Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CBR_g41368 Chara braunii HOM05D003758 ORTHO05D004344 0.0e+00 3436.4 2092 100.0
CBR_g17052 Chara braunii HOM05D003758 ORTHO05D004344 4.9e-84 318.2 617 34.2
CBR_g22385 Chara braunii HOM05D006522 ORTHO05D008183 8.9e-46 191.0 1108 23.7
Mapoly0039s0104 Marchantia polymorpha HOM05D003758 ORTHO05D004344 2.0e-37 163.3 672 26.9
HPP92_010605 Vanilla planifolia HOM05D003758 ORTHO05D004344 5.4e-35 155.2 619 25.4
Aqoxy6G02867 Aquilegia oxysepala HOM05D003758 ORTHO05D004344 1.1e-32 147.5 626 23.5
ATR0693G226 Amborella trichopoda HOM05D003758 ORTHO05D004344 2.1e-31 143.3 625 24.2
Duzib211G0665 Durio zibethinus HOM05D003758 ORTHO05D004344 3.8e-28 132.5 246 32.9
Nn6g32438 Nelumbo nucifera HOM05D003758 ORTHO05D004344 1.1e-27 131.0 302 28.8
GSVIVG01020570001 Vitis vinifera HOM05D003758 ORTHO05D004344 1.9e-27 130.2 246 29.3
Cfa004172 Carpinus fangiana HOM05D003758 ORTHO05D004344 1.6e-26 127.1 246 29.7
TAR633G1738 Trochodendron aralioides HOM05D003758 ORTHO05D004344 1.6e-26 127.1 341 27.6
AagrBONN_evm.TU.Sc2ySwM_344.4368 Anthoceros agrestis HOM05D003758 ORTHO05D004344 2.1e-26 126.7 334 28.4
QL03p022487 Quercus lobata HOM05D003758 ORTHO05D004344 2.1e-26 126.7 246 28.5
VMungo1127G2096 Vigna mungo HOM05D003758 ORTHO05D004344 2.1e-26 126.7 614 23.0
Eucgr.F03545 Eucalyptus grandis HOM05D003758 ORTHO05D004344 3.5e-26 125.9 301 28.9
AUR62024624 Chenopodium quinoa HOM05D003758 ORTHO05D004344 7.9e-26 124.8 246 29.3
HanXRQChr01g0018011 Helianthus annuus HOM05D003758 ORTHO05D004344 7.9e-26 124.8 246 31.3
RcHm_v2.0_Chr3g0487391 Rosa chinensis HOM05D003758 ORTHO05D004344 7.9e-26 124.8 305 28.2
Manes.05G012284 Manihot esculenta HOM05D003758 ORTHO05D004344 1.0e-25 124.4 248 28.6
Manes.05G014105 Manihot esculenta HOM05D003758 ORTHO05D004344 1.0e-25 124.4 248 28.6
Potri.002G194100 Populus trichocarpa HOM05D003758 ORTHO05D004344 1.0e-25 124.4 245 30.6
ECA248G1618 Erigeron canadensis HOM05D003758 ORTHO05D004344 2.3e-25 123.2 300 28.7
Nitab4.5_0004743g0050 Nicotiana tabacum HOM05D003758 ORTHO05D004344 3.9e-25 122.5 929 22.2
Haze_15238 Corylus avellana HOM05D003758 ORTHO05D004344 5.1e-25 122.1 246 29.3
Glyma.16G071100 Glycine max HOM05D003758 ORTHO05D004344 6.7e-25 121.7 582 23.0
Manes.05G007428 Manihot esculenta HOM05D003758 ORTHO05D004344 8.7e-25 121.3 246 28.5
Manes.05G014400 Manihot esculenta HOM05D003758 ORTHO05D004344 8.7e-25 121.3 246 28.5
Gorai.007G121400 Gossypium raimondii HOM05D003758 ORTHO05D004344 1.1e-24 120.9 313 26.2
CiPaw.13G125700 Carya illinoinensis HOM05D003758 ORTHO05D004344 1.5e-24 120.6 247 27.9
Lsat_1_v5_gn_1_61501 Lactuca sativa HOM05D003758 ORTHO05D004344 1.9e-24 120.2 246 31.3
Thecc.01G315600 Theobroma cacao HOM05D003758 ORTHO05D004344 1.9e-24 120.2 264 31.4
