Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CBR_g39024 Chara braunii HOM05D005190 ORTHO05D006183 3.6e-73 278.1 136 100.0
Pp3c3_17800 Physcomitrium patens HOM05D005190 ORTHO05D006183 1.9e-37 159.5 133 62.4
Mapoly0004s0269 Marchantia polymorpha HOM05D005190 ORTHO05D006183 1.2e-36 156.8 131 61.8
Peaxi162Scf00074g00538 Petunia axillaris HOM05D005190 ORTHO05D006183 1.3e-35 153.3 128 61.7
Solyc08g082740.4 Solanum lycopersicum HOM05D005190 ORTHO05D006183 1.8e-35 152.9 128 60.2
Sopen08g030970 Solanum pennellii HOM05D005190 ORTHO05D006183 1.8e-35 152.9 128 60.2
PGSC0003DMG400012133 Solanum tuberosum HOM05D005190 ORTHO05D006183 3.0e-35 152.1 128 58.6
Nitab4.5_0002367g0140 Nicotiana tabacum HOM05D005190 ORTHO05D006183 8.7e-35 150.6 128 60.2
CAN.G567.34 Capsicum annuum HOM05D005190 ORTHO05D006183 1.1e-34 150.2 128 60.2
AUR62002533 Chenopodium quinoa HOM05D005190 ORTHO05D006183 3.3e-34 148.7 132 56.8
Dinv09552 Davidia involucrata HOM05D005190 ORTHO05D006183 3.3e-34 148.7 132 59.1
Dinv10386 Davidia involucrata HOM05D005190 ORTHO05D006183 3.3e-34 148.7 132 59.1
Nitab4.5_0002793g0070 Nicotiana tabacum HOM05D005190 ORTHO05D006183 1.3e-33 146.7 128 59.4
SEGI_18361 Sequoiadendron giganteum HOM05D005190 ORTHO05D006183 2.8e-33 145.6 132 56.8
AUR62023660 Chenopodium quinoa HOM05D005190 ORTHO05D006183 3.7e-33 145.2 132 55.3
Nn3g18945 Nelumbo nucifera HOM05D005190 ORTHO05D006183 1.4e-32 143.3 128 58.6
Actinidia01056 Actinidia chinensis HOM05D005190 ORTHO05D006183 1.8e-32 142.9 128 60.2
Ciclev10006189m.g Citrus clementina HOM05D005190 ORTHO05D006183 1.8e-32 142.9 128 57.0
Cc07_g19070 Coffea canephora HOM05D005190 ORTHO05D006183 5.3e-32 141.4 128 60.9
EL10Ac3g06230 Beta vulgaris HOM05D005190 ORTHO05D006183 6.9e-32 141.0 132 56.8
Oeu009981.1 Olea europaea HOM05D005190 ORTHO05D006183 6.9e-32 141.0 128 60.2
Cpa.g.sc146.40 Carica papaya HOM05D005190 ORTHO05D006183 9.0e-32 140.6 136 55.9
Hma1.2p1_0013F.1_g007820 Hydrangea macrophylla HOM05D005190 ORTHO05D006183 1.5e-31 139.8 132 57.6
Manes.17G016100 Manihot esculenta HOM05D005190 ORTHO05D006183 2.0e-31 139.4 132 58.3
Medtr7g096570 Medicago truncatula HOM05D005190 ORTHO05D006183 2.6e-31 139.0 132 54.5
CSS0027522 Camellia sinensis var. sinensis HOM05D005190 ORTHO05D006183 3.4e-31 138.7 129 58.9
CSS0047604 Camellia sinensis var. sinensis HOM05D005190 ORTHO05D006183 3.4e-31 138.7 129 58.9
MD13G1144000 Malus domestica HOM05D005190 ORTHO05D006183 3.4e-31 138.7 132 55.3
SGA_v2.0_scaffold36G14289 Striga asiatica HOM05D005190 ORTHO05D006183 4.5e-31 138.3 128 57.8
TPR.G12566 Trifolium pratense HOM05D005190 ORTHO05D006183 5.8e-31 137.9 132 53.8
TPR.G22255 Trifolium pratense HOM05D005190 ORTHO05D006183 7.6e-31 137.5 132 53.8
Lj4g0016109 Lotus japonicus HOM05D005190 ORTHO05D006183 1.0e-30 137.1 132 51.5
MSTRG.12184 Avicennia marina HOM05D005190 ORTHO05D006183 2.2e-30 136.0 128 58.6
Duzib235G0490 Durio zibethinus HOM05D005190 ORTHO05D006183 2.2e-30 136.0 132 55.3
Prupe.8G102200 Prunus persica HOM05D005190 ORTHO05D006183 2.2e-30 136.0 132 56.1
