Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CBR_g38190 Chara braunii HOM05D006316 ORTHO05D008032 5.3e-137 491.1 266 100.0
SMO358G0571 Selaginella moellendorffii HOM05D006316 ORTHO05D008032 7.3e-70 268.1 213 60.6
Mapoly0059s0054 Marchantia polymorpha HOM05D006316 ORTHO05D008032 2.8e-69 266.2 224 57.1
ATR0796G033 Amborella trichopoda HOM05D006316 ORTHO05D008032 1.3e-61 240.7 232 51.3
AagrBONN_evm.TU.Sc2ySwM_228.3212 Anthoceros agrestis HOM05D006316 ORTHO05D008032 1.6e-61 240.4 216 53.7
TWI74G1230 Tripterygium wilfordii HOM05D006316 ORTHO05D008032 2.6e-59 233.0 223 51.6
Manes.05G122900 Manihot esculenta HOM05D006316 ORTHO05D008032 7.6e-59 231.5 229 51.5
Glyma.13G117200 Glycine max HOM05D006316 ORTHO05D008032 2.2e-58 229.9 221 52.5
GSVIVG01017710001 Vitis vinifera HOM05D006316 ORTHO05D008032 2.2e-58 229.9 220 50.9
Aqoxy2G02444 Aquilegia oxysepala HOM05D006316 ORTHO05D008032 2.9e-58 229.6 224 50.9
Cc07_g19930 Coffea canephora HOM05D006316 ORTHO05D008032 4.9e-58 228.8 222 50.9
CSS0049495 Camellia sinensis var. sinensis HOM05D006316 ORTHO05D008032 6.4e-58 228.4 221 51.1
Phvul.003G124500 Phaseolus vulgaris HOM05D006316 ORTHO05D008032 8.4e-58 228.0 221 52.5
VMungo1215G0091 Vigna mungo HOM05D006316 ORTHO05D008032 8.4e-58 228.0 221 52.0
CSS0037556 Camellia sinensis var. sinensis HOM05D006316 ORTHO05D008032 1.1e-57 227.6 221 50.7
PSO210G4075 Papaver somniferum HOM05D006316 ORTHO05D008032 1.4e-57 227.3 221 51.1
Nn4g25293 Nelumbo nucifera HOM05D006316 ORTHO05D008032 1.9e-57 226.9 231 49.4
Sopen11g008410 Solanum pennellii HOM05D006316 ORTHO05D008032 2.4e-57 226.5 221 52.5
arahy.Tifrunner.gnm1.ann1.NEV66G Arachis hypogaea HOM05D006316 ORTHO05D008032 4.2e-57 225.7 221 51.1
arahy.Tifrunner.gnm1.ann1.ZN6V8N Arachis hypogaea HOM05D006316 ORTHO05D008032 4.2e-57 225.7 221 51.1
PSO761G0163 Papaver somniferum HOM05D006316 ORTHO05D008032 4.2e-57 225.7 221 50.7
CAN.G255.2 Capsicum annuum HOM05D006316 ORTHO05D008032 7.1e-57 224.9 221 51.1
Medtr4g124260 Medicago truncatula HOM05D006316 ORTHO05D008032 9.3e-57 224.6 220 50.5
Hund12266 Selenicereus undatus HOM05D006316 ORTHO05D008032 2.1e-56 223.4 221 49.8
Ciclev10005749m.g Citrus clementina HOM05D006316 ORTHO05D008032 2.7e-56 223.0 221 50.2
Ah.07g202850 Amaranthus hybridus HOM05D006316 ORTHO05D008032 3.5e-56 222.6 231 48.9
CiPaw.01G127100 Carya illinoinensis HOM05D006316 ORTHO05D008032 3.5e-56 222.6 221 49.8
PGR031G3724 Punica granatum HOM05D006316 ORTHO05D008032 3.5e-56 222.6 223 49.8
MSTRG.20325 Avicennia marina HOM05D006316 ORTHO05D008032 4.6e-56 222.2 220 49.5
Migut.B00749 Erythranthe guttata HOM05D006316 ORTHO05D008032 4.6e-56 222.2 221 48.0
