Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CBR_g41144 Chara braunii HOM05D004632 ORTHO05D005556 6.0e-106 387.5 193 100.0
Mapoly0009s0169 Marchantia polymorpha HOM05D004632 ORTHO05D005556 5.7e-64 248.1 195 62.1
Aqoxy7G03810 Aquilegia oxysepala HOM05D004632 ORTHO05D005556 3.6e-58 228.8 193 54.9
Pp3c12_23330 Physcomitrium patens HOM05D004632 ORTHO05D005556 2.3e-57 226.1 192 57.3
ATR0739G094 Amborella trichopoda HOM05D004632 ORTHO05D005556 6.7e-57 224.6 193 55.4
Dinv34967 Davidia involucrata HOM05D004632 ORTHO05D005556 2.6e-56 222.6 193 53.4
Actinidia22297 Actinidia chinensis HOM05D004632 ORTHO05D005556 3.3e-56 222.2 193 53.4
Prupe.1G392800 Prunus persica HOM05D004632 ORTHO05D005556 8.2e-55 217.6 194 53.6
CSS0008139 Camellia sinensis var. sinensis HOM05D004632 ORTHO05D005556 1.4e-54 216.9 193 52.8
MD00G1143300 Malus domestica HOM05D004632 ORTHO05D005556 1.4e-54 216.9 192 53.6
CAN.G199.61 Capsicum annuum HOM05D004632 ORTHO05D005556 4.1e-54 215.3 193 52.8
GSVIVG01035887001 Vitis vinifera HOM05D004632 ORTHO05D005556 4.1e-54 215.3 196 52.0
Cc09_g08590 Coffea canephora HOM05D004632 ORTHO05D005556 1.6e-53 213.4 194 52.1
ClCG05G016370 Citrullus lanatus HOM05D004632 ORTHO05D005556 5.9e-53 211.5 193 50.8
Psat5g032640 Pisum sativum HOM05D004632 ORTHO05D005556 7.7e-53 211.1 193 50.8
RcHm_v2.0_Chr6g0299541 Rosa chinensis HOM05D004632 ORTHO05D005556 1.3e-52 210.3 193 52.8
CiPaw.07G229300 Carya illinoinensis HOM05D004632 ORTHO05D005556 1.7e-52 209.9 199 51.3
Nn8g39852 Nelumbo nucifera HOM05D004632 ORTHO05D005556 2.2e-52 209.5 194 50.5
Medtr3g106080 Medicago truncatula HOM05D004632 ORTHO05D005556 5.0e-52 208.4 193 50.3
MD15G1039100 Malus domestica HOM05D004632 ORTHO05D005556 6.5e-52 208.0 192 52.1
CsaV3_4G036640 Cucumis sativus L. HOM05D004632 ORTHO05D005556 8.5e-52 207.6 193 50.3
Ca_15774_v3 Cicer arietinum L. HOM05D004632 ORTHO05D005556 1.1e-51 207.2 193 50.3
DCAR_015265 Daucus carota HOM05D004632 ORTHO05D005556 1.1e-51 207.2 193 50.8
PGR042G1415 Punica granatum HOM05D004632 ORTHO05D005556 1.1e-51 207.2 194 50.5
Sp2g22380 Schrenkiella parvula HOM05D004632 ORTHO05D005556 1.1e-51 207.2 193 50.3
Rhsim02G0214000 Rhododendron simsii HOM05D004632 ORTHO05D005556 1.5e-51 206.8 193 50.3
PSO782G2171 Papaver somniferum HOM05D004632 ORTHO05D005556 1.9e-51 206.5 193 49.7
Peaxi162Scf00430g00519 Petunia axillaris HOM05D004632 ORTHO05D005556 1.9e-51 206.5 193 50.3
Solyc06g065700.3 Solanum lycopersicum HOM05D004632 ORTHO05D005556 1.9e-51 206.5 198 50.0
Sopen06g024220 Solanum pennellii HOM05D004632 ORTHO05D005556 1.9e-51 206.5 198 50.0
TWI32G0830 Tripterygium wilfordii HOM05D004632 ORTHO05D005556 2.5e-51 206.1 198 52.5
