Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CBR_g38172 Chara braunii HOM05D006539 ORTHO05D008694 0.0e+00 1354.7 737 100.0
SMO228G0204 Selaginella moellendorffii HOM05D006539 ORTHO05D008694 5.9e-69 266.5 240 54.2
SEGI_40704 Sequoiadendron giganteum HOM05D006539 ORTHO05D008694 8.5e-68 262.7 241 53.5
Pp3c12_19160 Physcomitrium patens HOM05D006539 ORTHO05D008694 1.5e-67 261.9 240 54.2
AagrBONN_evm.TU.Sc2ySwM_117.170 Anthoceros agrestis HOM05D006539 ORTHO05D008694 1.6e-66 258.5 239 53.6
TAR371G0397 Trochodendron aralioides HOM05D006539 ORTHO05D008694 1.0e-65 255.8 240 51.7
TAR371G0750 Trochodendron aralioides HOM05D006539 ORTHO05D008694 1.0e-65 255.8 240 51.7
MD17G1055800 Malus domestica HOM05D006539 ORTHO05D008694 8.8e-65 252.7 241 49.8
PGR004G2004 Punica granatum HOM05D006539 ORTHO05D008694 8.8e-65 252.7 235 52.3
Potri.004G122300 Populus trichocarpa HOM05D006539 ORTHO05D008694 1.2e-64 252.3 227 55.1
HPP92_013411 Vanilla planifolia HOM05D006539 ORTHO05D008694 2.0e-64 251.5 245 52.2
arahy.Tifrunner.gnm1.ann1.YFBV2Q Arachis hypogaea HOM05D006539 ORTHO05D008694 2.6e-64 251.1 241 50.6
GSVIVG01011483001 Vitis vinifera HOM05D006539 ORTHO05D008694 2.6e-64 251.1 240 51.2
AUR62018139 Chenopodium quinoa HOM05D006539 ORTHO05D008694 3.4e-64 250.8 227 53.7
CDE06G2615 Ceratophyllum demersum HOM05D006539 ORTHO05D008694 4.4e-64 250.4 241 51.5
Lj1g0006679 Lotus japonicus HOM05D006539 ORTHO05D008694 7.5e-64 249.6 234 52.6
Manes.02G050600 Manihot esculenta HOM05D006539 ORTHO05D008694 7.5e-64 249.6 240 50.4
Mapoly0088s0068 Marchantia polymorpha HOM05D006539 ORTHO05D008694 7.5e-64 249.6 243 47.3
Nn4g23332 Nelumbo nucifera HOM05D006539 ORTHO05D008694 7.5e-64 249.6 232 52.2
Rhsim10G0046900 Rhododendron simsii HOM05D006539 ORTHO05D008694 7.5e-64 249.6 240 52.1
Phvul.008G040300 Phaseolus vulgaris HOM05D006539 ORTHO05D008694 1.3e-63 248.8 234 51.7
Prupe.3G259900 Prunus persica HOM05D006539 ORTHO05D008694 1.3e-63 248.8 240 50.0
Sed0012723 Sechium edule HOM05D003516 ORTHO05D004068 1.3e-63 248.8 240 52.1
Eucgr.I01991 Eucalyptus grandis HOM05D006539 ORTHO05D008694 1.7e-63 248.4 239 51.0
Oeu000853.1 Olea europaea HOM05D006539 ORTHO05D008694 2.2e-63 248.1 240 50.8
Medtr7g012240 Medicago truncatula HOM05D006539 ORTHO05D008694 2.8e-63 247.7 234 52.1
Os07g0598100 Oryza sativa ssp. japonica HOM05D006539 ORTHO05D008694 2.8e-63 247.7 240 50.0
VMungo1383G3577 Vigna mungo HOM05D006539 ORTHO05D008694 2.8e-63 247.7 234 51.3
CiPaw.03G091900 Carya illinoinensis HOM05D006539 ORTHO05D008694 3.7e-63 247.3 241 50.6
TWI32G0765 Tripterygium wilfordii HOM05D006539 ORTHO05D008694 3.7e-63 247.3 233 52.8
