Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CBR_g40186 Chara braunii HOM05D000336 ORTHO05D000593 3.5e-311 1070.8 565 100.0
CBR_g39234 Chara braunii HOM05D000336 ORTHO05D000593 1.8e-57 228.0 258 62.8
DCAR_021283 Daucus carota HOM05D000336 ORTHO05D000593 2.0e-08 65.1 108 34.3
SEGI_22216 Sequoiadendron giganteum HOM05D000336 ORTHO05D000593 2.6e-08 64.7 87 41.4
Nn5g29772 Nelumbo nucifera HOM05D000336 ORTHO05D000593 4.5e-08 63.9 78 43.6
DCAR_021896 Daucus carota HOM05D000336 ORTHO05D000593 7.6e-08 63.2 123 34.1
Oeu041904.1 Olea europaea HOM05D000336 ORTHO05D000593 7.6e-08 63.2 85 38.8
Pp3c4_19130 Physcomitrium patens HOM05D000336 ORTHO05D000593 9.9e-08 62.8 91 36.3
Pp3c4_19180 Physcomitrium patens HOM05D000336 ORTHO05D000593 9.9e-08 62.8 91 36.3
SGA_v2.0_scaffold9G04803 Striga asiatica HOM05D000336 ORTHO05D000593 9.9e-08 62.8 104 32.7
TAR376G0749 Trochodendron aralioides HOM05D000336 ORTHO05D000593 9.9e-08 62.8 78 42.3
MSTRG.5295 Avicennia marina HOM05D000336 ORTHO05D000593 1.3e-07 62.4 95 36.8
Cc05_g08080 Coffea canephora HOM05D000336 ORTHO05D000593 1.3e-07 62.4 85 40.0
ATR0800G076 Amborella trichopoda HOM05D000336 ORTHO05D000593 1.7e-07 62.0 78 41.0
unitig_0.g891 Utricularia gibba HOM05D000336 ORTHO05D000593 1.7e-07 62.0 87 39.1
MSTRG.16634 Avicennia marina HOM05D000336 ORTHO05D000593 2.2e-07 61.6 93 37.6
Zm00001eb413410 Zea mays HOM05D000336 ORTHO05D000593 2.2e-07 61.6 72 45.8
MSTRG.20253 Avicennia marina HOM05D000336 ORTHO05D000593 2.9e-07 61.2 82 41.5
Migut.M00249 Erythranthe guttata HOM05D000336 ORTHO05D000593 2.9e-07 61.2 75 41.3
SalBow6G0279 Salvia bowleyana HOM05D000336 ORTHO05D000593 2.9e-07 61.2 95 36.8
C02p30610 Brassica napus HOM05D000336 ORTHO05D000593 3.8e-07 60.8 90 40.0
C08p43660 Brassica napus HOM05D000336 ORTHO05D000593 3.8e-07 60.8 88 39.8
BolC2t09111H Brassica oleracea HOM05D000336 ORTHO05D000593 3.8e-07 60.8 90 40.0
CAN.G504.47 Capsicum annuum HOM05D000336 ORTHO05D000593 3.8e-07 60.8 78 42.3
Thhalv10018464m.g Eutrema salsugineum HOM05D000336 ORTHO05D000593 3.8e-07 60.8 90 40.0
Nitab4.5_0002335g0020 Nicotiana tabacum HOM05D000336 ORTHO05D000593 3.8e-07 60.8 78 42.3
Nitab4.5_0005163g0070 Nicotiana tabacum HOM05D000336 ORTHO05D000593 3.8e-07 60.8 78 42.3
Oeu010513.1 Olea europaea HOM05D000336 ORTHO05D000593 3.8e-07 60.8 92 38.0
THA.LOC104812202 Tarenaya hassleriana HOM05D000336 ORTHO05D000593 3.8e-07 60.8 90 38.9
CDE04G0618 Ceratophyllum demersum HOM05D000336 ORTHO05D000593 4.9e-07 60.5 78 42.3
Nitab4.5_0000291g0050 Nicotiana tabacum HOM05D000336 ORTHO05D000593 4.9e-07 60.5 78 42.3
