Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CBR_g32247 Chara braunii HOM05D006135 ORTHO05D007533 8.6e-180 633.6 343 100.0
Pp3c10_170 Physcomitrium patens HOM05D006135 ORTHO05D007533 1.4e-86 323.9 341 53.1
SMO115G0347 Selaginella moellendorffii HOM05D006135 ORTHO05D007533 2.1e-85 320.1 345 50.7
FAN22G2161 Fragaria x ananassa HOM05D006135 ORTHO05D007533 5.2e-84 315.5 343 52.5
FAN17G2903 Fragaria x ananassa HOM05D006135 ORTHO05D007533 1.1e-83 314.3 343 52.2
RcHm_v2.0_Chr4g0438561 Rosa chinensis HOM05D006135 ORTHO05D007533 1.5e-83 313.9 343 51.3
FAN12G3645 Fragaria x ananassa HOM05D006135 ORTHO05D007533 2.0e-83 313.5 343 51.3
FAN07G2159 Fragaria x ananassa HOM05D006135 ORTHO05D007533 3.3e-83 312.8 343 51.9
MD16G1062500 Malus domestica HOM05D006135 ORTHO05D007533 3.3e-83 312.8 339 52.2
CSS0045883 Camellia sinensis var. sinensis HOM05D006135 ORTHO05D007533 4.4e-83 312.4 339 51.3
FvH4_4g30260 Fragaria vesca HOM05D006135 ORTHO05D007533 9.7e-83 311.2 343 51.0
Gohir.A03G103900 Gossypium hirsutum HOM05D006135 ORTHO05D007533 1.3e-82 310.8 342 50.0
Sed0023480 Sechium edule HOM05D006135 ORTHO05D007533 1.7e-82 310.5 340 51.5
Duzib268G0538 Durio zibethinus HOM05D006135 ORTHO05D007533 2.8e-82 309.7 342 50.3
Gohir.D02G129100 Gossypium hirsutum HOM05D006135 ORTHO05D007533 2.8e-82 309.7 343 49.9
Gorai.005G144800 Gossypium raimondii HOM05D006135 ORTHO05D007533 2.8e-82 309.7 343 49.9
MELO3C011427.2 Cucumis melo HOM05D006135 ORTHO05D007533 8.2e-82 308.1 339 51.0
Eucgr.G02457 Eucalyptus grandis HOM05D006135 ORTHO05D007533 8.2e-82 308.1 339 51.3
Zm00001eb298610 Zea mays HOM05D006135 ORTHO05D007533 1.1e-81 307.8 339 50.7
COL.COLO4_27903 Corchorus olitorius HOM05D006135 ORTHO05D007533 1.4e-81 307.4 339 50.4
PGR119G0479 Punica granatum HOM05D006135 ORTHO05D007533 1.8e-81 307.0 339 51.0
CsaV3_6G032530 Cucumis sativus L. HOM05D006135 ORTHO05D007533 2.4e-81 306.6 339 50.7
CsaV3_6G033610 Cucumis sativus L. HOM05D006135 ORTHO05D007533 2.4e-81 306.6 339 50.7
Cpa.g.sc1.112 Carica papaya HOM05D006135 ORTHO05D007533 3.1e-81 306.2 339 51.0
QL03p071327 Quercus lobata HOM05D006135 ORTHO05D007533 4.1e-81 305.8 340 51.2
Lalb_Chr10g0096961 Lupinus albus HOM05D006135 ORTHO05D007533 1.6e-80 303.9 341 50.7
Prupe.1G285000 Prunus persica HOM05D006135 ORTHO05D007533 1.6e-80 303.9 340 50.6
SGA_v2.0_scaffold308G48068 Striga asiatica HOM05D006135 ORTHO05D007533 1.6e-80 303.9 339 50.1
Thecc.02G333100 Theobroma cacao HOM05D006135 ORTHO05D007533 1.6e-80 303.9 339 49.6
unitig_22.g6497 Utricularia gibba HOM05D006135 ORTHO05D007533 1.6e-80 303.9 339 49.3
THA.LOC104824063 Tarenaya hassleriana HOM05D006135 ORTHO05D007533 2.0e-80 303.5 339 49.9
Atru.chr11.1655 Acer truncatum HOM05D006135 ORTHO05D007533 3.5e-80 302.8 339 49.6