ClCG10G015450 Citrullus lanatus HOM05D003516 ORTHO05D004068 4.8e-63 246.9 244 50.8
vmacro05668 Vaccinium macrocarpon HOM05D006539 ORTHO05D008694 4.8e-63 246.9 234 53.0
Cc07_g03820 Coffea canephora HOM05D006539 ORTHO05D008694 6.3e-63 246.5 243 48.6
Duzib264G0172 Durio zibethinus HOM05D006539 ORTHO05D008694 6.3e-63 246.5 241 50.2
Glyma.08G241400 Glycine max HOM05D006539 ORTHO05D008694 6.3e-63 246.5 234 50.0
CANSAT64G0188 Cannabis sativa HOM05D006539 ORTHO05D008694 1.1e-62 245.7 232 51.7
Sabra04G0067100 Salix brachista HOM05D006539 ORTHO05D008694 1.4e-62 245.4 228 53.5
TPR.G33480 Trifolium pratense HOM05D006539 ORTHO05D008694 1.4e-62 245.4 234 51.7
Cpa.g.sc14.138 Carica papaya HOM05D006539 ORTHO05D008694 1.8e-62 245.0 241 50.6
EL10Ac2g03043 Beta vulgaris HOM05D006539 ORTHO05D008694 2.4e-62 244.6 227 52.4
RcHm_v2.0_Chr2g0166661 Rosa chinensis HOM05D006539 ORTHO05D008694 2.4e-62 244.6 240 50.0
SalBow1G8487 Salvia bowleyana HOM05D006539 ORTHO05D008694 3.1e-62 244.2 240 50.4
ATR0111G028 Amborella trichopoda HOM05D006539 ORTHO05D008694 4.1e-62 243.8 244 50.0
Lalb_Chr10g0093241 Lupinus albus HOM05D006539 ORTHO05D008694 7.0e-62 243.0 232 51.7
Sc11g0004810 Simmondsia chinensis HOM05D006539 ORTHO05D008694 7.0e-62 243.0 240 49.2
CsaV3_3G041040 Cucumis sativus L. HOM05D006539 ORTHO05D008694 9.1e-62 242.7 244 49.2
MSTRG.23905 Avicennia marina HOM05D006539 ORTHO05D008694 1.2e-61 242.3 232 49.6
FvH4_6g47560 Fragaria vesca HOM05D006539 ORTHO05D008694 1.2e-61 242.3 240 49.6
FAN05G4473 Fragaria x ananassa HOM05D006539 ORTHO05D008694 1.2e-61 242.3 240 49.6
Carub.0006s1356 Capsella rubella HOM05D006539 ORTHO05D008694 1.6e-61 241.9 242 50.0
DCAR_011065 Daucus carota HOM05D006539 ORTHO05D008694 1.6e-61 241.9 240 49.6
CARHR197920 Cardamine hirsuta HOM05D006539 ORTHO05D008694 2.0e-61 241.5 296 43.2
ECA232G1677 Erigeron canadensis HOM05D006539 ORTHO05D008694 2.0e-61 241.5 240 49.6
Gohir.D11G075300 Gossypium hirsutum HOM05D006539 ORTHO05D008694 2.0e-61 241.5 240 50.0
Gorai.007G080900 Gossypium raimondii HOM05D006539 ORTHO05D008694 2.0e-61 241.5 240 50.0
Zm00001eb326670 Zea mays HOM05D006539 ORTHO05D008694 2.0e-61 241.5 245 48.6
Atru.chr8.368 Acer truncatum HOM05D006539 ORTHO05D008694 3.5e-61 240.7 240 47.9
THA.LOC104822345 Tarenaya hassleriana HOM05D006539 ORTHO05D008694 3.5e-61 240.7 245 48.2
BcaC04g24242 Brassica carinata HOM05D006539 ORTHO05D008694 4.5e-61 240.4 244 48.8
A10p23500 Brassica napus HOM05D006539 ORTHO05D008694 4.5e-61 240.4 244 48.8
C09p61730 Brassica napus HOM05D006539 ORTHO05D008694 5.9e-61 240.0 244 48.8