Ca_02362_v3 Cicer arietinum L. HOM05D005190 ORTHO05D006183 2.9e-30 135.6 128 58.6
FvH4_4g21210 Fragaria vesca HOM05D005190 ORTHO05D006183 2.9e-30 135.6 132 57.6
FAN12G1005 Fragaria x ananassa HOM05D005190 ORTHO05D006183 2.9e-30 135.6 132 57.6
FAN17G1108 Fragaria x ananassa HOM05D000385 ORTHO05D006183 2.9e-30 135.6 133 57.1
Lalb_Chr13g0298851 Lupinus albus HOM05D005190 ORTHO05D006183 2.9e-30 135.6 128 53.1
FAN07G0799 Fragaria x ananassa HOM05D005190 ORTHO05D006183 3.8e-30 135.2 132 57.6
MELO3C006747.2 Cucumis melo HOM05D005190 ORTHO05D006183 4.9e-30 134.8 132 57.6
HanXRQChr06g0166421 Helianthus annuus HOM05D005190 ORTHO05D006183 4.9e-30 134.8 132 53.8
HPP92_019515 Vanilla planifolia HOM05D005190 ORTHO05D006183 4.9e-30 134.8 128 54.7
arahy.Tifrunner.gnm1.ann1.JER3JH Arachis hypogaea HOM05D005190 ORTHO05D006183 6.5e-30 134.4 132 53.8
CsaV3_3G015480 Cucumis sativus L. HOM05D005190 ORTHO05D006183 6.5e-30 134.4 132 56.8
Sed0026997 Sechium edule HOM05D005190 ORTHO05D006183 6.5e-30 134.4 132 55.3
AagrBONN_evm.TU.Sc2ySwM_362.2360 Anthoceros agrestis HOM05D005190 ORTHO05D006183 8.4e-30 134.0 131 52.7
DCAR_006510 Daucus carota HOM05D005190 ORTHO05D006183 8.4e-30 134.0 128 54.7
Glyma.16G146000 Glycine max HOM05D005190 ORTHO05D006183 8.4e-30 134.0 132 56.1
TAR636G2254 Trochodendron aralioides HOM05D005190 ORTHO05D006183 8.4e-30 134.0 132 57.6
ECA246G1588 Erigeron canadensis HOM05D005190 ORTHO05D006183 1.1e-29 133.7 132 55.3
Phvul.004G071200 Phaseolus vulgaris HOM05D005190 ORTHO05D006183 1.1e-29 133.7 132 55.3
Potri.015G036700 Populus trichocarpa HOM05D005190 ORTHO05D006183 1.1e-29 133.7 132 56.1
CsaV3_4G025830 Cucumis sativus L. HOM05D005190 ORTHO05D006183 1.4e-29 133.3 132 54.5
Glyma.02G064900 Glycine max HOM05D005190 ORTHO05D006183 1.4e-29 133.3 128 57.0
SalBow4G3050 Salvia bowleyana HOM05D005190 ORTHO05D006183 1.4e-29 133.3 128 55.5
THA.LOC104800562 Tarenaya hassleriana HOM05D005190 ORTHO05D006183 1.4e-29 133.3 128 54.7
arahy.Tifrunner.gnm1.ann1.CG6LTA Arachis hypogaea HOM05D005190 ORTHO05D006183 1.9e-29 132.9 132 53.8
Gohir.A06G195300 Gossypium hirsutum HOM05D005190 ORTHO05D006183 1.9e-29 132.9 132 54.5
Phvul.004G071300 Phaseolus vulgaris HOM05D005190 ORTHO05D006183 1.9e-29 132.9 132 55.3
Sabra15G0031200 Salix brachista HOM05D005190 ORTHO05D006183 1.9e-29 132.9 132 55.3
Sc06g0001490 Simmondsia chinensis HOM05D005190 ORTHO05D006183 1.9e-29 132.9 132 55.3
SGA_v2.0_scaffold198G41066 Striga asiatica HOM05D005190 ORTHO05D006183 1.9e-29 132.9 128 56.2
arahy.Tifrunner.gnm1.ann1.R3ADAS Arachis hypogaea HOM05D005190 ORTHO05D006183 2.5e-29 132.5 127 55.1
CANSAT35G0272 Cannabis sativa HOM05D005190 ORTHO05D006183 2.5e-29 132.5 128 56.2
Gohir.D06G202900 Gossypium hirsutum HOM05D005190 ORTHO05D006183 2.5e-29 132.5 132 54.5
Gorai.010G236800 Gossypium raimondii HOM05D005190 ORTHO05D006183 2.5e-29 132.5 132 54.5
Thecc.06G136600 Theobroma cacao HOM05D005190 ORTHO05D006183 2.5e-29 132.5 128 57.8
TAR629G3462 Trochodendron aralioides HOM05D005190 ORTHO05D006183 2.5e-29 132.5 132 54.5
