Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CBR_g34767 Chara braunii HOM05D004162 ORTHO05D004543 0.0e+00 4538.0 2417 100.0
Pp3c18_21900 Physcomitrium patens HOM05D004162 ORTHO05D004543 2.2e-32 147.1 316 31.0
Nn4g24245 Nelumbo nucifera HOM05D004162 ORTHO05D004543 1.8e-31 144.1 315 30.2
Mapoly0002s0230 Marchantia polymorpha HOM05D004162 ORTHO05D004543 9.1e-31 141.7 295 31.2
Sed0019203 Sechium edule HOM05D004162 ORTHO05D004543 2.2e-29 137.1 293 29.4
CBR_g32246 Chara braunii HOM05D004162 ORTHO05D004543 1.1e-28 134.8 274 33.9
MBI08_g04930_MAGBIO Magnolia biondii HOM05D004162 ORTHO05D004543 2.5e-28 133.7 304 31.2
Nn3g21925 Nelumbo nucifera HOM05D004162 ORTHO05D004543 2.1e-27 130.6 309 29.1
ClCG04G010610 Citrullus lanatus HOM05D004162 ORTHO05D004543 2.7e-27 130.2 293 28.0
MBI07_g11051_MAGBIO Magnolia biondii HOM05D004162 ORTHO05D004543 1.8e-26 127.5 308 29.9
SMO358G0036 Selaginella moellendorffii HOM05D002930 ORTHO05D003283 2.3e-26 127.1 295 33.6
TAR371G1103 Trochodendron aralioides HOM05D004162 ORTHO05D004543 3.9e-26 126.3 307 28.0
Aqoxy7G03636 Aquilegia oxysepala HOM05D000527 ORTHO05D004543 2.0e-25 124.0 296 29.4
Aqoxy6G00116 Aquilegia oxysepala HOM05D004162 ORTHO05D004543 3.3e-25 123.2 297 30.0
Cfa019653 Carpinus fangiana HOM05D004162 ORTHO05D004543 3.3e-25 123.2 300 29.7
CANSAT54G2092 Cannabis sativa HOM05D004162 ORTHO05D004543 4.4e-25 122.9 294 29.3
Lj5C158G4 Lonicera japonica HOM05D004162 ORTHO05D004543 4.4e-25 122.9 298 29.5
ATR0594G087 Amborella trichopoda HOM05D004162 ORTHO05D004543 5.7e-25 122.5 297 30.6
AagrBONN_evm.TU.Sc2ySwM_228.478 Anthoceros agrestis HOM05D004162 ORTHO05D004543 5.7e-25 122.5 280 29.3
CsaV3_1G007180 Cucumis sativus L. HOM05D004162 ORTHO05D004543 7.4e-25 122.1 314 27.4
CiPaw.15G143600 Carya illinoinensis HOM05D004162 ORTHO05D004543 9.7e-25 121.7 294 28.2
Haze_18859 Corylus avellana HOM05D004162 ORTHO05D004543 1.3e-24 121.3 303 29.7
GSVIVG01008445001 Vitis vinifera HOM05D004162 ORTHO05D004543 2.2e-24 120.6 318 28.6
CSS0046385 Camellia sinensis var. sinensis HOM05D004162 ORTHO05D004543 8.2e-24 118.6 307 28.0
Cc04_g06230 Coffea canephora HOM05D004162 ORTHO05D004543 8.2e-24 118.6 330 28.5
Atru.chr9.1709 Acer truncatum HOM05D004162 ORTHO05D004543 1.1e-23 118.2 300 28.0
Atru.chr9.1725 Acer truncatum HOM05D004162 ORTHO05D004543 1.8e-23 117.5 309 28.2
TWI81G0681 Tripterygium wilfordii HOM05D004162 ORTHO05D004543 5.3e-23 115.9 296 25.3
ECA238G4801 Erigeron canadensis HOM05D004162 ORTHO05D004543 9.1e-23 115.2 306 27.1
Dinv27223 Davidia involucrata HOM05D004162 ORTHO05D004543 1.2e-22 114.8 284 28.2
PGR083G0911 Punica granatum HOM05D004162 ORTHO05D004543 1.2e-22 114.8 272 27.6
Actinidia07535 Actinidia chinensis HOM05D004162 ORTHO05D004543 4.5e-22 112.8 264 28.8
MSTRG.9305 Avicennia marina HOM05D004162 ORTHO05D004543 7.7e-22 112.1 297 29.6
Ciclev10008209m.g Citrus clementina HOM05D004162 ORTHO05D004543 7.7e-22 112.1 299 24.7
CANSAT80G1525 Cannabis sativa HOM05D004162 ORTHO05D004543 1.0e-21 111.7 292 26.7
Rhsim02G0000200 Rhododendron simsii HOM05D004162 ORTHO05D004543 1.0e-21 111.7 300 26.7
PGSC0003DMG400021171 Solanum tuberosum HOM05D004162 ORTHO05D004543 5.0e-21 109.4 303 27.1
