Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CBR_g32054 Chara braunii HOM05D005601 ORTHO05D007265 9.2e-267 922.9 447 100.0
Mapoly0008s0010 Marchantia polymorpha HOM05D005601 ORTHO05D007265 5.1e-124 448.7 454 49.8
SMO196G0059 Selaginella moellendorffii HOM05D005601 ORTHO05D007265 1.8e-121 440.3 436 49.8
SMO137G0068 Selaginella moellendorffii HOM05D005601 ORTHO05D007265 1.3e-116 424.1 432 45.6
Pp3c5_22590 Physcomitrium patens HOM05D005601 ORTHO05D007265 4.3e-115 419.1 494 44.3
AagrBONN_evm.TU.Sc2ySwM_117.1218 Anthoceros agrestis HOM05D005601 ORTHO05D007265 9.6e-115 417.9 420 50.5
GSVIVG01020400001 Vitis vinifera HOM05D005601 ORTHO05D007265 2.1e-106 390.2 427 44.0
Dinv42472 Davidia involucrata HOM05D005601 ORTHO05D007265 2.8e-106 389.8 427 45.7
CANSAT56G2459 Cannabis sativa HOM05D005601 ORTHO05D007265 4.8e-106 389.0 428 44.2
Nitab4.5_0006109g0020 Nicotiana tabacum HOM05D005601 ORTHO05D007265 4.0e-105 386.0 427 45.4
CSS0009872 Camellia sinensis var. sinensis HOM05D005601 ORTHO05D007265 6.9e-105 385.2 427 44.5
CSS0045419 Camellia sinensis var. sinensis HOM05D005601 ORTHO05D007265 6.9e-105 385.2 427 44.5
Nitab4.5_0000029g0250 Nicotiana tabacum HOM05D005601 ORTHO05D007265 2.0e-104 383.6 427 45.0
CsaV3_7G022950 Cucumis sativus L. HOM05D005601 ORTHO05D007265 3.4e-104 382.9 427 43.3
Potri.008G084100 Populus trichocarpa HOM05D005601 ORTHO05D007265 1.0e-103 381.3 427 44.5
Potri.010G172300 Populus trichocarpa HOM05D005601 ORTHO05D007265 1.3e-103 380.9 427 42.6
MELO3C012601.2 Cucumis melo HOM05D005601 ORTHO05D007265 3.8e-103 379.4 427 42.9
CAN.G943.56 Capsicum annuum HOM05D005601 ORTHO05D007265 6.5e-103 378.6 427 43.1
Sopen07g034790 Solanum pennellii HOM05D005601 ORTHO05D007265 6.5e-103 378.6 427 44.5
Peaxi162Scf00452g00334 Petunia axillaris HOM05D005601 ORTHO05D007265 8.4e-103 378.3 427 43.6
FvH4_3g14650 Fragaria vesca HOM05D005601 ORTHO05D007265 1.1e-102 377.9 438 43.6
QL04p090699 Quercus lobata HOM05D005601 ORTHO05D007265 1.1e-102 377.9 427 45.4
QL09p016707 Quercus lobata HOM05D005601 ORTHO05D007265 5.5e-102 375.6 427 45.2
RcHm_v2.0_Chr5g0024141 Rosa chinensis HOM05D005601 ORTHO05D007265 5.5e-102 375.6 428 44.9
Solyc07g066640.3 Solanum lycopersicum HOM05D005601 ORTHO05D007265 5.5e-102 375.6 427 44.3
PGSC0003DMG400022116 Solanum tuberosum HOM05D005601 ORTHO05D007265 5.5e-102 375.6 428 44.4
CiPaw.11G059700 Carya illinoinensis HOM05D005601 ORTHO05D007265 9.3e-102 374.8 427 42.6
ClCG09G022740 Citrullus lanatus HOM05D005601 ORTHO05D007265 1.2e-101 374.4 433 41.8
PSO675G6728 Papaver somniferum HOM05D005601 ORTHO05D007265 1.6e-101 374.0 436 41.1
Manes.14G007400 Manihot esculenta HOM05D005601 ORTHO05D007265 2.1e-101 373.6 427 42.2
Sc09g0007790 Simmondsia chinensis HOM05D005601 ORTHO05D007265 2.7e-101 373.2 430 43.3