ATR0730G183 Amborella trichopoda HOM05D005190 ORTHO05D006183 3.2e-29 132.1 133 54.9
Potri.012G045500 Populus trichocarpa HOM05D005190 ORTHO05D006183 3.2e-29 132.1 132 54.5
RcHm_v2.0_Chr4g0426821 Rosa chinensis HOM05D005190 ORTHO05D006183 3.2e-29 132.1 132 56.1
arahy.Tifrunner.gnm1.ann1.W6NXGM Arachis hypogaea HOM05D005190 ORTHO05D006183 4.2e-29 131.7 127 55.1
CiPaw.01G130900 Carya illinoinensis HOM05D005190 ORTHO05D006183 4.2e-29 131.7 128 57.8
Os06g0342100 Oryza sativa ssp. japonica HOM05D005190 ORTHO05D006183 4.2e-29 131.7 128 52.3
PGR044G0309 Punica granatum HOM05D005190 ORTHO05D006183 4.2e-29 131.7 132 54.5
Haze_00795 Corylus avellana HOM05D005582 ORTHO05D007028 5.5e-29 131.3 128 57.8
TWI38G0007 Tripterygium wilfordii HOM05D005190 ORTHO05D006183 7.1e-29 131.0 128 57.8
GSVIVG01017663001 Vitis vinifera HOM05D005190 ORTHO05D006183 7.1e-29 131.0 132 56.8
Zm00001eb066670 Zea mays HOM05D005190 ORTHO05D006183 7.1e-29 131.0 128 52.3
Zm00001eb081370 Zea mays HOM05D005190 ORTHO05D006183 7.1e-29 131.0 128 52.3
ClCG04G007440 Citrullus lanatus HOM05D005190 ORTHO05D006183 1.2e-28 130.2 132 53.0
QL06p013825 Quercus lobata HOM05D005190 ORTHO05D006183 1.2e-28 130.2 128 57.8
Rhsim04G0247000 Rhododendron simsii HOM05D005190 ORTHO05D006183 1.2e-28 130.2 129 56.6
HanXRQChr17g0534691 Helianthus annuus HOM05D005190 ORTHO05D006183 1.6e-28 129.8 127 55.1
Lalb_Chr07g0181821 Lupinus albus HOM05D005190 ORTHO05D006183 1.6e-28 129.8 128 53.1
TWI63G0483 Tripterygium wilfordii HOM05D005190 ORTHO05D006183 2.1e-28 129.4 128 57.0
GSVIVG01017602001 Vitis vinifera HOM05D005190 ORTHO05D006183 2.1e-28 129.4 132 56.1
Cfa006455 Carpinus fangiana HOM05D005190 ORTHO05D006183 2.7e-28 129.0 128 57.0
MBI19_g06603_MAGBIO Magnolia biondii HOM05D005190 ORTHO05D006183 2.7e-28 129.0 128 53.9
Sabra12G0031600 Salix brachista HOM05D005190 ORTHO05D006183 3.5e-28 128.6 132 53.0
Psat0ss1196g0480 Pisum sativum HOM05D005190 ORTHO05D006183 4.6e-28 128.3 129 51.2
COL.COLO4_30940 Corchorus olitorius HOM05D005190 ORTHO05D006183 7.9e-28 127.5 136 52.9
Duzib192G0082 Durio zibethinus HOM05D005190 ORTHO05D006183 1.0e-27 127.1 132 52.3
Migut.N00575 Erythranthe guttata HOM05D005190 ORTHO05D006183 3.0e-27 125.6 134 53.0
Lsat_1_v5_gn_3_12780 Lactuca sativa HOM05D005190 ORTHO05D006183 8.7e-27 124.0 132 52.3
Lsat_1_v5_gn_6_83381 Lactuca sativa HOM05D005190 ORTHO05D006183 2.5e-26 122.5 114 51.8
Aa31LG10G5580 Aethionema arabicum HOM05D005190 ORTHO05D006183 3.3e-26 122.1 105 59.0
BcaB04g17462 Brassica carinata HOM05D005190 ORTHO05D006183 1.6e-25 119.8 106 55.7
AL1G54730 Arabidopsis lyrata HOM05D005190 ORTHO05D006183 2.2e-25 119.4 105 57.1
BcaC05g27594 Brassica carinata HOM05D005190 ORTHO05D006183 2.2e-25 119.4 136 50.7
A05p21200 Brassica napus HOM05D005190 ORTHO05D006183 2.2e-25 119.4 136 50.7
C05p35790 Brassica napus HOM05D005190 ORTHO05D006183 2.2e-25 119.4 136 50.7
BraA05t21026Z Brassica rapa HOM05D005190 ORTHO05D006183 2.2e-25 119.4 136 50.7
CARHR037790 Cardamine hirsuta HOM05D005190 ORTHO05D006183 2.2e-25 119.4 106 55.7