Oeu042392.1 Olea europaea HOM05D000336 ORTHO05D000593 4.9e-07 60.5 92 37.0
Oeu059889.1 Olea europaea HOM05D000336 ORTHO05D000593 4.9e-07 60.5 92 37.0
SHI04492 Sapria himalayana HOM05D000336 ORTHO05D000593 4.9e-07 60.5 89 36.0
SEGI_22030 Sequoiadendron giganteum HOM05D000336 ORTHO05D000593 4.9e-07 60.5 87 36.8
CARHR066120 Cardamine hirsuta HOM05D000336 ORTHO05D000593 6.4e-07 60.1 90 40.0
Cc02_g20580 Coffea canephora HOM05D000336 ORTHO05D000593 6.4e-07 60.1 78 42.3
Hma1.2p1_0080F.1_g042120 Hydrangea macrophylla HOM05D000336 ORTHO05D000593 6.4e-07 60.1 78 41.0
Rhsim04G0073400 Rhododendron simsii HOM05D000336 ORTHO05D000593 6.4e-07 60.1 90 33.3
SalBow6G4071 Salvia bowleyana HOM05D000336 ORTHO05D000593 6.4e-07 60.1 97 35.1
BcaC07g41360 Brassica carinata HOM05D000336 ORTHO05D000593 8.4e-07 59.7 88 38.6
BcaNung05479 Brassica carinata HOM05D000336 ORTHO05D000593 8.4e-07 59.7 88 38.6
A02p18480 Brassica napus HOM05D000336 ORTHO05D000593 8.4e-07 59.7 90 37.8
BraA02t06887Z Brassica rapa HOM05D000336 ORTHO05D000593 8.4e-07 59.7 90 37.8
ECA240G2711 Erigeron canadensis HOM05D000336 ORTHO05D000593 8.4e-07 59.7 93 33.3
Sp5g28110 Schrenkiella parvula HOM05D000336 ORTHO05D000593 8.4e-07 59.7 90 38.9
Solyc01g106280.3 Solanum lycopersicum HOM05D000336 ORTHO05D000593 8.4e-07 59.7 78 41.0
PGSC0003DMG400003108 Solanum tuberosum HOM05D000336 ORTHO05D000593 8.4e-07 59.7 78 41.0
Atru.chr2.2246 Acer truncatum HOM05D000336 ORTHO05D000593 1.1e-06 59.3 90 36.7
Peaxi162Scf00703g00025 Petunia axillaris HOM05D000336 ORTHO05D000593 1.1e-06 59.3 87 39.1
Sopen01g048660 Solanum pennellii HOM05D000336 ORTHO05D000593 1.1e-06 59.3 82 40.2
unitig_61.g26046 Utricularia gibba HOM05D000336 ORTHO05D000593 1.1e-06 59.3 87 37.9
Ah.06g185150 Amaranthus hybridus HOM05D000336 ORTHO05D000593 1.4e-06 58.9 85 40.0
BcaC08g45672 Brassica carinata HOM05D000336 ORTHO05D000593 1.4e-06 58.9 69 43.5
CSS0017677 Camellia sinensis var. sinensis HOM05D000336 ORTHO05D000593 1.4e-06 58.9 78 42.3
CSS0048144 Camellia sinensis var. sinensis HOM05D000336 ORTHO05D000593 1.4e-06 58.9 78 42.3
ClCG09G011350 Citrullus lanatus HOM05D000336 ORTHO05D000593 1.4e-06 58.9 75 40.0
Ciclev10028177m.g Citrus clementina HOM05D000336 ORTHO05D000593 1.4e-06 58.9 78 41.0
ECA240G0856 Erigeron canadensis HOM05D000336 ORTHO05D000593 1.4e-06 58.9 78 41.0
Migut.B00521 Erythranthe guttata HOM05D000336 ORTHO05D000593 1.4e-06 58.9 78 39.7
Eucgr.A01894 Eucalyptus grandis HOM05D000336 ORTHO05D000593 1.4e-06 58.9 89 34.8
Lj1P689T17 Lonicera japonica HOM05D000336 ORTHO05D000593 1.4e-06 58.9 90 35.6
