Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CBR_g39242 Chara braunii HOM05D002017 ORTHO05D002042 9.3e-128 460.3 246 100.0
COL.COLO4_32957 Corchorus olitorius HOM05D002017 ORTHO05D002042 7.9e-10 68.6 126 42.9
Oeu006132.1 Olea europaea HOM05D002017 ORTHO05D002042 1.0e-09 68.2 77 55.8
Zm00001eb357410 Zea mays HOM05D002017 ORTHO05D002042 1.8e-09 67.4 203 34.0
unitig_0.g2280 Utricularia gibba HOM05D002017 ORTHO05D002042 5.1e-09 65.9 191 37.2
THA.LOC104808078 Tarenaya hassleriana HOM05D002017 ORTHO05D002042 1.9e-08 63.9 190 34.2
Medtr2g070740 Medicago truncatula HOM05D002017 ORTHO05D002042 2.5e-08 63.5 114 41.2
Manes.10G067400 Manihot esculenta HOM05D002017 ORTHO05D002042 3.3e-08 63.2 148 32.4
Haze_09265 Corylus avellana HOM05D002017 ORTHO05D002042 4.3e-08 62.8 120 43.3
SMO367G0908 Selaginella moellendorffii HOM05D002017 ORTHO05D002042 4.3e-08 62.8 66 53.0
AagrBONN_evm.TU.Sc2ySwM_228.4386 Anthoceros agrestis HOM05D002017 ORTHO05D002042 5.6e-08 62.4 65 60.0
Ciclev10021131m.g Citrus clementina HOM05D002017 ORTHO05D002042 5.6e-08 62.4 137 37.2
Oeu026466.1 Olea europaea HOM05D002017 ORTHO05D002042 9.6e-08 61.6 95 45.3
Sp1g15250 Schrenkiella parvula HOM05D002017 ORTHO05D002042 1.3e-07 61.2 88 44.3
THA.LOC104813980 Tarenaya hassleriana HOM05D002017 ORTHO05D002042 1.3e-07 61.2 184 34.8
Lalb_Chr25g0285411 Lupinus albus HOM05D002017 ORTHO05D002042 2.1e-07 60.5 76 50.0
Aqoxy2G03913 Aquilegia oxysepala HOM05D002017 ORTHO05D002042 2.8e-07 60.1 76 48.7
FAN21G0116 Fragaria x ananassa HOM05D002017 ORTHO05D002042 2.8e-07 60.1 240 29.2
FAN25G0096 Fragaria x ananassa HOM05D002017 ORTHO05D002042 2.8e-07 60.1 240 29.2
Glyma.13G259300 Glycine max HOM05D002017 ORTHO05D002042 2.8e-07 60.1 136 37.5
Oeu006141.1 Olea europaea HOM05D002017 ORTHO05D002042 2.8e-07 60.1 144 41.0
TPR.G22993 Trifolium pratense HOM05D002017 ORTHO05D002042 2.8e-07 60.1 114 38.6
Lj4g0014188 Lotus japonicus HOM05D002017 ORTHO05D002042 3.7e-07 59.7 65 52.3
Medtr1g073720 Medicago truncatula HOM05D002017 ORTHO05D002042 3.7e-07 59.7 65 52.3
Medtr8g008730 Medicago truncatula HOM05D002017 ORTHO05D002042 3.7e-07 59.7 114 39.5
Sc18g0004260 Simmondsia chinensis HOM05D002017 ORTHO05D002042 3.7e-07 59.7 133 39.1
VMungo0720G2051 Vigna mungo HOM05D002017 ORTHO05D002042 3.7e-07 59.7 81 46.9
BcaB02g06687 Brassica carinata HOM05D002017 ORTHO05D002042 4.8e-07 59.3 66 53.0
BcaC07g41401 Brassica carinata HOM05D002017 ORTHO05D002042 4.8e-07 59.3 66 53.0
A06p13020 Brassica napus HOM05D002017 ORTHO05D002042 4.8e-07 59.3 66 53.0
C08p44050 Brassica napus HOM05D002017 ORTHO05D002042 4.8e-07 59.3 66 53.0
BraA06t24461Z Brassica rapa HOM05D002017 ORTHO05D002042 4.8e-07 59.3 66 53.0
Carub.0001s1686 Capsella rubella HOM05D002017 ORTHO05D002042 4.8e-07 59.3 66 53.0
AT1G17130 Arabidopsis thaliana HOM05D002017 ORTHO05D002042 6.2e-07 58.9 183 33.3
CSS0015685 Camellia sinensis var. sinensis HOM05D002017 ORTHO05D002042 6.2e-07 58.9 91 44.0
FAN21G3406 Fragaria x ananassa HOM05D002017 ORTHO05D002042 6.2e-07 58.9 44 68.2
Gohir.D02G008400 Gossypium hirsutum HOM05D002017 ORTHO05D002042 6.2e-07 58.9 191 33.5