Ciclev10032231m.g Citrus clementina HOM05D006135 ORTHO05D007533 3.5e-80 302.8 341 50.7
Hma1.2p1_0357F.1_g134610 Hydrangea macrophylla HOM05D006135 ORTHO05D007533 3.5e-80 302.8 340 50.3
PSO170G2502 Papaver somniferum HOM05D006135 ORTHO05D007533 3.5e-80 302.8 343 49.0
Phvul.010G098900 Phaseolus vulgaris HOM05D006135 ORTHO05D007533 3.5e-80 302.8 339 49.9
Phvul.011G076500 Phaseolus vulgaris HOM05D006135 ORTHO05D007533 3.5e-80 302.8 339 49.9
MSTRG.745 Avicennia marina HOM05D006135 ORTHO05D007533 4.5e-80 302.4 339 49.3
Medtr8g030830 Medicago truncatula HOM05D006135 ORTHO05D007533 4.5e-80 302.4 339 49.0
Sc04g0007660 Simmondsia chinensis HOM05D006135 ORTHO05D007533 4.5e-80 302.4 339 49.9
EL10Ac6g14988 Beta vulgaris HOM05D006135 ORTHO05D007533 7.7e-80 301.6 339 49.6
AUR62013291 Chenopodium quinoa HOM05D006135 ORTHO05D007533 1.0e-79 301.2 339 48.1
VMungo0331G1135 Vigna mungo HOM05D006135 ORTHO05D007533 1.0e-79 301.2 339 49.6
AUR62007931 Chenopodium quinoa HOM05D006135 ORTHO05D007533 1.3e-79 300.8 339 48.4
Peaxi162Scf00155g00910 Petunia axillaris HOM05D006135 ORTHO05D007533 1.3e-79 300.8 342 49.7
Aa31LG2G7130 Aethionema arabicum HOM05D006135 ORTHO05D007533 1.7e-79 300.4 338 50.0
Lj6P780T42 Lonicera japonica HOM05D006135 ORTHO05D007533 1.7e-79 300.4 339 49.9
CiPaw.06G091600 Carya illinoinensis HOM05D006135 ORTHO05D007533 2.2e-79 300.1 339 49.6
Migut.L01201 Erythranthe guttata HOM05D006135 ORTHO05D007533 2.2e-79 300.1 339 50.1
Rhsim08G0202600 Rhododendron simsii HOM05D006135 ORTHO05D007533 2.2e-79 300.1 339 50.1
Medtr8g446960 Medicago truncatula HOM05D006135 ORTHO05D007533 2.9e-79 299.7 339 48.4
SalBow2G2095 Salvia bowleyana HOM05D006135 ORTHO05D007533 2.9e-79 299.7 339 51.0
Manes.07G067750 Manihot esculenta HOM05D006135 ORTHO05D007533 5.0e-79 298.9 340 48.8
Manes.07G067800 Manihot esculenta HOM05D006135 ORTHO05D007533 5.0e-79 298.9 340 48.8
Lj3g0000255 Lotus japonicus HOM05D006135 ORTHO05D007533 6.5e-79 298.5 339 49.0
Oeu004576.4 Olea europaea HOM05D006135 ORTHO05D007533 8.5e-79 298.1 339 48.1
TPR.G19440 Trifolium pratense HOM05D006135 ORTHO05D007533 8.5e-79 298.1 339 47.8
ECA246G3492 Erigeron canadensis HOM05D006135 ORTHO05D007533 1.5e-78 297.4 340 50.6
Glyma.07G070800 Glycine max HOM05D006135 ORTHO05D007533 3.2e-78 296.2 339 48.7
Potri.008G094600 Populus trichocarpa HOM05D006135 ORTHO05D007533 3.2e-78 296.2 339 48.4
SGA_v2.0_scaffold36G14447 Striga asiatica HOM05D006135 ORTHO05D007533 5.5e-78 295.4 339 49.6
Sabra10G0121200 Salix brachista HOM05D006135 ORTHO05D007533 1.2e-77 294.3 339 48.1
Psat4g154880 Pisum sativum HOM05D006135 ORTHO05D007533 1.6e-77 293.9 339 49.0
Lsat_1_v5_gn_3_56041 Lactuca sativa HOM05D006135 ORTHO05D007533 2.7e-77 293.1 338 49.7
Sopen08g004100 Solanum pennellii HOM05D006135 ORTHO05D007533 4.7e-77 292.4 339 49.6