Lj5P225T31 Lonicera japonica HOM05D000336 ORTHO05D000593 1.4e-06 58.9 78 42.3
Nitab4.5_0002135g0040 Nicotiana tabacum HOM05D000336 ORTHO05D000593 1.4e-06 58.9 86 38.4
PSO210G4536 Papaver somniferum HOM05D000336 ORTHO05D000593 1.4e-06 58.9 96 35.4
Prupe.3G124500 Prunus persica HOM05D000336 ORTHO05D000593 1.4e-06 58.9 89 33.7
Hund06480 Selenicereus undatus HOM05D000336 ORTHO05D000593 1.4e-06 58.9 78 41.0
SGA_v2.0_scaffold32G12948 Striga asiatica HOM05D000336 ORTHO05D000593 1.4e-06 58.9 94 35.1
TAR628G1309 Trochodendron aralioides HOM05D000336 ORTHO05D000593 1.4e-06 58.9 110 38.2
ATR0602G184 Amborella trichopoda HOM05D000336 ORTHO05D000593 1.9e-06 58.5 101 29.7
CiPaw.03G185600 Carya illinoinensis HOM05D000336 ORTHO05D000593 1.9e-06 58.5 89 33.7
CDE10G0328 Ceratophyllum demersum HOM05D000336 ORTHO05D000593 1.9e-06 58.5 91 37.4
CDE10G0923 Ceratophyllum demersum HOM05D000336 ORTHO05D000593 1.9e-06 58.5 80 40.0
CBR_g41323 Chara braunii HOM05D000019 ORTHO05D000002 1.9e-06 58.5 74 37.8
MELO3C014351.2 Cucumis melo HOM05D000336 ORTHO05D000593 1.9e-06 58.5 94 35.1
CsaV3_6G037610 Cucumis sativus L. HOM05D000336 ORTHO05D000593 1.9e-06 58.5 94 35.1
DCAR_001843 Daucus carota HOM05D000336 ORTHO05D000593 1.9e-06 58.5 86 38.4
PSO170G4562 Papaver somniferum HOM05D000336 ORTHO05D000593 1.9e-06 58.5 96 35.4
Peaxi162Scf00016g03456 Petunia axillaris HOM05D000336 ORTHO05D000593 1.9e-06 58.5 78 41.0
THA.LOC104823305 Tarenaya hassleriana HOM05D000336 ORTHO05D000593 1.9e-06 58.5 88 37.5
HPP92_002843 Vanilla planifolia HOM05D000336 ORTHO05D000593 1.9e-06 58.5 80 38.8
AT1G73150 Arabidopsis thaliana HOM05D000336 ORTHO05D000593 2.4e-06 58.2 88 38.6
arahy.Tifrunner.gnm1.ann1.303TEV Arachis hypogaea HOM05D000336 ORTHO05D000593 2.4e-06 58.2 78 41.0
arahy.Tifrunner.gnm1.ann1.GEB016 Arachis hypogaea HOM05D000336 ORTHO05D000593 2.4e-06 58.2 78 41.0
arahy.Tifrunner.gnm1.ann1.JI061M Arachis hypogaea HOM05D000336 ORTHO05D000593 2.4e-06 58.2 78 41.0
CAN.G1123.1 Capsicum annuum HOM05D000336 ORTHO05D000593 2.4e-06 58.2 85 36.5
CDE08G0518 Ceratophyllum demersum HOM05D000336 ORTHO05D000593 2.4e-06 58.2 89 33.7
COL.COLO4_17609 Corchorus olitorius HOM05D000336 ORTHO05D000593 2.4e-06 58.2 83 39.8
Gohir.A05G373600 Gossypium hirsutum HOM05D000336 ORTHO05D000593 2.4e-06 58.2 93 34.4
HanXRQChr03g0071061 Helianthus annuus HOM05D000336 ORTHO05D000593 2.4e-06 58.2 78 39.7
Lsat_1_v5_gn_9_99621 Lactuca sativa HOM05D000336 ORTHO05D000593 2.4e-06 58.2 99 29.3
Prupe.8G075200 Prunus persica HOM05D000336 ORTHO05D000593 2.4e-06 58.2 101 35.6