AL8G32340 Arabidopsis lyrata HOM05D005190 ORTHO05D006183 2.8e-25 119.0 106 56.6
Sp1g35120 Schrenkiella parvula HOM05D005190 ORTHO05D006183 3.7e-25 118.6 106 55.7
AT1G48160 Arabidopsis thaliana HOM05D005190 ORTHO05D006183 4.8e-25 118.2 106 55.7
Thhalv10011800m.g Eutrema salsugineum HOM05D005190 ORTHO05D006183 4.8e-25 118.2 105 56.2
Carub.0001s3725 Capsella rubella HOM05D005190 ORTHO05D006183 8.2e-25 117.5 105 55.2
SMO352G0034 Selaginella moellendorffii HOM05D005190 ORTHO05D006183 8.2e-25 117.5 118 50.0
BcaC07g37169 Brassica carinata HOM05D005190 ORTHO05D006183 1.4e-24 116.7 105 55.2
C08p05420 Brassica napus HOM05D005190 ORTHO05D006183 1.4e-24 116.7 105 55.2
BolC8t47359H Brassica oleracea HOM05D005190 ORTHO05D006183 1.4e-24 116.7 105 55.2
A08p05180 Brassica napus HOM05D005190 ORTHO05D006183 1.8e-24 116.3 105 55.2
BraA08t32536Z Brassica rapa HOM05D005190 ORTHO05D006183 1.8e-24 116.3 105 55.2
PSO782G1806 Papaver somniferum HOM05D005190 ORTHO05D006183 6.9e-24 114.4 111 53.2
TPR.G39662 Trifolium pratense HOM05D005190 ORTHO05D006183 9.0e-24 114.0 119 56.3
PSO478G2609 Papaver somniferum HOM05D005190 ORTHO05D006183 1.5e-23 113.2 105 55.2
BolC5t32295H Brassica oleracea HOM05D005190 ORTHO05D006183 1.0e-22 110.5 98 56.1
MD13G1143900 Malus domestica HOM05D005190 ORTHO05D006183 2.2e-22 109.4 113 53.1
Ah.07g203500 Amaranthus hybridus HOM05D005190 ORTHO05D006183 7.2e-21 104.4 88 55.7
TPR.G16114 Trifolium pratense HOM05D005190 ORTHO05D006183 8.8e-19 97.4 89 55.1
unitig_747.g21355 Utricularia gibba HOM05D001490 ORTHO05D001450 5.7e-18 94.7 126 44.4
BcaC08g43007 Brassica carinata HOM05D005190 ORTHO05D006183 2.8e-17 92.4 70 64.3
MCO01G268 Micromonas commoda HOM05D005190 ORTHO05D006183 2.8e-17 92.4 103 47.6
Cre02.g095070 Chlamydomonas reinhardtii HOM05D005190 ORTHO05D006183 1.1e-16 90.5 97 46.4
arahy.Tifrunner.gnm1.ann1.AFL9DX Arachis hypogaea HOM05D005190 ORTHO05D006183 1.4e-16 90.1 115 47.8
C06p02560 Brassica napus HOM05D005190 ORTHO05D006183 4.5e-15 85.1 96 49.0
BcaC01g01495 Brassica carinata HOM05D005190 ORTHO05D006183 6.5e-14 81.3 133 42.1
PRCOL_00001126 Prasinoderma coloniale HOM05D005190 ORTHO05D006183 2.5e-13 79.3 141 39.7
MBI07_g26367_MAGBIO Magnolia biondii HOM05D005190 ORTHO05D006183 3.2e-13 79.0 111 41.4
Eucgr.G02037 Eucalyptus grandis HOM05D005190 ORTHO05D006183 1.6e-12 76.6 67 58.2
ClCG05G006830 Citrullus lanatus HOM05D005190 ORTHO05D006183 6.1e-12 74.7 50 68.0
vmacro08000 Vaccinium macrocarpon HOM05D005190 ORTHO05D006183 1.8e-11 73.2 78 56.4
Cfa023211 Carpinus fangiana HOM05D005190 ORTHO05D006183 2.3e-11 72.8 101 35.6
BolC6t35384H Brassica oleracea HOM05D005190 ORTHO05D006183 8.8e-11 70.9 46 69.6
Dinv29526 Davidia involucrata HOM05D005190 ORTHO05D006183 9.1e-08 60.8 74 48.6
RcHm_v2.0_Chr7g0219311 Rosa chinensis HOM05D005190 ORTHO05D006183 2.2e-06 56.2 56 48.2
EL10As1g23068 Beta vulgaris HOM05D005190 ORTHO05D006183 2.9e-06 55.8 68 44.1


User provided reference genes

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