FAN05G0184 Fragaria x ananassa HOM05D004162 ORTHO05D004543 1.1e-20 108.2 302 28.8
RcHm_v2.0_Chr7g0178331 Rosa chinensis HOM05D004162 ORTHO05D004543 1.5e-20 107.8 302 29.8
Duzib205G1017 Durio zibethinus HOM05D004162 ORTHO05D004543 2.5e-20 107.1 305 26.9
Solyc02g070300.4 Solanum lycopersicum HOM05D004162 ORTHO05D004543 3.2e-20 106.7 296 26.4
arahy.Tifrunner.gnm1.ann1.7MCX13 Arachis hypogaea HOM05D004162 ORTHO05D004543 7.2e-20 105.5 269 27.9
arahy.Tifrunner.gnm1.ann1.681ID1 Arachis hypogaea HOM05D004162 ORTHO05D004543 9.4e-20 105.1 268 27.6
Sopen02g019390 Solanum pennellii HOM05D004162 ORTHO05D004543 9.4e-20 105.1 296 26.4
FvH4_6g53500 Fragaria vesca HOM05D004162 ORTHO05D004543 1.6e-19 104.4 302 27.8
FAN14G2905 Fragaria x ananassa HOM05D004162 ORTHO05D004543 1.6e-19 104.4 302 27.8
CAN.G660.38 Capsicum annuum HOM05D004162 ORTHO05D004543 4.7e-19 102.8 335 25.4
Ah.04g164220 Amaranthus hybridus HOM05D004162 ORTHO05D004543 6.1e-19 102.4 293 25.9
Hma1.2p1_3150F.1_g333200 Hydrangea macrophylla HOM05D004162 ORTHO05D004543 6.1e-19 102.4 307 27.0
Lalb_Chr05g0221631 Lupinus albus HOM05D004162 ORTHO05D004543 8.0e-19 102.1 294 26.5
arahy.Tifrunner.gnm1.ann1.B7AHJA Arachis hypogaea HOM05D004162 ORTHO05D004543 1.4e-18 101.3 268 27.2
Manes.06G005900 Manihot esculenta HOM05D004162 ORTHO05D004543 1.8e-18 100.9 278 26.3
THA.LOC104812555 Tarenaya hassleriana HOM05D004162 ORTHO05D004543 2.3e-18 100.5 300 26.7
Gohir.D12G193100 Gossypium hirsutum HOM05D004162 ORTHO05D004543 4.0e-18 99.8 294 25.9
Gorai.008G207900 Gossypium raimondii HOM05D004162 ORTHO05D004543 4.0e-18 99.8 294 25.9
EL10Ac4g08358 Beta vulgaris HOM05D004162 ORTHO05D004543 5.2e-18 99.4 343 27.4
Migut.D01539 Erythranthe guttata HOM05D004162 ORTHO05D004543 2.6e-17 97.1 299 26.1
TWI75G0727 Tripterygium wilfordii HOM05D004162 ORTHO05D004543 3.3e-17 96.7 296 26.4
Eucgr.B00998 Eucalyptus grandis HOM05D004162 ORTHO05D004543 4.4e-17 96.3 294 25.9
TAR636G2328 Trochodendron aralioides HOM05D004162 ORTHO05D004543 4.4e-17 96.3 212 30.2
Nitab4.5_0001756g0030 Nicotiana tabacum HOM05D004162 ORTHO05D004543 5.7e-17 95.9 309 26.9
SalBow3G1690 Salvia bowleyana HOM05D004162 ORTHO05D004543 5.7e-17 95.9 295 25.4
SalBow3G1953 Salvia bowleyana HOM05D004162 ORTHO05D004543 5.7e-17 95.9 295 25.4
MD06G1227400 Malus domestica HOM05D004162 ORTHO05D004543 7.5e-17 95.5 300 27.3
Pp3c12_3560 Physcomitrium patens HOM05D006182 ORTHO05D007236 9.7e-17 95.1 359 25.6
Oeu046631.1 Olea europaea HOM05D004162 ORTHO05D004543 1.7e-16 94.4 306 25.5
Dinv08781 Davidia involucrata HOM05D004162 ORTHO05D004543 2.2e-16 94.0 270 27.4
AT2G05210 Arabidopsis thaliana HOM05D004162 ORTHO05D004543 6.3e-16 92.4 310 25.8
FAN09G1804 Fragaria x ananassa HOM05D004162 ORTHO05D004543 8.2e-16 92.0 307 26.7
Lsat_1_v5_gn_2_63961 Lactuca sativa HOM05D004162 ORTHO05D004543 8.2e-16 92.0 303 25.4
FAN02G2531 Fragaria x ananassa HOM05D004162 ORTHO05D004543 1.1e-15 91.7 300 27.3
Glyma.05G246600 Glycine max HOM05D004162 ORTHO05D004543 1.4e-15 91.3 293 23.5
Peaxi162Scf00050g02313 Petunia axillaris HOM05D004162 ORTHO05D004543 1.8e-15 90.9 308 26.3
Nitab4.5_0000869g0150 Nicotiana tabacum HOM05D004162 ORTHO05D004543 3.1e-15 90.1 311 25.1