Rhsim06G0205200 Rhododendron simsii HOM05D000336 ORTHO05D000593 2.4e-06 58.2 90 32.2
Sabra13G0100300 Salix brachista HOM05D000336 ORTHO05D000593 2.4e-06 58.2 102 31.4
Hund00980 Selenicereus undatus HOM05D000336 ORTHO05D000593 2.4e-06 58.2 89 33.7
Sopen12g005960 Solanum pennellii HOM05D000336 ORTHO05D000593 2.4e-06 58.2 117 30.8
Actinidia10979 Actinidia chinensis HOM05D000336 ORTHO05D000593 3.2e-06 57.8 90 33.3
Actinidia31605 Actinidia chinensis HOM05D000336 ORTHO05D000593 3.2e-06 57.8 90 32.2
CANSAT35G1822 Cannabis sativa HOM05D000336 ORTHO05D000593 3.2e-06 57.8 84 36.9
CiPaw.11G163300 Carya illinoinensis HOM05D000336 ORTHO05D000593 3.2e-06 57.8 88 34.1
Cc02_g32330 Coffea canephora HOM05D000336 ORTHO05D000593 3.2e-06 57.8 102 31.4
Cc05_g11400 Coffea canephora HOM05D000336 ORTHO05D000593 3.2e-06 57.8 102 31.4
Cc07_g07840 Coffea canephora HOM05D000336 ORTHO05D000593 3.2e-06 57.8 78 41.0
Dinv16034 Davidia involucrata HOM05D000336 ORTHO05D000593 3.2e-06 57.8 78 39.7
Hma1.2p1_0002F.1_g002640 Hydrangea macrophylla HOM05D000336 ORTHO05D000593 3.2e-06 57.8 90 34.4
Hma1.2p1_0178F.1_g079043 Hydrangea macrophylla HOM05D000336 ORTHO05D000593 3.2e-06 57.8 90 34.4
Lsat_1_v5_gn_9_113801 Lactuca sativa HOM05D000336 ORTHO05D000593 3.2e-06 57.8 78 39.7
Lj4g0007650 Lotus japonicus HOM05D000336 ORTHO05D000593 3.2e-06 57.8 78 39.7
Rhsim08G0088500 Rhododendron simsii HOM05D000336 ORTHO05D000593 3.2e-06 57.8 120 35.0
vmacro01901 Vaccinium macrocarpon HOM05D000336 ORTHO05D000593 3.2e-06 57.8 75 42.7
vmacro23359 Vaccinium macrocarpon HOM05D000336 ORTHO05D000593 3.2e-06 57.8 75 42.7
GSVIVG01038522001 Vitis vinifera HOM05D000336 ORTHO05D000593 3.2e-06 57.8 78 39.7
AL2G32900 Arabidopsis lyrata HOM05D000336 ORTHO05D000593 4.2e-06 57.4 88 37.5
Gohir.D04G042000 Gossypium hirsutum HOM05D000336 ORTHO05D000593 4.2e-06 57.4 87 34.5
HanXRQChr17g0565331 Helianthus annuus HOM05D000336 ORTHO05D000593 4.2e-06 57.4 88 36.4
Oeu036092.1 Olea europaea HOM05D000336 ORTHO05D000593 4.2e-06 57.4 85 37.6
PSO356G0008 Papaver somniferum HOM05D000336 ORTHO05D000593 4.2e-06 57.4 78 42.3
PSO541G1010 Papaver somniferum HOM05D000336 ORTHO05D000593 4.2e-06 57.4 78 42.3
Peaxi162Scf00069g02023 Petunia axillaris HOM05D000336 ORTHO05D000593 4.2e-06 57.4 94 33.0
Phvul.005G096700 Phaseolus vulgaris HOM05D000336 ORTHO05D000593 4.2e-06 57.4 104 32.7
PGR042G0683 Punica granatum HOM05D000336 ORTHO05D000593 4.2e-06 57.4 89 34.8
Solyc12g014170.2 Solanum lycopersicum HOM05D000336 ORTHO05D000593 4.2e-06 57.4 117 30.8
SGA_v2.0_scaffold83G26395 Striga asiatica HOM05D000336 ORTHO05D000593 4.2e-06 57.4 142 33.1