Gohir.D11G112900 Gossypium hirsutum HOM05D003758 ORTHO05D004344 2.5e-24 119.8 300 27.0
FvH4_1g27070 Fragaria vesca HOM05D003758 ORTHO05D004344 3.3e-24 119.4 305 26.9
Gohir.A11G108400 Gossypium hirsutum HOM05D003758 ORTHO05D004344 3.3e-24 119.4 300 27.0
Manes.08G002202 Manihot esculenta HOM05D003758 ORTHO05D004344 3.3e-24 119.4 246 28.0
Atru.chr5.975 Acer truncatum HOM05D003758 ORTHO05D004344 5.6e-24 118.6 243 30.9
Manes.17G075900 Manihot esculenta HOM05D003758 ORTHO05D004344 5.6e-24 118.6 246 28.0
PGSC0003DMG400027361 Solanum tuberosum HOM05D003758 ORTHO05D004344 5.6e-24 118.6 245 30.2
FAN28G1741 Fragaria x ananassa HOM05D003758 ORTHO05D004344 9.6e-24 117.9 305 26.6
CiPaw.05G057800 Carya illinoinensis HOM05D003758 ORTHO05D004344 1.6e-23 117.1 250 26.8
PGR044G1293 Punica granatum HOM05D003758 ORTHO05D004344 1.6e-23 117.1 251 31.1
PGR132G0005 Punica granatum HOM05D003758 ORTHO05D004344 1.6e-23 117.1 251 31.1
Ciclev10023744m.g Citrus clementina HOM05D003758 ORTHO05D004344 2.8e-23 116.3 300 28.3
FAN23G2430 Fragaria x ananassa HOM05D003758 ORTHO05D004344 3.7e-23 115.9 310 27.7
Cpa.g.sc18.69 Carica papaya HOM05D003758 ORTHO05D004344 4.8e-23 115.5 301 28.9
TWI36G1552 Tripterygium wilfordii HOM05D003758 ORTHO05D004344 4.8e-23 115.5 605 22.5
MELO3C016319.2 Cucumis melo HOM05D003758 ORTHO05D004344 6.2e-23 115.2 273 29.3
Migut.N00382 Erythranthe guttata HOM05D003758 ORTHO05D004344 8.1e-23 114.8 300 27.0
FAN26G0338 Fragaria x ananassa HOM05D003758 ORTHO05D004344 8.1e-23 114.8 310 27.1
Phvul.011G184700 Phaseolus vulgaris HOM05D003758 ORTHO05D004344 8.1e-23 114.8 251 27.9
CANSAT35G0058 Cannabis sativa HOM05D003758 ORTHO05D004344 1.1e-22 114.4 245 29.4
Nitab4.5_0000321g0240 Nicotiana tabacum HOM05D003758 ORTHO05D004344 1.1e-22 114.4 919 22.6
CSS0004415 Camellia sinensis var. sinensis HOM05D003758 ORTHO05D004344 1.4e-22 114.0 276 27.9
CSS0000786 Camellia sinensis var. sinensis HOM05D003758 ORTHO05D004344 1.8e-22 113.6 276 27.9
PSO384G2631 Papaver somniferum HOM05D003758 ORTHO05D004344 1.8e-22 113.6 319 28.2
PSO339G3435 Papaver somniferum HOM05D003758 ORTHO05D004344 2.4e-22 113.2 323 28.5
Dinv37509 Davidia involucrata HOM05D003758 ORTHO05D004344 4.0e-22 112.5 246 28.9
FAN19G1056 Fragaria x ananassa HOM05D003758 ORTHO05D004344 4.0e-22 112.5 316 26.9
MBI19_g03239_MAGBIO Magnolia biondii HOM05D003758 ORTHO05D004344 4.0e-22 112.5 338 25.7
Sopen11g003660 Solanum pennellii HOM05D003758 ORTHO05D004344 4.0e-22 112.5 245 30.6
Pp3c2_6540 Physcomitrium patens HOM05D003758 ORTHO05D004344 5.3e-22 112.1 321 29.6
Lj2A672T52 Lonicera japonica HOM05D003758 ORTHO05D004344 6.9e-22 111.7 263 27.8
Nitab4.5_0004412g0060 Nicotiana tabacum HOM05D003758 ORTHO05D004344 6.9e-22 111.7 919 21.7