MELO3C016968.2 Cucumis melo HOM05D004632 ORTHO05D005556 3.2e-51 205.7 193 50.3
Nitab4.5_0007182g0050 Nicotiana tabacum HOM05D004632 ORTHO05D005556 3.2e-51 205.7 202 50.5
HanXRQChr03g0084861 Helianthus annuus HOM05D004632 ORTHO05D005556 4.2e-51 205.3 191 50.8
Thhalv10003767m.g Eutrema salsugineum HOM05D004632 ORTHO05D005556 5.5e-51 204.9 193 50.3
TPR.G1835 Trifolium pratense HOM05D004632 ORTHO05D005556 5.5e-51 204.9 193 49.2
A09p06280 Brassica napus HOM05D004632 ORTHO05D005556 9.4e-51 204.1 193 49.2
BraA09t36273Z Brassica rapa HOM05D004632 ORTHO05D005556 9.4e-51 204.1 193 49.2
Phvul.009G087600 Phaseolus vulgaris HOM05D004632 ORTHO05D005556 9.4e-51 204.1 193 48.7
Sed0004025 Sechium edule HOM05D004632 ORTHO05D005556 1.2e-50 203.8 193 50.3
arahy.Tifrunner.gnm1.ann1.21LKMJ Arachis hypogaea HOM05D004632 ORTHO05D005556 1.6e-50 203.4 193 49.2
arahy.Tifrunner.gnm1.ann1.8PBG0P Arachis hypogaea HOM05D004632 ORTHO05D005556 1.6e-50 203.4 193 49.2
VMungo1309G0882 Vigna mungo HOM05D004632 ORTHO05D005556 1.6e-50 203.4 193 48.2
EL10Ac1g00704 Beta vulgaris HOM05D004632 ORTHO05D005556 2.1e-50 203.0 200 50.0
Ah.05g177560 Amaranthus hybridus HOM05D004632 ORTHO05D005556 3.6e-50 202.2 198 49.0
BcaB04g19812 Brassica carinata HOM05D004632 ORTHO05D005556 4.7e-50 201.8 194 48.5
MBI15_g05236_MAGBIO Magnolia biondii HOM05D004632 ORTHO05D005556 4.7e-50 201.8 193 49.7
A02p39940 Brassica napus HOM05D004632 ORTHO05D005556 6.1e-50 201.4 193 48.7
Potri.018G020200 Populus trichocarpa HOM05D004632 ORTHO05D005556 8.0e-50 201.1 195 49.7
C09p06950 Brassica napus HOM05D004632 ORTHO05D005556 1.0e-49 200.7 193 48.2
BolC9t53613H Brassica oleracea HOM05D004632 ORTHO05D005556 1.0e-49 200.7 193 48.2
PSO063G4867 Papaver somniferum HOM05D004632 ORTHO05D005556 1.0e-49 200.7 193 48.2
BcaC04g23574 Brassica carinata HOM05D004632 ORTHO05D005556 1.4e-49 200.3 193 48.2
C02p59830 Brassica napus HOM05D004632 ORTHO05D005556 1.4e-49 200.3 193 48.2
BolC2t12041H Brassica oleracea HOM05D004632 ORTHO05D005556 1.4e-49 200.3 193 48.2
Cpa.g.sc127.22 Carica papaya HOM05D004632 ORTHO05D005556 1.4e-49 200.3 193 50.3
FvH4_2g41020 Fragaria vesca HOM05D004632 ORTHO05D005556 1.8e-49 199.9 193 49.2
FAN20G0152 Fragaria x ananassa HOM05D004632 ORTHO05D005556 1.8e-49 199.9 193 49.2
FAN20G1191 Fragaria x ananassa HOM05D004632 ORTHO05D005556 1.8e-49 199.9 193 49.2
SGA_v2.0_scaffold40G15680 Striga asiatica HOM05D004632 ORTHO05D005556 1.8e-49 199.9 193 51.8
BcaB07g29936 Brassica carinata HOM05D004632 ORTHO05D005556 2.3e-49 199.5 193 48.2
Ciclev10007613m.g Citrus clementina HOM05D004632 ORTHO05D005556 2.3e-49 199.5 193 49.2
ECA240G3507 Erigeron canadensis HOM05D004632 ORTHO05D005556 2.3e-49 199.5 190 49.5