THA.LOC104813940 Tarenaya hassleriana HOM05D000336 ORTHO05D000593 4.2e-06 57.4 90 37.8
TAR625G1523 Trochodendron aralioides HOM05D000336 ORTHO05D000593 4.2e-06 57.4 78 42.3
vmacro09231 Vaccinium macrocarpon HOM05D000336 ORTHO05D000593 4.2e-06 57.4 89 34.8
Aa31LG7G2610 Aethionema arabicum HOM05D000336 ORTHO05D000593 5.4e-06 57.0 88 38.6
MSTRG.14953 Avicennia marina HOM05D000336 ORTHO05D000593 5.4e-06 57.0 95 34.7
MSTRG.6800 Avicennia marina HOM05D000336 ORTHO05D000593 5.4e-06 57.0 114 29.8
C06p34280 Brassica napus HOM05D000336 ORTHO05D000593 5.4e-06 57.0 107 30.8
AUR62042314 Chenopodium quinoa HOM05D000336 ORTHO05D000593 5.4e-06 57.0 90 33.3
Ca_01467_v3 Cicer arietinum L. HOM05D000336 ORTHO05D000593 5.4e-06 57.0 89 32.6
ECA236G0678 Erigeron canadensis HOM05D000336 ORTHO05D000593 5.4e-06 57.0 86 34.9
Eucgr.I00604 Eucalyptus grandis HOM05D000336 ORTHO05D000593 5.4e-06 57.0 78 41.0
Gohir.D04G041900 Gossypium hirsutum HOM05D000336 ORTHO05D000593 5.4e-06 57.0 87 34.5
Gorai.012G047300 Gossypium raimondii HOM05D000336 ORTHO05D000593 5.4e-06 57.0 87 34.5
Lsat_1_v5_gn_4_27481 Lactuca sativa HOM05D000336 ORTHO05D000593 5.4e-06 57.0 91 36.3
Mapoly0042s0064 Marchantia polymorpha HOM05D000336 ORTHO05D000593 5.4e-06 57.0 83 36.1
Sed0023305 Sechium edule HOM05D000336 ORTHO05D000593 5.4e-06 57.0 86 37.2
Sc12g0003430 Simmondsia chinensis HOM05D000336 ORTHO05D000593 5.4e-06 57.0 89 33.7
THA.LOC104800865 Tarenaya hassleriana HOM05D000336 ORTHO05D000593 5.4e-06 57.0 89 34.8
TAR381G0068 Trochodendron aralioides HOM05D000336 ORTHO05D000593 5.4e-06 57.0 78 39.7
Zm00001eb119980 Zea mays HOM05D000336 ORTHO05D000593 5.4e-06 57.0 117 31.6
Actinidia02412 Actinidia chinensis HOM05D000336 ORTHO05D000593 7.1e-06 56.6 75 41.3
Aa31LG4G3420 Aethionema arabicum HOM05D000336 ORTHO05D000593 7.1e-06 56.6 88 37.5
Ah.01g015450 Amaranthus hybridus HOM05D000336 ORTHO05D000593 7.1e-06 56.6 91 34.1
Aqoxy1G02188 Aquilegia oxysepala HOM05D000336 ORTHO05D000593 7.1e-06 56.6 75 37.3
EL10Ac9g20871 Beta vulgaris HOM05D000336 ORTHO05D000593 7.1e-06 56.6 91 31.9
BcaB01g05520 Brassica carinata HOM05D000336 ORTHO05D000593 7.1e-06 56.6 122 32.8
A03p04650 Brassica napus HOM05D000336 ORTHO05D000593 7.1e-06 56.6 122 32.8
C03p05330 Brassica napus HOM05D000336 ORTHO05D000593 7.1e-06 56.6 122 32.8
BolC3t13046H Brassica oleracea HOM05D000336 ORTHO05D000593 7.1e-06 56.6 122 32.8
BraA03t09806Z Brassica rapa HOM05D000336 ORTHO05D000593 7.1e-06 56.6 122 32.8
CANSAT64G0120 Cannabis sativa HOM05D000336 ORTHO05D000593 7.1e-06 56.6 89 34.8