MD05G1234300 Malus domestica HOM05D005601 ORTHO05D007265 3.5e-101 372.9 427 44.0
FAN11G1412 Fragaria x ananassa HOM05D005601 ORTHO05D007265 1.8e-100 370.5 447 43.6
Sed0023216 Sechium edule HOM05D005601 ORTHO05D007265 1.8e-100 370.5 427 42.6
Eucgr.F04464 Eucalyptus grandis HOM05D005601 ORTHO05D007265 2.5e-99 366.7 430 42.6
Aqoxy1G01411 Aquilegia oxysepala HOM05D005601 ORTHO05D007265 3.3e-99 366.3 446 42.6
Nn7g38204 Nelumbo nucifera HOM05D005601 ORTHO05D007265 3.3e-99 366.3 427 43.1
Migut.M01519 Erythranthe guttata HOM05D005601 ORTHO05D007265 4.3e-99 365.9 427 42.9
Sp1g14480 Schrenkiella parvula HOM05D005601 ORTHO05D007583 1.6e-98 364.0 426 41.3
TAR627G0482 Trochodendron aralioides HOM05D005601 ORTHO05D007265 1.6e-98 364.0 390 46.4
Ciclev10006846m.g Citrus clementina HOM05D005601 ORTHO05D007265 2.2e-98 363.6 427 41.9
MSTRG.7080 Avicennia marina HOM05D005601 ORTHO05D007265 2.8e-98 363.2 446 43.3
BcaC05g25587 Brassica carinata HOM05D005601 ORTHO05D007265 2.8e-98 363.2 427 41.5
C05p14450 Brassica napus HOM05D005601 ORTHO05D007265 2.8e-98 363.2 427 41.5
BcaB02g06608 Brassica carinata HOM05D005601 ORTHO05D007265 4.8e-98 362.5 427 41.5
MD10G1210800 Malus domestica HOM05D005601 ORTHO05D007265 4.8e-98 362.5 446 41.3
BolC5t30171H Brassica oleracea HOM05D005601 ORTHO05D007265 6.3e-98 362.1 427 41.5
A06p12210 Brassica napus HOM05D005601 ORTHO05D007265 1.1e-97 361.3 427 41.5
BraA06t24389Z Brassica rapa HOM05D005601 ORTHO05D007265 1.1e-97 361.3 427 41.5
AL1G28410 Arabidopsis lyrata HOM05D005601 ORTHO05D007265 1.4e-97 360.9 426 40.8
Lj2A13G19 Lonicera japonica HOM05D005601 ORTHO05D007265 1.4e-97 360.9 427 43.6
Carub.0001s1603 Capsella rubella HOM05D005601 ORTHO05D007265 1.8e-97 360.5 426 41.1
Prupe.4G131800 Prunus persica HOM05D005601 ORTHO05D007265 2.4e-97 360.1 435 42.3
CARHR016760 Cardamine hirsuta HOM05D005601 ORTHO05D007265 3.1e-97 359.8 426 40.6
vmacro11692 Vaccinium macrocarpon HOM05D005601 ORTHO05D007265 9.0e-97 358.2 486 40.1
Psat1g014320 Pisum sativum HOM05D005601 ORTHO05D007265 1.5e-96 357.5 448 39.3
Aa31LG7G820 Aethionema arabicum HOM05D005601 ORTHO05D007265 2.6e-96 356.7 427 41.2
AT1G16290 Arabidopsis thaliana HOM05D005601 ORTHO05D007265 3.4e-96 356.3 426 40.4
Lalb_Chr25g0284511 Lupinus albus HOM05D005601 ORTHO05D007265 7.7e-96 355.1 445 41.3
TWI38G0323 Tripterygium wilfordii HOM05D005601 ORTHO05D007265 1.0e-95 354.8 427 40.7
Thhalv10007775m.g Eutrema salsugineum HOM05D005601 ORTHO05D007265 2.2e-95 353.6 426 41.1
Sabra10G0131500 Salix brachista HOM05D005601 ORTHO05D007265 2.2e-95 353.6 427 41.2
Lj3g0011890 Lotus japonicus HOM05D005601 ORTHO05D007265 6.5e-95 352.1 448 40.8
SGA_v2.0_scaffold7G03617 Striga asiatica HOM05D005601 ORTHO05D007265 6.5e-95 352.1 431 42.0