Ciclev10005180m.g Citrus clementina HOM05D004162 ORTHO05D004543 4.1e-15 89.7 218 29.4
MELO3C002134.2 Cucumis melo HOM05D004162 ORTHO05D004543 5.3e-15 89.4 300 24.3
FAN02G1371 Fragaria x ananassa HOM05D004162 ORTHO05D004543 7.0e-15 89.0 282 27.3
Gohir.A07G073600 Gossypium hirsutum HOM05D004162 ORTHO05D004543 9.1e-15 88.6 294 24.5
MD13G1006200 Malus domestica HOM05D004162 ORTHO05D004543 9.1e-15 88.6 299 25.1
Haze_09240 Corylus avellana HOM05D004162 ORTHO05D004543 1.2e-14 88.2 263 26.2
CANSAT78G2305 Cannabis sativa HOM05D004162 ORTHO05D004543 2.0e-14 87.4 291 24.4
CARHR103050 Cardamine hirsuta HOM05D004162 ORTHO05D004543 2.0e-14 87.4 310 26.5
Cfa011869 Carpinus fangiana HOM05D004162 ORTHO05D004543 2.0e-14 87.4 263 26.2
Gorai.001G082700 Gossypium raimondii HOM05D004162 ORTHO05D004543 2.7e-14 87.0 293 24.2
HanXRQChr14g0447361 Helianthus annuus HOM05D004162 ORTHO05D004543 2.7e-14 87.0 298 25.2
Carub.0006s0520 Capsella rubella HOM05D004162 ORTHO05D004543 3.5e-14 86.7 271 26.2
Gohir.D07G078300 Gossypium hirsutum HOM05D004162 ORTHO05D004543 3.5e-14 86.7 293 24.2
Psat4g000200 Pisum sativum HOM05D004162 ORTHO05D004543 5.9e-14 85.9 319 23.5
Glyma.08G054800 Glycine max HOM05D004162 ORTHO05D004543 1.0e-13 85.1 275 26.5
PSO210G3845 Papaver somniferum HOM05D004162 ORTHO05D004543 1.7e-13 84.3 389 23.9
AL3G42790 Arabidopsis lyrata HOM05D004162 ORTHO05D004543 1.9e-12 80.9 310 24.2
QL10p029785 Quercus lobata HOM05D004162 ORTHO05D004543 7.2e-12 79.0 380 22.6
Atru.chr1.59 Acer truncatum HOM05D004162 ORTHO05D004543 4.7e-11 76.3 303 25.1
ATR0225G007 Amborella trichopoda HOM05D006182 ORTHO05D007236 8.0e-11 75.5 365 23.8
Phvul.011G175100 Phaseolus vulgaris HOM05D006182 ORTHO05D007236 2.3e-10 73.9 175 32.0
SEGI_33776 Sequoiadendron giganteum HOM05D004162 ORTHO05D004543 1.2e-09 71.6 138 28.3
Lj4g0021249 Lotus japonicus HOM05D002609 ORTHO05D002820 3.4e-09 70.1 241 25.7
arahy.Tifrunner.gnm1.ann1.I266YZ Arachis hypogaea HOM05D006182 ORTHO05D007236 1.3e-08 68.2 177 30.5
arahy.Tifrunner.gnm1.ann1.903WAW Arachis hypogaea HOM05D006182 ORTHO05D007236 1.7e-08 67.8 177 31.1
COL.COLO4_05717 Corchorus olitorius HOM05D004162 ORTHO05D004543 1.7e-08 67.8 222 24.3
vmacro21568 Vaccinium macrocarpon HOM05D006182 ORTHO05D007236 2.2e-08 67.4 361 24.7
Nitab4.5_0005963g0070 Nicotiana tabacum HOM05D004162 ORTHO05D004543 4.8e-08 66.2 304 22.7
Hund17739 Selenicereus undatus HOM05D004162 ORTHO05D004543 4.8e-08 66.2 136 32.4
vmacro09753 Vaccinium macrocarpon HOM05D004162 ORTHO05D004543 1.1e-07 65.1 156 26.9
Nn6g32369 Nelumbo nucifera HOM05D006182 ORTHO05D007236 4.1e-07 63.2 173 31.8
ATR1149G147 Amborella trichopoda HOM05D004162 ORTHO05D004543 9.1e-07 62.0 131 35.1
Thecc.08G014800 Theobroma cacao HOM05D006182 ORTHO05D007236 9.1e-07 62.0 180 30.6
Hma1.2p1_0951F.1_g240770 Hydrangea macrophylla HOM05D006182 ORTHO05D007236 2.7e-06 60.5 182 31.3
Gohir.A05G016750 Gossypium hirsutum HOM05D006182 ORTHO05D007236 3.5e-06 60.1 178 28.7
MSTRG.25113 Avicennia marina HOM05D006182 ORTHO05D007236 4.5e-06 59.7 147 33.3


User provided reference genes

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