SalBow7G1663 Salvia bowleyana HOM05D006316 ORTHO05D008032 7.9e-56 221.5 221 48.9
Sopen11g008420 Solanum pennellii HOM05D006316 ORTHO05D008032 1.0e-55 221.1 225 49.8
Actinidia24554 Actinidia chinensis HOM05D006316 ORTHO05D008032 1.3e-55 220.7 223 48.9
Eucgr.B02199 Eucalyptus grandis HOM05D006316 ORTHO05D008032 1.8e-55 220.3 225 48.9
Lj4g0011706 Lotus japonicus HOM05D006316 ORTHO05D008032 1.8e-55 220.3 221 49.8
Peaxi162Scf00571g00412 Petunia axillaris HOM05D006316 ORTHO05D008032 1.8e-55 220.3 221 49.3
Potri.010G004100 Populus trichocarpa HOM05D006316 ORTHO05D008032 1.8e-55 220.3 222 50.9
Zm00001eb354530 Zea mays HOM05D006316 ORTHO05D008032 2.3e-55 219.9 221 50.2
MELO3C006760.2 Cucumis melo HOM05D006316 ORTHO05D008032 3.9e-55 219.2 227 48.0
DCAR_002560 Daucus carota HOM05D006316 ORTHO05D008032 3.9e-55 219.2 219 49.8
EL10Ac3g06220 Beta vulgaris HOM05D006316 ORTHO05D008032 5.1e-55 218.8 221 48.4
AUR62002525 Chenopodium quinoa HOM05D006316 ORTHO05D008032 6.7e-55 218.4 221 48.0
CsaV3_3G015610 Cucumis sativus L. HOM05D006316 ORTHO05D008032 6.7e-55 218.4 227 48.0
QL06p014723 Quercus lobata HOM05D006316 ORTHO05D008032 6.7e-55 218.4 221 48.9
AL3G30660 Arabidopsis lyrata HOM05D006316 ORTHO05D008032 1.1e-54 217.6 221 49.3
Lalb_Chr12g0200491 Lupinus albus HOM05D006316 ORTHO05D008032 1.1e-54 217.6 228 49.1
TAR365G1184 Trochodendron aralioides HOM05D006316 ORTHO05D008032 1.5e-54 217.2 255 45.9
MD13G1137100 Malus domestica HOM05D006316 ORTHO05D008032 1.9e-54 216.9 221 50.2
Nitab4.5_0000051g0260 Nicotiana tabacum HOM05D006316 ORTHO05D008032 1.9e-54 216.9 221 47.1
Sed0018318 Sechium edule HOM05D006316 ORTHO05D008032 1.9e-54 216.9 223 47.5
Aa31LG8G4460 Aethionema arabicum HOM05D006316 ORTHO05D008032 2.5e-54 216.5 221 50.2
AT3G17590 Arabidopsis thaliana HOM05D006316 ORTHO05D008032 2.5e-54 216.5 221 49.8
CANSAT56G2492 Cannabis sativa HOM05D006316 ORTHO05D008032 4.3e-54 215.7 222 51.4
Nitab4.5_0004737g0050 Nicotiana tabacum HOM05D006316 ORTHO05D008032 4.3e-54 215.7 221 46.6
BraA05t22055Z Brassica rapa HOM05D006316 ORTHO05D008032 5.6e-54 215.3 221 49.3
CARHR092900 Cardamine hirsuta HOM05D006316 ORTHO05D008032 5.6e-54 215.3 221 49.3
Lsat_1_v5_gn_6_117760 Lactuca sativa HOM05D006316 ORTHO05D008032 5.6e-54 215.3 222 49.5
A05p32260 Brassica napus HOM05D006316 ORTHO05D008032 1.3e-53 214.2 221 48.9
CDE12G0513 Ceratophyllum demersum HOM05D006316 ORTHO05D008032 1.3e-53 214.2 227 47.1
C05p48790 Brassica napus HOM05D006316 ORTHO05D008032 2.1e-53 213.4 221 48.4
BolC5t33616H Brassica oleracea HOM05D006316 ORTHO05D008032 2.1e-53 213.4 221 48.4