Gorai.002G109700 Gossypium raimondii HOM05D005601 ORTHO05D007265 3.2e-94 349.7 431 40.1
Rhsim06G0242900 Rhododendron simsii HOM05D005601 ORTHO05D007265 3.2e-94 349.7 491 39.3
Atru.chr1.81 Acer truncatum HOM05D005601 ORTHO05D007265 9.4e-94 348.2 427 39.8
Lalb_Chr20g0108481 Lupinus albus HOM05D005601 ORTHO05D007265 3.6e-93 346.3 435 40.7
PGR031G2718 Punica granatum HOM05D005601 ORTHO05D007265 7.9e-93 345.1 454 39.6
SalBow8G4673 Salvia bowleyana HOM05D005601 ORTHO05D007265 1.5e-91 340.9 430 40.9
Aqoxy72s008 Aquilegia oxysepala HOM05D005601 ORTHO05D007265 9.7e-91 338.2 428 41.8
DCAR_016842 Daucus carota HOM05D005601 ORTHO05D000532 6.3e-90 335.5 453 40.4
TPR.G22999 Trifolium pratense HOM05D005601 ORTHO05D007265 8.2e-90 335.1 439 39.4
THA.LOC104812373 Tarenaya hassleriana HOM05D005601 ORTHO05D007265 1.1e-89 334.7 460 38.0
Zm00001eb207280 Zea mays HOM05D005601 ORTHO05D007265 1.3e-87 327.8 427 38.6
Gorai.013G145200 Gossypium raimondii HOM05D005601 ORTHO05D007265 6.5e-87 325.5 446 38.1
Gohir.A13G125400 Gossypium hirsutum HOM05D005601 ORTHO05D007265 8.5e-87 325.1 446 38.1
Thecc.07G184900 Theobroma cacao HOM05D005601 ORTHO05D007265 1.4e-86 324.3 427 38.2
SMO170G0006 Selaginella moellendorffii HOM05D005601 ORTHO05D007265 4.2e-86 322.8 385 41.6
Gohir.D13G129200 Gossypium hirsutum HOM05D005601 ORTHO05D007265 1.2e-85 321.2 446 37.7
arahy.Tifrunner.gnm1.ann1.5WL8RC Arachis hypogaea HOM05D005601 ORTHO05D007265 7.9e-85 318.5 399 40.9
MBI02_g08257_MAGBIO Magnolia biondii HOM05D005601 ORTHO05D007265 2.3e-84 317.0 359 44.6
FAN21G2538 Fragaria x ananassa HOM05D005601 ORTHO05D007265 8.8e-84 315.1 438 39.0
Oeu019720.3 Olea europaea HOM05D005601 ORTHO05D007265 1.4e-81 307.8 444 38.1
FAN16G1778 Fragaria x ananassa HOM05D005601 ORTHO05D007265 3.5e-80 303.1 438 38.1
Glyma.08G165100 Glycine max HOM05D005601 ORTHO05D007265 1.0e-79 301.6 445 37.1
Cc05_g16460 Coffea canephora HOM05D005601 ORTHO05D007265 3.8e-79 299.7 355 41.7
Ca_03553_v3 Cicer arietinum L. HOM05D005601 ORTHO05D007265 5.7e-75 285.8 429 36.6
Ca_29556_v3 Cicer arietinum L. HOM05D005601 ORTHO05D007265 5.7e-75 285.8 429 36.6
Gohir.A01G099600 Gossypium hirsutum HOM05D005601 ORTHO05D007265 2.2e-71 273.9 354 39.8
Sabra08G0062400 Salix brachista HOM05D005601 ORTHO05D007265 1.5e-70 271.2 456 33.8
Gohir.D01G084000 Gossypium hirsutum HOM05D005601 ORTHO05D007265 5.5e-70 269.2 359 38.2
Dinv19582 Davidia involucrata HOM05D005601 ORTHO05D007265 1.8e-52 211.1 192 53.1
Oeu034984.1 Olea europaea HOM05D005601 ORTHO05D007265 3.7e-50 203.4 203 49.3
unitig_26.g10063 Utricularia gibba HOM05D005601 ORTHO05D007265 1.4e-44 184.9 269 36.8
SEGI_07478 Sequoiadendron giganteum HOM05D005601 ORTHO05D007265 4.0e-44 183.3 120 70.0
Haze_07789 Corylus avellana HOM05D005601 ORTHO05D007265 4.1e-41 173.3 177 43.5