Ca_06802_v3 Cicer arietinum L. HOM05D006539 ORTHO05D008694 5.9e-61 240.0 234 50.9
Hund15564 Selenicereus undatus HOM05D006539 ORTHO05D008694 1.0e-60 239.2 226 51.8
Migut.H00658 Erythranthe guttata HOM05D006539 ORTHO05D008694 1.3e-60 238.8 241 48.5
AT5G15390 Arabidopsis thaliana HOM05D006539 ORTHO05D008694 1.7e-60 238.4 280 45.4
BolC9t59012H Brassica oleracea HOM05D006539 ORTHO05D008694 1.7e-60 238.4 244 48.4
BraA10t44417Z Brassica rapa HOM05D006539 ORTHO05D008694 1.7e-60 238.4 250 47.6
Gohir.A11G071300 Gossypium hirsutum HOM05D006539 ORTHO05D008694 1.7e-60 238.4 240 49.6
Lju41A8T108 Lonicera japonica HOM05D006539 ORTHO05D008694 1.7e-60 238.4 240 47.9
Peaxi162Scf00166g00943 Petunia axillaris HOM05D006539 ORTHO05D008694 1.7e-60 238.4 225 51.6
Sp6g28700 Schrenkiella parvula HOM05D006539 ORTHO05D008694 2.9e-60 237.7 243 47.7
unitig_899.g15160 Utricularia gibba HOM05D006539 ORTHO05D008694 2.9e-60 237.7 240 48.8
SGA_v2.0_scaffold4G02416 Striga asiatica HOM05D006539 ORTHO05D008694 3.8e-60 237.3 240 48.3
Thhalv10013964m.g Eutrema salsugineum HOM05D006539 ORTHO05D008694 5.0e-60 236.9 243 47.3
Lsat_1_v5_gn_4_170180 Lactuca sativa HOM05D006539 ORTHO05D008694 5.0e-60 236.9 243 48.1
Thecc.04G090200 Theobroma cacao HOM05D006539 ORTHO05D008694 5.0e-60 236.9 241 49.0
CAN.G206.194 Capsicum annuum HOM05D006539 ORTHO05D008694 1.1e-59 235.7 229 51.1
SMO116G0014 Selaginella moellendorffii HOM05D006539 ORTHO05D008694 1.1e-59 235.7 241 51.5
PGSC0003DMG400001350 Solanum tuberosum HOM05D006539 ORTHO05D008694 1.1e-59 235.7 225 51.1
Aqoxy3G00450 Aquilegia oxysepala HOM05D006539 ORTHO05D008694 1.5e-59 235.3 227 51.5
HanXRQChr09g0264131 Helianthus annuus HOM05D006539 ORTHO05D008694 1.5e-59 235.3 239 49.0
Solyc02g088540.3 Solanum lycopersicum HOM05D006539 ORTHO05D008694 1.9e-59 235.0 225 51.1
Sopen02g033260 Solanum pennellii HOM05D006539 ORTHO05D008694 1.9e-59 235.0 225 51.1
Psat3g198480 Pisum sativum HOM05D006539 ORTHO05D008694 3.2e-59 234.2 265 47.2
arahy.Tifrunner.gnm1.ann1.54MYG6 Arachis hypogaea HOM05D006539 ORTHO05D008694 4.2e-59 233.8 264 46.2
Aa31LG11G14170 Aethionema arabicum HOM05D006539 ORTHO05D008694 2.7e-58 231.1 242 47.1
AL6G26250 Arabidopsis lyrata HOM05D006539 ORTHO05D008694 3.6e-58 230.7 292 41.8
QL02p039353 Quercus lobata HOM05D006539 ORTHO05D008694 8.0e-58 229.6 229 51.5
PSO478G0472 Papaver somniferum HOM05D006539 ORTHO05D008694 5.2e-57 226.9 242 48.3
QL02p039600 Quercus lobata HOM05D006539 ORTHO05D008694 2.0e-56 224.9 242 48.3
Haze_14476 Corylus avellana HOM05D003516 ORTHO05D004068 2.4e-54 218.0 241 46.5