Nitab4.5_0003976g0020 Nicotiana tabacum HOM05D004632 ORTHO05D005556 3.0e-49 199.1 215 46.5
BraA02t08956Z Brassica rapa HOM05D004632 ORTHO05D005556 4.0e-49 198.7 193 48.2
Potri.006G263400 Populus trichocarpa HOM05D004632 ORTHO05D005556 4.0e-49 198.7 195 48.2
SalBow1G2567 Salvia bowleyana HOM05D004632 ORTHO05D005556 4.0e-49 198.7 193 50.3
Carub.0006s2297 Capsella rubella HOM05D004632 ORTHO05D005556 5.2e-49 198.4 193 48.2
THA.LOC104814991 Tarenaya hassleriana HOM05D004632 ORTHO05D005556 5.2e-49 198.4 201 46.8
MSTRG.9370 Avicennia marina HOM05D004632 ORTHO05D005556 8.8e-49 197.6 191 50.8
CARHR188340 Cardamine hirsuta HOM05D004632 ORTHO05D005556 8.8e-49 197.6 191 47.6
FAN27G1200 Fragaria x ananassa HOM05D004632 ORTHO05D005556 8.8e-49 197.6 193 48.7
Glyma.06G062300 Glycine max HOM05D004632 ORTHO05D005556 8.8e-49 197.6 193 48.2
Glyma.04G061600 Glycine max HOM05D004632 ORTHO05D005556 1.5e-48 196.8 193 47.7
Sabra06G0205900 Salix brachista HOM05D004632 ORTHO05D005556 1.5e-48 196.8 193 49.2
AT5G25150 Arabidopsis thaliana HOM05D004632 ORTHO05D005556 2.0e-48 196.4 193 47.2
Lalb_Chr23g0268241 Lupinus albus HOM05D004632 ORTHO05D005556 2.0e-48 196.4 193 48.2
CDE05G3472 Ceratophyllum demersum HOM05D004632 ORTHO05D005556 2.6e-48 196.1 191 47.6
Aa31LG11G4400 Aethionema arabicum HOM05D004632 ORTHO05D005556 3.4e-48 195.7 196 45.9
Lsat_1_v5_gn_7_4261 Lactuca sativa HOM05D004632 ORTHO05D005556 3.4e-48 195.7 197 49.7
Lj1g0022186 Lotus japonicus HOM05D004632 ORTHO05D005556 3.4e-48 195.7 193 47.7
Manes.16G128700 Manihot esculenta HOM05D004632 ORTHO05D005556 4.4e-48 195.3 193 49.7
Lsat_1_v5_gn_6_77900 Lactuca sativa HOM05D004632 ORTHO05D005556 5.7e-48 194.9 198 50.0
Gorai.001G037500 Gossypium raimondii HOM05D004632 ORTHO05D005556 1.7e-47 193.4 184 50.5
AUR62023356 Chenopodium quinoa HOM05D004632 ORTHO05D005556 2.2e-47 193.0 194 49.5
Migut.N00603 Erythranthe guttata HOM05D004632 ORTHO05D005556 2.2e-47 193.0 191 48.7
Gohir.A07G031900 Gossypium hirsutum HOM05D004632 ORTHO05D005556 2.2e-47 193.0 186 50.0
HPP92_014401 Vanilla planifolia HOM05D004632 ORTHO05D005556 2.2e-47 193.0 194 47.4
MSTRG.4644 Avicennia marina HOM05D004632 ORTHO05D005556 3.7e-47 192.2 192 49.0
Gohir.D07G035600 Gossypium hirsutum HOM05D004632 ORTHO05D005556 4.8e-47 191.8 184 50.0
Gohir.A05G058900 Gossypium hirsutum HOM05D004632 ORTHO05D005556 1.1e-46 190.7 184 48.9
SMO118G0104 Selaginella moellendorffii HOM05D004632 ORTHO05D005556 1.1e-46 190.7 133 66.9
Duzib168G2284 Durio zibethinus HOM05D004632 ORTHO05D005556 1.8e-46 189.9 184 49.5
Atru.chr7.2537 Acer truncatum HOM05D004632 ORTHO05D005556 3.1e-46 189.1 200 47.5
Eucgr.C02661 Eucalyptus grandis HOM05D004632 ORTHO05D005556 1.6e-45 186.8 205 46.8