Solyc11g007800.3 Solanum lycopersicum HOM05D003758 ORTHO05D004344 6.9e-22 111.7 245 30.2
MD17G1277400 Malus domestica HOM05D003758 ORTHO05D004344 9.0e-22 111.3 338 25.7
CsaV3_4G006310 Cucumis sativus L. HOM05D003758 ORTHO05D004344 1.5e-21 110.5 246 28.0
Lj4g0003540 Lotus japonicus HOM05D003758 ORTHO05D004344 1.5e-21 110.5 314 26.4
vmacro07358 Vaccinium macrocarpon HOM05D003758 ORTHO05D004344 1.5e-21 110.5 247 29.1
vmacro23005 Vaccinium macrocarpon HOM05D003758 ORTHO05D004344 1.5e-21 110.5 247 29.1
Sed0003653 Sechium edule HOM05D003758 ORTHO05D004344 2.0e-21 110.2 246 28.9
Psat4g209760 Pisum sativum HOM05D003758 ORTHO05D004344 2.6e-21 109.8 320 26.6
Sed0008176 Sechium edule HOM05D003758 ORTHO05D004344 3.4e-21 109.4 278 27.3
vmacro02393 Vaccinium macrocarpon HOM05D003758 ORTHO05D004344 3.4e-21 109.4 246 29.3
Prupe.3G010600 Prunus persica HOM05D003758 ORTHO05D004344 4.5e-21 109.0 300 27.0
Aa31LG1G28620 Aethionema arabicum HOM05D003758 ORTHO05D004344 5.8e-21 108.6 282 30.9
CAN.G135.34 Capsicum annuum HOM05D003758 ORTHO05D004344 5.8e-21 108.6 581 22.2
arahy.Tifrunner.gnm1.ann1.CZ320C Arachis hypogaea HOM05D003758 ORTHO05D004344 1.0e-20 107.8 626 21.4
AT2G47300 Arabidopsis thaliana HOM05D003758 ORTHO05D004344 1.3e-20 107.5 266 28.2
CARHR142690 Cardamine hirsuta HOM05D003758 ORTHO05D004344 1.3e-20 107.5 267 29.2
Oeu049922.1 Olea europaea HOM05D003758 ORTHO05D004344 1.3e-20 107.5 363 25.9
Psat7g259120 Pisum sativum HOM05D003758 ORTHO05D004344 1.3e-20 107.5 247 28.7
MD17G1275700 Malus domestica HOM05D003758 ORTHO05D004344 1.7e-20 107.1 245 27.3
COL.COLO4_23214 Corchorus olitorius HOM05D003758 ORTHO05D004344 2.2e-20 106.7 246 30.5
SalBow3G2832 Salvia bowleyana HOM05D003758 ORTHO05D004344 2.2e-20 106.7 254 28.3
Thhalv10024413m.g Eutrema salsugineum HOM05D003758 ORTHO05D004344 3.8e-20 105.9 267 28.8
Manes.05G010463 Manihot esculenta HOM05D003758 ORTHO05D004344 3.8e-20 105.9 232 27.2
Medtr4g008840 Medicago truncatula HOM05D003758 ORTHO05D004344 3.8e-20 105.9 247 30.0
Lj3g0021338 Lotus japonicus HOM05D003758 ORTHO05D004344 4.9e-20 105.5 253 27.3
Zm00001eb331260 Zea mays HOM05D003758 ORTHO05D004344 4.9e-20 105.5 355 24.2
BcaB02g08631 Brassica carinata HOM05D003758 ORTHO05D004344 6.5e-20 105.1 267 27.7
Hund21053 Selenicereus undatus HOM05D003758 ORTHO05D004344 1.1e-19 104.4 243 27.6
Carub.0004s3002 Capsella rubella HOM05D003758 ORTHO05D004344 1.4e-19 104.0 245 28.2
Glyma.15G216400 Glycine max HOM05D003758 ORTHO05D004344 1.4e-19 104.0 251 26.7
Ca_26914_v3 Cicer arietinum L. HOM05D003758 ORTHO05D004344 2.5e-19 103.2 363 25.3
Ca_29676_v3 Cicer arietinum L. HOM05D003758 ORTHO05D004344 2.5e-19 103.2 363 25.3
Lalb_Chr02g0146891 Lupinus albus HOM05D003758 ORTHO05D004344 3.2e-19 102.8 364 26.1
