 194.9 217 46.5
BraA01t03093Z Brassica rapa HOM05D005896 ORTHO05D007250 1.2e-47 194.5 220 46.4
Aa31LG5G18810 Aethionema arabicum HOM05D005896 ORTHO05D007250 2.6e-47 193.4 216 46.8
Thhalv10020004m.g Eutrema salsugineum HOM05D005896 ORTHO05D007250 5.8e-47 192.2 216 47.2
C01p37440 Brassica napus HOM05D005896 ORTHO05D007250 1.3e-46 191.0 220 45.9
A01p29640 Brassica napus HOM05D005896 ORTHO05D007250 2.2e-46 190.3 218 46.3
PRCOL_00001217 Prasinoderma coloniale HOM05D005896 ORTHO05D007250 5.4e-45 185.7 250 44.0
Lj2A64G51 Lonicera japonica HOM05D005896 ORTHO05D007250 2.0e-44 183.7 216 46.3
Peaxi162Scf00009g01010 Petunia axillaris HOM05D005896 ORTHO05D007250 7.8e-44 181.8 179 48.0
FAN09G0048 Fragaria x ananassa HOM05D005896 ORTHO05D007250 1.7e-43 180.6 211 45.0
BolC1t03712H Brassica oleracea HOM05D005896 ORTHO05D007250 6.8e-40 168.7 202 44.1
AUR62026359 Chenopodium quinoa HOM05D005896 ORTHO05D007250 3.4e-39 166.4 215 43.7
Nn2g16051 Nelumbo nucifera HOM05D005896 ORTHO05D007250 8.4e-30 135.2 128 53.1
FAN14G5591 Fragaria x ananassa HOM05D005896 ORTHO05D007250 5.4e-29 132.5 218 39.0
HanXRQChr16g0509701 Helianthus annuus HOM05D005896 ORTHO05D007250 9.6e-10 68.6 79 45.6
MBI15_g29355_MAGBIO Magnolia biondii HOM05D005896 ORTHO05D007250 3.6e-09 66.6 102 36.3
CBR_g44413 Chara braunii HOM05D000019 ORTHO05D000048 1.5e-07 61.2 41 73.2
COL.COLO4_03233 Corchorus olitorius HOM05D005896 ORTHO05D007250 1.7e-06 57.8 149 32.9


User provided reference genes

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