AL6G36810 Arabidopsis lyrata HOM05D004632 ORTHO05D005556 2.0e-45 186.4 193 44.6
AUR62013801 Chenopodium quinoa HOM05D004632 ORTHO05D005556 1.5e-43 180.3 135 58.5
Haze_21427 Corylus avellana HOM05D004632 ORTHO05D005556 2.5e-43 179.5 197 47.7
Oeu061252.3 Olea europaea HOM05D004632 ORTHO05D005556 3.2e-43 179.1 164 51.2
SEGI_13945 Sequoiadendron giganteum HOM05D004632 ORTHO05D005556 5.5e-43 178.3 166 53.0
Os06g0649500 Oryza sativa ssp. japonica HOM05D004632 ORTHO05D005556 1.6e-42 176.8 188 45.2
MCO11G293 Micromonas commoda HOM05D004632 ORTHO05D005556 1.7e-39 166.8 190 43.2
MCO11G306 Micromonas commoda HOM05D004632 ORTHO05D005556 1.7e-39 166.8 190 43.2
PRCOL_00000651 Prasinoderma coloniale HOM05D004632 ORTHO05D005556 1.7e-39 166.8 186 43.5
VMungo0647G2075 Vigna mungo HOM05D004632 ORTHO05D005556 2.2e-39 166.4 193 44.6
Phvul.001G042300 Phaseolus vulgaris HOM05D004632 ORTHO05D005556 4.9e-39 165.2 196 43.4
Lj7A732T26 Lonicera japonica HOM05D004632 ORTHO05D005556 3.1e-38 162.5 168 46.4
Hund27424 Selenicereus undatus HOM05D004632 ORTHO05D005556 3.1e-38 162.5 227 41.0
CSS0046974 Camellia sinensis var. sinensis HOM05D004632 ORTHO05D005556 5.4e-38 161.8 146 52.7
Glyma.17G222200 Glycine max HOM05D004632 ORTHO05D005556 2.0e-37 159.8 196 41.3
BcaC03g17924 Brassica carinata HOM05D004632 ORTHO05D005556 2.0e-29 133.3 193 37.8
CSS0042581 Camellia sinensis var. sinensis HOM05D004632 ORTHO05D005556 1.2e-24 117.5 108 50.0
Thecc.09G016800 Theobroma cacao HOM05D004632 ORTHO05D005556 1.2e-24 117.5 92 56.5
vmacro11252 Vaccinium macrocarpon HOM05D004632 ORTHO05D005556 1.5e-24 117.1 92 55.4
Gohir.D05G060932 Gossypium hirsutum HOM05D004632 ORTHO05D005556 2.2e-23 113.2 148 38.5
Zm00001eb388650 Zea mays HOM05D004632 ORTHO05D005556 2.9e-23 112.8 92 52.2
Sed0017212 Sechium edule HOM05D004632 ORTHO05D005556 6.0e-21 105.1 92 47.8
TAR626G1191 Trochodendron aralioides HOM05D004632 ORTHO05D005556 2.8e-18 96.3 90 50.0
CDE05G1210 Ceratophyllum demersum HOM05D004632 ORTHO05D005556 5.8e-16 88.6 67 56.7
TAR625G0176 Trochodendron aralioides HOM05D004632 ORTHO05D005556 2.9e-15 86.3 92 45.7
Actinidia10512 Actinidia chinensis HOM05D004632 ORTHO05D005556 3.5e-13 79.3 86 45.3
Cre12.g526950 Chlamydomonas reinhardtii HOM05D004632 ORTHO05D005556 5.1e-12 75.5 218 28.0
PSO541G0014 Papaver somniferum HOM05D004632 ORTHO05D005556 1.1e-11 74.3 67 46.3
Cfa022837 Carpinus fangiana HOM05D004632 ORTHO05D005556 1.9e-11 73.6 195 26.7
Glyma.14G103500 Glycine max HOM05D004632 ORTHO05D005556 1.9e-11 73.6 115 36.5
Manes.03G009801 Manihot esculenta HOM05D004632 ORTHO05D005556 7.6e-08 61.6 80 42.5


User provided reference genes

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