HPP92_006554 Vanilla planifolia HOM05D006539 ORTHO05D008694 9.1e-54 216.1 203 54.2
AUR62034477 Chenopodium quinoa HOM05D006539 ORTHO05D008694 2.7e-53 214.5 328 37.2
FAN14G0848 Fragaria x ananassa HOM05D006539 ORTHO05D008694 3.5e-53 214.2 203 51.7
Cre03.g169700 Chlamydomonas reinhardtii HOM05D006539 ORTHO05D008694 8.0e-50 203.0 236 44.1
Nitab4.5_0008573g0030 Nicotiana tabacum HOM05D006539 ORTHO05D008694 1.8e-46 191.8 297 37.7
PRCOL_00002708 Prasinoderma coloniale HOM05D006539 ORTHO05D008694 3.2e-46 191.0 222 44.1
MELO3C009837.2 Cucumis melo HOM05D006539 ORTHO05D008694 1.3e-44 185.7 244 42.2
MCO16G092 Micromonas commoda HOM05D006539 ORTHO05D008694 6.2e-42 176.8 223 42.6
HPP92_013415 Vanilla planifolia HOM05D006539 ORTHO05D008694 8.9e-41 172.9 187 46.0
Pp3c3_25470 Physcomitrium patens HOM05D006539 ORTHO05D008694 1.7e-39 168.7 156 51.9
Ciclev10013894m.g Citrus clementina HOM05D006539 ORTHO05D008694 1.0e-36 159.5 156 50.6
arahy.Tifrunner.gnm1.ann1.B86ER2 Arachis hypogaea HOM05D006539 ORTHO05D009236 5.6e-35 153.7 201 44.3
CSS0042966 Camellia sinensis var. sinensis HOM05D006539 ORTHO05D008694 1.2e-32 146.0 132 53.0
CSS0047989 Camellia sinensis var. sinensis HOM05D006539 ORTHO05D008694 3.4e-32 144.4 132 53.0
AUR62044515 Chenopodium quinoa HOM05D006539 ORTHO05D008694 1.7e-31 142.1 117 54.7
FAN09G1445 Fragaria x ananassa HOM05D006539 ORTHO05D008694 1.1e-30 139.4 132 51.5
Dinv33805 Davidia involucrata HOM05D006539 ORTHO05D008694 2.4e-30 138.3 132 50.8
Nitab4.5_0003216g0020 Nicotiana tabacum HOM05D006539 ORTHO05D008694 4.0e-25 120.9 281 31.3
Ca_06844_v3 Cicer arietinum L. HOM05D006539 ORTHO05D008694 2.0e-24 118.6 121 47.9
FAN02G0136 Fragaria x ananassa HOM05D006539 ORTHO05D008694 8.4e-23 113.2 119 45.4
MD11G1144500 Malus domestica HOM05D006539 ORTHO05D008694 8.4e-15 86.7 80 48.8
Cre09.g392950 Chlamydomonas reinhardtii HOM05D006539 ORTHO05D044332 1.9e-14 85.5 212 28.8
HPP92_013416 Vanilla planifolia HOM05D006539 ORTHO05D008694 4.6e-13 80.9 87 51.7
MD07G1179900 Malus domestica HOM05D006539 ORTHO05D008694 2.3e-12 78.6 80 45.0
CSS0026858 Camellia sinensis var. sinensis HOM05D006539 ORTHO05D043354 1.6e-10 72.4 127 33.9
CSS0050509 Camellia sinensis var. sinensis HOM05D006539 ORTHO05D043354 2.4e-09 68.6 137 31.4
Ciclev10013255m.g Citrus clementina HOM05D006539 ORTHO05D008694 1.5e-08 65.9 66 48.5
MCO01G306 Micromonas commoda HOM05D003893 ORTHO05D005167 8.4e-07 60.1 176 30.1
MCO05G154 Micromonas commoda HOM05D006539 ORTHO05D044332 3.2e-06 58.2 265 24.2


User provided reference genes

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