HPP92_016686 Vanilla planifolia HOM05D005601 ORTHO05D007265 6.0e-40 169.5 154 52.6
Dinv19583 Davidia involucrata HOM05D005601 ORTHO05D007265 2.3e-39 167.5 173 43.9
HPP92_016685 Vanilla planifolia HOM05D005601 ORTHO05D007265 2.4e-33 147.5 184 39.1
ATR0752G225 Amborella trichopoda HOM05D005601 ORTHO05D007265 9.2e-33 145.6 120 55.0
SEGI_07505 Sequoiadendron giganteum HOM05D005601 ORTHO05D007265 3.6e-29 133.7 142 44.4
Sabra07G0054100 Salix brachista HOM05D005601 ORTHO05D007265 1.8e-28 131.3 149 48.3
Sabra07G0054400 Salix brachista HOM05D005601 ORTHO05D007265 1.8e-28 131.3 149 48.3
Sabra07G0055500 Salix brachista HOM05D005601 ORTHO05D007265 1.8e-28 131.3 149 48.3
Sabra07G0054700 Salix brachista HOM05D005601 ORTHO05D007265 4.0e-28 130.2 149 48.3
Actinidia24664 Actinidia chinensis HOM05D005601 ORTHO05D007265 1.5e-27 128.3 173 34.7
Sabra07G0055700 Salix brachista HOM05D005601 ORTHO05D007265 5.8e-27 126.3 129 52.7
PRCOL_00003152 Prasinoderma coloniale HOM05D005601 ORTHO05D007265 7.1e-25 119.4 174 39.7
ATR0752G040 Amborella trichopoda HOM05D005601 ORTHO05D007265 2.1e-24 117.9 126 42.9
arahy.Tifrunner.gnm1.ann1.4IME1R Arachis hypogaea HOM05D005601 ORTHO05D007265 6.0e-24 116.3 150 35.3
unitig_26.g10062 Utricularia gibba HOM05D000493 ORTHO05D008479 1.1e-22 112.1 88 58.0
SEGI_02544 Sequoiadendron giganteum HOM05D005601 ORTHO05D007265 2.4e-20 104.4 75 58.7
Aqoxy4G01783 Aquilegia oxysepala HOM05D005601 ORTHO05D007265 2.4e-17 94.4 107 40.2
Aqoxy5G02624 Aquilegia oxysepala HOM05D005601 ORTHO05D007265 5.4e-17 93.2 122 36.9
Cc01_g09470 Coffea canephora HOM05D005601 ORTHO05D007265 5.4e-17 93.2 86 47.7
Cpa.g.sc32.54 Carica papaya HOM05D005601 ORTHO05D007265 7.1e-17 92.8 80 50.0
Sabra07G0055000 Salix brachista HOM05D005601 ORTHO05D007265 7.1e-17 92.8 88 53.4
SHI32865 Sapria himalayana HOM05D005601 ORTHO05D007265 7.1e-17 92.8 79 51.9
CSS0035233 Camellia sinensis var. sinensis HOM05D005601 ORTHO05D007265 6.0e-16 89.7 102 40.2
Cc05_g16470 Coffea canephora HOM05D005601 ORTHO05D007265 6.6e-15 86.3 83 47.0
ATR0752G173 Amborella trichopoda HOM05D005601 ORTHO05D007265 2.1e-13 81.3 61 52.5
SEGI_03880 Sequoiadendron giganteum HOM05D005601 ORTHO05D007265 2.8e-13 80.9 75 44.0
Zm00001eb338130 Zea mays HOM05D005601 ORTHO05D007265 9.0e-12 75.9 138 31.2
Medtr2g065540 Medicago truncatula HOM05D005601 ORTHO05D007265 2.6e-11 74.3 52 59.6
SHI32862 Sapria himalayana HOM05D005601 ORTHO05D007265 9.9e-11 72.4 53 54.7
SHI32867 Sapria himalayana HOM05D005601 ORTHO05D007265 1.4e-09 68.6 88 39.8
Zm00001eb249880 Zea mays HOM05D005601 ORTHO05D007265 2.1e-08 64.7 86 36.0
Zm00001eb234590 Zea mays HOM05D000076 ORTHO05D007265 7.3e-06 56.2 76 36.8


User provided reference genes

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