Gorai.005G010000 Gossypium raimondii HOM05D002017 ORTHO05D002042 6.2e-07 58.9 191 33.5
Lsat_1_v5_gn_7_3521 Lactuca sativa HOM05D002017 ORTHO05D002042 6.2e-07 58.9 77 48.1
Psat0s1301g0040 Pisum sativum HOM05D002017 ORTHO05D002042 6.2e-07 58.9 89 49.4
GSVIVG01005341001 Vitis vinifera HOM05D002017 ORTHO05D002042 6.2e-07 58.9 44 68.2
CiPaw.07G066900 Carya illinoinensis HOM05D002017 ORTHO05D002042 8.1e-07 58.5 160 33.8
Ca_11080_v3 Cicer arietinum L. HOM05D002017 ORTHO05D002042 8.1e-07 58.5 89 48.3
DCAR_019009 Daucus carota HOM05D002017 ORTHO05D002042 8.1e-07 58.5 135 36.3
Mapoly0064s0067 Marchantia polymorpha HOM05D002017 ORTHO05D002042 8.1e-07 58.5 65 50.8
QL09p032443 Quercus lobata HOM05D002017 ORTHO05D002042 8.1e-07 58.5 170 34.1
TPR.G26605 Trifolium pratense HOM05D002017 ORTHO05D002042 8.1e-07 58.5 89 48.3
Ah.14g079500 Amaranthus hybridus HOM05D002017 ORTHO05D002042 1.1e-06 58.2 116 41.4
Atru.chr2.655 Acer truncatum HOM05D002017 ORTHO05D002042 1.4e-06 57.8 98 40.8
CsaV3_5G014010 Cucumis sativus L. HOM05D002017 ORTHO05D002042 1.4e-06 57.8 45 71.1
CsaV3_UNG170320 Cucumis sativus L. HOM05D002017 ORTHO05D002042 1.4e-06 57.8 106 43.4
Thhalv10007973m.g Eutrema salsugineum HOM05D002017 ORTHO05D002042 1.4e-06 57.8 66 51.5
Glyma.15G248800 Glycine max HOM05D002017 ORTHO05D002042 1.4e-06 57.8 135 36.3
Gohir.D02G007900 Gossypium hirsutum HOM05D002017 ORTHO05D002042 1.4e-06 57.8 91 42.9
Gorai.005G009400 Gossypium raimondii HOM05D002017 ORTHO05D002042 1.4e-06 57.8 91 42.9
vmacro12014 Vaccinium macrocarpon HOM05D002017 ORTHO05D002042 1.4e-06 57.8 54 57.4
FAN11G4027 Fragaria x ananassa HOM05D002017 ORTHO05D002042 1.8e-06 57.4 240 27.5
Lju432A3G19 Lonicera japonica HOM05D002017 ORTHO05D002042 1.8e-06 57.4 76 48.7
Peaxi162Scf00213g01420 Petunia axillaris HOM05D002017 ORTHO05D002042 1.8e-06 57.4 51 58.8
SHI14910 Sapria himalayana HOM05D002017 ORTHO05D002042 1.8e-06 57.4 112 35.7
Actinidia12842 Actinidia chinensis HOM05D002017 ORTHO05D002042 2.4e-06 57.0 187 34.2
Ah.00g001210 Amaranthus hybridus HOM05D002017 ORTHO05D002042 2.4e-06 57.0 34 82.4
Ah.00g001220 Amaranthus hybridus HOM05D002017 ORTHO05D002042 2.4e-06 57.0 34 82.4
Ah.04g160610 Amaranthus hybridus HOM05D002017 ORTHO05D002042 2.4e-06 57.0 34 82.4
Ah.04g160620 Amaranthus hybridus HOM05D002017 ORTHO05D002042 2.4e-06 57.0 34 82.4
Ah.04g160630 Amaranthus hybridus HOM05D002017 ORTHO05D002042 2.4e-06 57.0 34 82.4
Ah.04g160640 Amaranthus hybridus HOM05D002017 ORTHO05D002042 2.4e-06 57.0 34 82.4
Ah.04g160650 Amaranthus hybridus HOM05D002017 ORTHO05D002042 2.4e-06 57.0 34 82.4
Ah.14g079460 Amaranthus hybridus HOM05D002017 ORTHO05D002042 2.4e-06 57.0 44 65.9
Ah.14g085950 Amaranthus hybridus HOM05D002017 ORTHO05D002042 2.4e-06 57.0 67 52.2
arahy.Tifrunner.gnm1.ann1.0E0Z25 Arachis hypogaea HOM05D002017 ORTHO05D002042 2.4e-06 57.0 191 33.0
Cfa000062 Carpinus fangiana HOM05D002017 ORTHO05D002042 2.4e-06 57.0 182 34.6
Cfa019526 Carpinus fangiana HOM05D002017 ORTHO05D002042 2.4e-06 57.0 34 82.4
Cfa019527 Carpinus fangiana HOM05D002017 ORTHO05D002042 2.4e-06 57.0 34 82.4