Ciclev10007829m.g Citrus clementina HOM05D000336 ORTHO05D000593 7.1e-06 56.6 69 40.6
Haze_03933 Corylus avellana HOM05D000336 ORTHO05D000593 7.1e-06 56.6 94 36.2
Eucgr.F01207 Eucalyptus grandis HOM05D000336 ORTHO05D000593 7.1e-06 56.6 69 37.7
Lalb_Chr19g0134961 Lupinus albus HOM05D000336 ORTHO05D000593 7.1e-06 56.6 75 40.0
Oeu033794.2 Olea europaea HOM05D000336 ORTHO05D000593 7.1e-06 56.6 82 37.8
Peaxi162Scf01503g00017 Petunia axillaris HOM05D000336 ORTHO05D000593 7.1e-06 56.6 102 29.4
Sed0017505 Sechium edule HOM05D000336 ORTHO05D000593 7.1e-06 56.6 87 35.6
Sc03g0010390 Simmondsia chinensis HOM05D000336 ORTHO05D000593 7.1e-06 56.6 87 34.5
TAR381G1197 Trochodendron aralioides HOM05D000336 ORTHO05D000593 7.1e-06 56.6 78 39.7
Actinidia16398 Actinidia chinensis HOM05D000336 ORTHO05D000593 9.3e-06 56.2 78 42.3
Actinidia22783 Actinidia chinensis HOM05D000336 ORTHO05D000593 9.3e-06 56.2 78 42.3
Ah.01g024180 Amaranthus hybridus HOM05D000336 ORTHO05D000593 9.3e-06 56.2 78 39.7
CANSAT54G0865 Cannabis sativa HOM05D000336 ORTHO05D000593 9.3e-06 56.2 78 38.5
CAN.G782.9 Capsicum annuum HOM05D000336 ORTHO05D000593 9.3e-06 56.2 85 37.6
Cpa.g.sc209.24 Carica papaya HOM05D000336 ORTHO05D000593 9.3e-06 56.2 75 38.7
Duzib248G0904 Durio zibethinus HOM05D000336 ORTHO05D000593 9.3e-06 56.2 78 39.7
Gohir.A05G373800 Gossypium hirsutum HOM05D000336 ORTHO05D000593 9.3e-06 56.2 87 34.5
Gohir.A13G049400 Gossypium hirsutum HOM05D000336 ORTHO05D000593 9.3e-06 56.2 78 39.7
Gohir.D13G047900 Gossypium hirsutum HOM05D000336 ORTHO05D000593 9.3e-06 56.2 78 39.7
Gorai.013G053500 Gossypium raimondii HOM05D000336 ORTHO05D000593 9.3e-06 56.2 78 39.7
HanXRQChr09g0248451 Helianthus annuus HOM05D000336 ORTHO05D000593 9.3e-06 56.2 78 38.5
MD05G1049900 Malus domestica HOM05D000336 ORTHO05D000593 9.3e-06 56.2 101 33.7
MD11G1259300 Malus domestica HOM05D000336 ORTHO05D000593 9.3e-06 56.2 88 34.1
PGR083G0542 Punica granatum HOM05D000336 ORTHO05D000593 9.3e-06 56.2 78 35.9
Sabra19G0100900 Salix brachista HOM05D000336 ORTHO05D000593 9.3e-06 56.2 89 32.6
Sabra19G0104300 Salix brachista HOM05D000336 ORTHO05D000593 9.3e-06 56.2 89 32.6
Hund02245 Selenicereus undatus HOM05D000336 ORTHO05D000593 9.3e-06 56.2 103 32.0
Hund02249 Selenicereus undatus HOM05D000336 ORTHO05D000593 9.3e-06 56.2 92 35.9
Sc16g0007430 Simmondsia chinensis HOM05D000336 ORTHO05D000593 9.3e-06 56.2 87 33.3
Thecc.02G124900 Theobroma cacao HOM05D000336 ORTHO05D000593 9.3e-06 56.2 78 39.7


User provided reference genes

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