Gene: Sopen12g005960

General Information

Structural Information

  • Species Solanum pennellii
  • Gene Identifier Sopen12g005960
  • Transcript Identifier Sopen12g005960.1
  • Gene Type Coding gene
  • Location Spenn-ch12 : 4550503-4552979 : negative

Gene Family Information

  • ID HOM05D000336
  • #Genes/#Species 1390/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Sopen12g005960.1

Descriptions

  • Description This gene is predicted to encode a bromodomain-containing protein. Plant lines expressing RNAi constructs targeted against GTE4 show some resistance to agrobacterium-mediated root transformation. | global transcription factor group E4 (GTE4) | FUNCTIONS IN: DNA binding | INVOLVED IN: DNA mediated transformation, cell cycle, root development | LOCATED IN: cellular_component unknown | EXPRESSED IN: 23 plant structures | EXPRESSED DURING: 13 growth stages | CONTAINS InterPro DOMAIN/s: Bromodomain | BEST Arabidopsis thaliana protein match is: DNA-binding bromodomain-containing protein ., Bromodomain
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Functional Annotation

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005515
IEA
InterProprotein binding

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR038336 NET domain superfamily
IPR001487 Bromodomain
IPR037377 Putative transcription factor GTE, bromodomain
IPR027353 NET domain
IPR036427 Bromodomain-like superfamily
Mapman id Description
15.5.52 RNA biosynthesis.transcriptional regulation.transcriptional co-activator (BET/GTE)