Haze_01580 Corylus avellana HOM05D002017 ORTHO05D002042 2.4e-06 57.0 34 82.4
Haze_13409 Corylus avellana HOM05D002017 ORTHO05D002042 2.4e-06 57.0 41 73.2
Eucgr.F03206 Eucalyptus grandis HOM05D002017 ORTHO05D002042 2.4e-06 57.0 141 36.9
Gohir.A02G008200 Gossypium hirsutum HOM05D002017 ORTHO05D002042 2.4e-06 57.0 148 36.5
Gohir.D02G008200 Gossypium hirsutum HOM05D002017 ORTHO05D002042 2.4e-06 57.0 116 37.9
Prupe.4G148700 Prunus persica HOM05D002017 ORTHO05D002042 2.4e-06 57.0 132 38.6
Sabra11G0093000 Salix brachista HOM05D002017 ORTHO05D002042 2.4e-06 57.0 155 32.3
Ah.04g160580 Amaranthus hybridus HOM05D002017 ORTHO05D002042 3.1e-06 56.6 68 51.5
Ah.04g160670 Amaranthus hybridus HOM05D002017 ORTHO05D002042 3.1e-06 56.6 68 51.5
Ah.14g079520 Amaranthus hybridus HOM05D002017 ORTHO05D002042 3.1e-06 56.6 68 51.5
Ah.14g079530 Amaranthus hybridus HOM05D002017 ORTHO05D002042 3.1e-06 56.6 68 51.5
MSTRG.14277 Avicennia marina HOM05D002017 ORTHO05D002042 3.1e-06 56.6 147 36.1
FvH4_1g15490 Fragaria vesca HOM05D002017 ORTHO05D002042 3.1e-06 56.6 117 40.2
Nitab4.5_0007734g0060 Nicotiana tabacum HOM05D002017 ORTHO05D002042 3.1e-06 56.6 82 46.3
Potri.001G377800 Populus trichocarpa HOM05D002017 ORTHO05D002042 3.1e-06 56.6 66 51.5
SEGI_27076 Sequoiadendron giganteum HOM05D002017 ORTHO05D002042 3.1e-06 56.6 125 37.6
TWI73G0955 Tripterygium wilfordii HOM05D002017 ORTHO05D002042 3.1e-06 56.6 138 36.2
C05p15480 Brassica napus HOM05D002017 ORTHO05D002042 4.0e-06 56.2 262 28.6
DCAR_029474 Daucus carota HOM05D002017 ORTHO05D002042 4.0e-06 56.2 146 34.9
Nitab4.5_0009273g0040 Nicotiana tabacum HOM05D002017 ORTHO05D002042 4.0e-06 56.2 82 46.3
TAR629G1564 Trochodendron aralioides HOM05D002017 ORTHO05D002042 4.0e-06 56.2 66 50.0
MELO3C001317.2 Cucumis melo HOM05D002017 ORTHO05D002042 5.3e-06 55.8 45 68.9
PSO063G7396 Papaver somniferum HOM05D002017 ORTHO05D002042 5.3e-06 55.8 116 37.1
ATR0681G207 Amborella trichopoda HOM05D002017 ORTHO05D002042 6.9e-06 55.5 41 70.7
arahy.Tifrunner.gnm1.ann1.CTV4I1 Arachis hypogaea HOM05D002017 ORTHO05D002042 6.9e-06 55.5 191 32.5
EL10Ac2g03269 Beta vulgaris HOM05D002017 ORTHO05D002042 6.9e-06 55.5 130 36.9
CSS0006094 Camellia sinensis var. sinensis HOM05D002017 ORTHO05D002042 6.9e-06 55.5 50 60.0
CSS0037022 Camellia sinensis var. sinensis HOM05D002017 ORTHO05D002042 6.9e-06 55.5 91 42.9
CANSAT01G1906 Cannabis sativa HOM05D002017 ORTHO05D002042 6.9e-06 55.5 34 79.4
CANSAT25G0580 Cannabis sativa HOM05D002017 ORTHO05D002042 6.9e-06 55.5 34 79.4
CANSAT25G3058 Cannabis sativa HOM05D002017 ORTHO05D002042 6.9e-06 55.5 34 79.4
Ca_03393_v3 Cicer arietinum L. HOM05D002017 ORTHO05D002042 6.9e-06 55.5 172 32.6
Ca_29680_v3 Cicer arietinum L. HOM05D002017 ORTHO05D002042 6.9e-06 55.5 172 32.6
MBI10_g30417_MAGBIO Magnolia biondii HOM05D002017 ORTHO05D002042 6.9e-06 55.5 190 32.1
AL1G29340 Arabidopsis lyrata HOM05D002017 ORTHO05D002042 9.0e-06 55.1 238 29.0
Hund02319 Selenicereus undatus HOM05D002017 ORTHO05D002042 9.0e-06 55.1 197 32.0


User provided reference genes

Program Settings