Lj6A704G50 Lonicera japonica HOM05D006316 ORTHO05D008032 2.1e-53 213.4 220 46.8
Sp3g15720 Schrenkiella parvula HOM05D006316 ORTHO05D008032 2.1e-53 213.4 221 48.9
TPR.G12708 Trifolium pratense HOM05D006316 ORTHO05D008032 2.1e-53 213.4 215 48.8
BcaB06g25834 Brassica carinata HOM05D006316 ORTHO05D008032 2.8e-53 213.0 221 48.9
Carub.0003s1730 Capsella rubella HOM05D006316 ORTHO05D008032 2.8e-53 213.0 221 47.5
Haze_00749 Corylus avellana HOM05D006316 ORTHO05D008032 2.8e-53 213.0 216 49.1
SGA_v2.0_scaffold131G34373 Striga asiatica HOM05D006316 ORTHO05D008032 2.8e-53 213.0 251 44.2
Atru.chr4.3188 Acer truncatum HOM05D006316 ORTHO05D008032 3.7e-53 212.6 220 48.6
BcaC05g28772 Brassica carinata HOM05D006316 ORTHO05D008032 4.8e-53 212.2 221 48.4
HanXRQChr05g0148931 Helianthus annuus HOM05D006316 ORTHO05D008032 4.8e-53 212.2 222 48.6
COL.COLO4_13438 Corchorus olitorius HOM05D006316 ORTHO05D008032 6.2e-53 211.8 221 48.9
Thhalv10021423m.g Eutrema salsugineum HOM05D006316 ORTHO05D008032 1.4e-52 210.7 221 47.1
FAN17G2953 Fragaria x ananassa HOM05D006316 ORTHO05D008032 3.1e-52 209.5 228 47.4
Os02g0723700 Oryza sativa ssp. japonica HOM05D006316 ORTHO05D008032 3.1e-52 209.5 219 47.5
Duzib128G0584 Durio zibethinus HOM05D006316 ORTHO05D008032 4.0e-52 209.1 221 47.1
FvH4_4g21770 Fragaria vesca HOM05D006316 ORTHO05D008032 5.3e-52 208.8 228 47.4
vmacro04190 Vaccinium macrocarpon HOM05D006316 ORTHO05D008032 5.3e-52 208.8 242 45.5
unitig_578.g15959 Utricularia gibba HOM05D006316 ORTHO05D008032 1.5e-51 207.2 229 45.9
ClCG05G006940 Citrullus lanatus HOM05D006316 ORTHO05D008032 2.6e-51 206.5 239 44.8
ECA246G2315 Erigeron canadensis HOM05D006316 ORTHO05D008032 2.6e-51 206.5 229 46.7
CSS0010190 Camellia sinensis var. sinensis HOM05D006316 ORTHO05D008032 3.4e-51 206.1 221 47.1
Gohir.D05G000900 Gossypium hirsutum HOM05D006316 ORTHO05D008032 7.6e-51 204.9 221 46.6
Gorai.009G000800 Gossypium raimondii HOM05D006316 ORTHO05D008032 7.6e-51 204.9 221 46.6
Gohir.A05G000600 Gossypium hirsutum HOM05D006316 ORTHO05D008032 1.3e-50 204.1 221 46.6
SHI09041 Sapria himalayana HOM05D006316 ORTHO05D008032 2.9e-50 203.0 194 53.1
THA.LOC104826519 Tarenaya hassleriana HOM05D006316 ORTHO05D008032 1.1e-49 201.1 167 57.5
RcHm_v2.0_Chr4g0428001 Rosa chinensis HOM05D006316 ORTHO05D008032 1.9e-49 200.3 228 46.1
Gohir.D09G137500 Gossypium hirsutum HOM05D006316 ORTHO05D008032 2.1e-48 196.8 241 44.4
Gohir.A09G135800 Gossypium hirsutum HOM05D006316 ORTHO05D008032 2.7e-48 196.4 221 45.2
FAN12G0215 Fragaria x ananassa HOM05D006316 ORTHO05D008032 3.5e-48 196.1 250 43.2
Cfa015754 Carpinus fangiana HOM05D006316 ORTHO05D008032 2.3e-47 193.4 167 55.1