SGA_v2.0_scaffold114G31985 Striga asiatica HOM05D003758 ORTHO05D004344 3.2e-19 102.8 257 27.2
BcaC02g09356 Brassica carinata HOM05D003758 ORTHO05D004344 5.5e-19 102.1 267 28.1
CiPaw.05G057600 Carya illinoinensis HOM05D003758 ORTHO05D004344 7.1e-19 101.7 244 27.0
Cc02_g30290 Coffea canephora HOM05D003758 ORTHO05D004344 7.1e-19 101.7 304 27.0
CDE11G0119 Ceratophyllum demersum HOM05D003758 ORTHO05D004344 2.7e-18 99.8 305 26.6
DCAR_018285 Daucus carota HOM05D003758 ORTHO05D004344 6.0e-18 98.6 359 25.9
Eucgr.D02543 Eucalyptus grandis HOM05D003758 ORTHO05D004344 7.9e-18 98.2 248 28.2
Sp7g11950 Schrenkiella parvula HOM05D003758 ORTHO05D004344 7.9e-18 98.2 267 26.2
AUR62011780 Chenopodium quinoa HOM05D003758 ORTHO05D004344 1.8e-17 97.1 232 26.3
Ah.02g112390 Amaranthus hybridus HOM05D003758 ORTHO05D004344 5.1e-17 95.5 245 26.1
BraA04t16490Z Brassica rapa HOM05D003758 ORTHO05D004344 1.5e-16 94.0 269 27.1
arahy.Tifrunner.gnm1.ann1.8X0TS3 Arachis hypogaea HOM05D003758 ORTHO05D004344 5.7e-16 92.0 630 21.6
A04p08020 Brassica napus HOM05D003758 ORTHO05D004344 2.8e-15 89.7 267 26.6
C04p41700 Brassica napus HOM05D003758 ORTHO05D004344 2.8e-15 89.7 275 27.3
BolC4t25747H Brassica oleracea HOM05D003758 ORTHO05D004344 2.8e-15 89.7 275 27.3
Rhsim13G0004000 Rhododendron simsii HOM05D003758 ORTHO05D004344 2.8e-15 89.7 224 28.1
Cc00_g26030 Coffea canephora HOM05D003758 ORTHO05D004344 3.1e-14 86.3 217 27.2
Peaxi162Scf00192g01619 Petunia axillaris HOM05D003758 ORTHO05D004344 3.1e-14 86.3 247 26.3
THA.LOC104807090 Tarenaya hassleriana HOM05D003758 ORTHO05D004344 3.1e-14 86.3 206 29.6
unitig_8.g3963 Utricularia gibba HOM05D003758 ORTHO05D004344 1.5e-13 84.0 243 26.7
Atru.chr9.1365 Acer truncatum HOM05D003758 ORTHO05D004344 9.3e-11 74.7 246 25.2
CiPaw.05G057300 Carya illinoinensis HOM05D003758 ORTHO05D004344 4.6e-10 72.4 102 33.3
Sabra02G0162300 Salix brachista HOM05D003758 ORTHO05D004344 3.3e-08 66.2 65 47.7
Os11g0677500 Oryza sativa ssp. japonica HOM05D003758 ORTHO05D004344 7.4e-08 65.1 172 26.2
Dinv10116 Davidia involucrata HOM05D003758 ORTHO05D004344 1.3e-07 64.3 70 40.0
Dinv10117 Davidia involucrata HOM05D003758 ORTHO05D004344 2.2e-07 63.5 110 38.2
TAR629G0826 Trochodendron aralioides HOM05D003758 ORTHO05D004344 2.2e-07 63.5 115 33.9
TAR629G2570 Trochodendron aralioides HOM05D003758 ORTHO05D004344 2.8e-07 63.2 137 25.5
GSVIVG01038399001 Vitis vinifera HOM05D003758 ORTHO05D004344 3.7e-07 62.8 72 34.7
EL10As5g23552 Beta vulgaris HOM05D003758 ORTHO05D004344 6.3e-07 62.0 69 40.6
MSTRG.19341 Avicennia marina HOM05D003758 ORTHO05D004344 2.4e-06 60.1 183 26.8
Actinidia03664 Actinidia chinensis HOM05D003758 ORTHO05D004344 4.1e-06 59.3 70 35.7


User provided reference genes

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