PGSC0003DMG400005786 Solanum tuberosum HOM05D006135 ORTHO05D007533 6.1e-77 292.0 339 49.3
PSO017G0525 Papaver somniferum HOM05D006135 ORTHO05D007533 8.0e-77 291.6 343 48.7
TAR622G1353 Trochodendron aralioides HOM05D006135 ORTHO05D007533 1.8e-76 290.4 339 48.7
CANSAT64G3010 Cannabis sativa HOM05D006135 ORTHO05D007533 2.3e-76 290.0 341 51.0
SalBow6G2218 Salvia bowleyana HOM05D006135 ORTHO05D007533 3.0e-76 289.7 331 49.5
CAN.G792.64 Capsicum annuum HOM05D006135 ORTHO05D007533 6.8e-76 288.5 339 49.0
Cc11_g12150 Coffea canephora HOM05D006135 ORTHO05D007533 8.8e-76 288.1 339 47.8
Carub.0001s1357 Capsella rubella HOM05D006135 ORTHO05D007533 1.5e-75 287.3 338 48.5
CANSAT64G1447 Cannabis sativa HOM05D006135 ORTHO05D007533 2.6e-75 286.6 342 51.2
Aa31LG1G1130 Aethionema arabicum HOM05D006135 ORTHO05D007533 3.4e-75 286.2 342 50.3
AL1G25700 Arabidopsis lyrata HOM05D006135 ORTHO05D007533 3.4e-75 286.2 338 48.2
MBI03_g07691_MAGBIO Magnolia biondii HOM05D006135 ORTHO05D007533 3.4e-75 286.2 351 49.3
Dinv34082 Davidia involucrata HOM05D006135 ORTHO05D008017 4.4e-75 285.8 333 49.2
BraA08t35146Z Brassica rapa HOM05D006135 ORTHO05D007533 2.8e-74 283.1 338 49.1
CARHR014240 Cardamine hirsuta HOM05D006135 ORTHO05D007533 2.8e-74 283.1 338 48.2
HanXRQChr12g0375331 Helianthus annuus HOM05D006135 ORTHO05D007533 3.7e-74 282.7 341 48.4
Sp1g12090 Schrenkiella parvula HOM05D006135 ORTHO05D007533 4.8e-74 282.3 338 47.3
BcaC07g38705 Brassica carinata HOM05D006135 ORTHO05D007533 6.3e-74 282.0 338 48.8
C08p16350 Brassica napus HOM05D006135 ORTHO05D007533 6.3e-74 282.0 338 48.8
C08p46210 Brassica napus HOM05D006135 ORTHO05D007533 6.3e-74 282.0 338 47.6
BolC8t49259H Brassica oleracea HOM05D006135 ORTHO05D007533 6.3e-74 282.0 338 48.8
BolC8t52170H Brassica oleracea HOM05D006135 ORTHO05D007533 6.3e-74 282.0 338 47.6
BcaC07g41617 Brassica carinata HOM05D006135 ORTHO05D007533 8.3e-74 281.6 338 47.3
AT1G13870 Arabidopsis thaliana HOM05D006135 ORTHO05D007533 1.1e-73 281.2 338 47.6
Ah.04g155380 Amaranthus hybridus HOM05D001254 ORTHO05D007533 1.8e-73 280.4 327 47.7
A09p62650 Brassica napus HOM05D006135 ORTHO05D007533 2.4e-73 280.0 338 47.3
A08p32230 Brassica napus HOM05D006135 ORTHO05D007533 3.1e-73 279.6 338 49.4
BcaB08g34333 Brassica carinata HOM05D006135 ORTHO05D007533 4.1e-73 279.3 338 47.0
Mapoly0008s0061 Marchantia polymorpha HOM05D006135 ORTHO05D007533 9.1e-73 278.1 321 50.2
BcaB03g13127 Brassica carinata HOM05D006135 ORTHO05D007533 1.6e-72 277.3 338 47.6
SHI21260 Sapria himalayana HOM05D006135 ORTHO05D007533 1.6e-72 277.3 340 47.4
BraA09t41629Z Brassica rapa HOM05D006135 ORTHO05D007533 2.0e-72 276.9 338 47.3
HPP92_017746 Vanilla planifolia HOM05D006135 ORTHO05D007533 3.5e-72 276.2 339 47.5
TAR374G0384 Trochodendron aralioides HOM05D006135 ORTHO05D007533 2.9e-71 273.1 341 47.2