FAN07G2419 Fragaria x ananassa HOM05D006316 ORTHO05D008032 2.3e-47 193.4 259 41.7
Sabra10G0003500 Salix brachista HOM05D006316 ORTHO05D008032 2.3e-47 193.4 263 43.0
HPP92_002633 Vanilla planifolia HOM05D006316 ORTHO05D008032 1.1e-46 191.0 157 55.4
Sc19g0002500 Simmondsia chinensis HOM05D006316 ORTHO05D008032 9.6e-46 188.0 165 54.5
Psat4g020720 Pisum sativum HOM05D006316 ORTHO05D008032 1.1e-44 184.5 220 43.2
Gorai.006G157900 Gossypium raimondii HOM05D006316 ORTHO05D008032 2.0e-43 180.3 167 52.1
Solyc11g013400.3 Solanum lycopersicum HOM05D006316 ORTHO05D008032 1.9e-41 173.7 185 51.4
TAR362G1307 Trochodendron aralioides HOM05D006316 ORTHO05D008032 5.5e-41 172.2 185 48.1
Prupe.1G208100 Prunus persica HOM05D006316 ORTHO05D008032 6.0e-40 168.7 185 49.2
Thecc.03G258800 Theobroma cacao HOM05D006316 ORTHO05D008032 6.0e-40 168.7 221 41.2
Lj2g0021665 Lotus japonicus HOM05D006316 ORTHO05D008032 9.0e-36 154.8 217 39.2
Rhsim13G0235700 Rhododendron simsii HOM05D006316 ORTHO05D008032 1.5e-35 154.1 256 37.1
AUR62023666 Chenopodium quinoa HOM05D006316 ORTHO05D008032 3.8e-34 149.4 297 33.0
Rhsim04G0168500 Rhododendron simsii HOM05D006316 ORTHO05D008032 4.2e-33 146.0 185 45.4
LjContig00575g0004232 Lotus japonicus HOM05D006316 ORTHO05D008032 9.3e-33 144.8 171 43.9
LjContig00576g0014419 Lotus japonicus HOM05D006316 ORTHO05D008032 9.3e-33 144.8 171 43.9
Lj2g0021371 Lotus japonicus HOM05D006316 ORTHO05D008032 1.6e-32 144.1 169 43.2
Dinv32178 Davidia involucrata HOM05D006316 ORTHO05D008032 4.6e-32 142.5 221 38.0
SEGI_01321 Sequoiadendron giganteum HOM05D006316 ORTHO05D008032 9.7e-30 134.8 125 55.2
Rhsim04G0168300 Rhododendron simsii HOM05D006316 ORTHO05D008032 6.3e-29 132.1 185 41.6
Ca_21361_v3 Cicer arietinum L. HOM05D006316 ORTHO05D008032 1.0e-18 98.2 114 47.4
PGSC0003DMG400027786 Solanum tuberosum HOM05D006316 ORTHO05D008032 3.2e-17 93.2 114 48.2
MBI18_g03841_MAGBIO Magnolia biondii HOM05D006046 ORTHO05D007580 8.8e-15 85.1 70 57.1
Solyc11g013410.2 Solanum lycopersicum HOM05D006316 ORTHO05D008032 4.4e-14 82.8 76 44.7
Glyma.17G042702 Glycine max HOM05D006316 ORTHO05D008032 1.3e-13 81.3 66 50.0
Cpa.g.sc146.8 Carica papaya HOM05D006316 ORTHO05D008032 1.7e-13 80.9 61 54.1
Glyma.09G159500 Glycine max HOM05D006316 ORTHO05D008032 3.1e-12 76.6 154 34.4
Cpa.g.c44700 Carica papaya HOM05D006316 ORTHO05D008032 7.7e-11 72.0 50 62.0
CSS0015998 Camellia sinensis var. sinensis HOM05D006316 ORTHO05D008032 2.2e-10 70.5 89 47.2
Cfa025220 Carpinus fangiana HOM05D006316 ORTHO05D008032 1.0e-07 61.6 154 29.9


User provided reference genes

Program Settings