Solyc08g008250.3 Solanum lycopersicum HOM05D006135 ORTHO05D007533 8.3e-66 255.0 277 50.9
Sabra08G0071100 Salix brachista HOM05D006135 ORTHO05D007533 1.1e-65 254.6 315 47.0
ATR1136G145 Amborella trichopoda HOM05D006135 ORTHO05D007533 2.9e-63 246.5 291 49.5
HanXRQChr13g0417131 Helianthus annuus HOM05D006135 ORTHO05D007533 3.8e-63 246.1 276 50.4
Nitab4.5_0000607g0040 Nicotiana tabacum HOM05D006135 ORTHO05D007533 8.9e-60 235.0 289 46.4
Cre17.g711050 Chlamydomonas reinhardtii HOM05D006135 ORTHO05D007533 2.6e-59 233.4 353 42.2
ClCG08G010310 Citrullus lanatus HOM05D006135 ORTHO05D008017 1.3e-58 231.1 253 49.4
Aqoxy6G00083 Aquilegia oxysepala HOM05D006135 ORTHO05D007533 1.7e-58 230.7 254 50.8
CDE04G1019 Ceratophyllum demersum HOM05D006135 ORTHO05D007533 3.7e-58 229.6 294 46.6
Nitab4.5_0000100g0120 Nicotiana tabacum HOM05D006135 ORTHO05D007533 3.7e-58 229.6 255 49.4
SalBow2G1772 Salvia bowleyana HOM05D006135 ORTHO05D007533 3.5e-56 223.0 246 51.6
SalBow6G7020 Salvia bowleyana HOM05D006135 ORTHO05D007533 5.9e-56 222.2 250 50.0
Duzib251G0397 Durio zibethinus HOM05D006135 ORTHO05D007533 1.7e-55 220.7 263 47.1
Haze_11974 Corylus avellana HOM05D006135 ORTHO05D007533 8.0e-53 211.8 240 49.2
Pp3c8_25320 Physcomitrium patens HOM05D006135 ORTHO05D007533 1.4e-41 174.5 171 53.2
Nn3g17430 Nelumbo nucifera HOM05D006135 ORTHO05D007533 1.0e-39 168.3 343 35.3
MCO02G221 Micromonas commoda HOM05D006135 ORTHO05D007533 3.9e-39 166.4 189 51.3
PRCOL_00001916 Prasinoderma coloniale HOM05D006135 ORTHO05D007533 1.8e-36 157.5 377 35.0
vmacro19077 Vaccinium macrocarpon HOM05D006135 ORTHO05D007533 5.2e-36 156.0 203 44.3
SEGI_02005 Sequoiadendron giganteum HOM05D006135 ORTHO05D007533 3.5e-32 143.3 123 61.0
Oeu025274.1 Olea europaea HOM05D006135 ORTHO05D007533 1.2e-24 118.2 114 55.3
Cfa026301 Carpinus fangiana HOM05D006135 ORTHO05D007533 1.5e-22 111.3 328 31.4
AagrBONN_evm.TU.Sc2ySwM_362.1915 Anthoceros agrestis HOM05D006135 ORTHO05D007533 2.1e-21 107.5 73 69.9
GSVIVG01012190001 Vitis vinifera HOM05D001577 ORTHO05D008017 2.0e-19 100.9 91 56.0
DCAR_030035 Daucus carota HOM05D006135 ORTHO05D007533 4.9e-18 96.3 93 53.8
Lsat_1_v5_gn_2_78301 Lactuca sativa HOM05D006135 ORTHO05D007533 4.9e-18 96.3 94 58.5
Os11g0312340 Oryza sativa ssp. japonica HOM05D006135 ORTHO05D007533 6.4e-18 95.9 97 53.6
HPP92_017676 Vanilla planifolia HOM05D006135 ORTHO05D007533 3.6e-13 80.1 127 40.9
Dinv16720 Davidia involucrata HOM05D006135 ORTHO05D007533 3.8e-10 70.1 89 39.3
Glyma.03G009300 Glycine max HOM05D006135 ORTHO05D007533 7.9e-08 62.4 42 69.0
Lalb_Chr17g0339631 Lupinus albus HOM05D006135 ORTHO05D007533 2.3e-07 60.8 74 48.6
SEGI_31918 Sequoiadendron giganteum HOM05D006135 ORTHO05D007533 7.4e-06 55.8 75 37.3


User provided reference genes

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