Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CBR_g31965 Chara braunii HOM05D000144 ORTHO05D008375 3.0e-110 401.7 185 100.0
Oeu014248.1 Olea europaea HOM05D000144 ORTHO05D008375 3.5e-79 298.5 174 73.6
SGA_v2.0_scaffold15G07454 Striga asiatica HOM05D000144 ORTHO05D008375 7.8e-79 297.4 174 73.0
AagrBONN_evm.TU.Sc2ySwM_368.588 Anthoceros agrestis HOM05D000144 ORTHO05D008375 1.3e-78 296.6 174 75.3
arahy.Tifrunner.gnm1.ann1.L6JH5D Arachis hypogaea HOM05D000144 ORTHO05D008375 3.9e-78 295.0 176 72.7
Mapoly0005s0265 Marchantia polymorpha HOM05D000144 ORTHO05D008375 5.1e-78 294.7 174 75.3
Dinv26930 Davidia involucrata HOM05D000144 ORTHO05D008375 8.7e-78 293.9 174 72.4
PGR004G0927 Punica granatum HOM05D000144 ORTHO05D008375 8.7e-78 293.9 180 70.0
VMungo1215G0773 Vigna mungo HOM05D000144 ORTHO05D008375 8.7e-78 293.9 174 71.8
GSVIVG01000108001 Vitis vinifera HOM05D000144 ORTHO05D008375 8.7e-78 293.9 174 73.0
Gohir.A12G077300 Gossypium hirsutum HOM05D000144 ORTHO05D008375 1.5e-77 293.1 174 72.4
Gohir.D12G075500 Gossypium hirsutum HOM05D000144 ORTHO05D008375 1.9e-77 292.7 174 71.8
Gorai.008G083600 Gossypium raimondii HOM05D000144 ORTHO05D008375 2.5e-77 292.4 174 71.8
Cc07_g07080 Coffea canephora HOM05D000144 ORTHO05D008375 3.3e-77 292.0 176 70.5
Nitab4.5_0002119g0110 Nicotiana tabacum HOM05D000144 ORTHO05D008375 3.3e-77 292.0 176 73.3
Actinidia36432 Actinidia chinensis HOM05D000144 ORTHO05D008375 5.6e-77 291.2 174 71.8
arahy.Tifrunner.gnm1.ann1.ZP9CR3 Arachis hypogaea HOM05D000144 ORTHO05D008375 5.6e-77 291.2 176 72.2
Glyma.11G047800 Glycine max HOM05D000144 ORTHO05D008375 5.6e-77 291.2 174 71.8
Lj7A97T18 Lonicera japonica HOM05D000144 ORTHO05D008375 5.6e-77 291.2 174 71.8
Phvul.002G010800 Phaseolus vulgaris HOM05D000144 ORTHO05D008375 5.6e-77 291.2 174 71.8
CiPaw.01G004600 Carya illinoinensis HOM05D000144 ORTHO05D008375 7.3e-77 290.8 176 69.9
Cfa004131 Carpinus fangiana HOM05D000144 ORTHO05D008375 1.3e-76 290.0 177 70.6
COL.COLO4_11575 Corchorus olitorius HOM05D000144 ORTHO05D008375 1.3e-76 290.0 176 70.5
Nn5g30589 Nelumbo nucifera HOM05D000144 ORTHO05D008375 1.3e-76 290.0 180 68.3
Prupe.6G220900 Prunus persica HOM05D000144 ORTHO05D008375 1.3e-76 290.0 174 72.4
ECA246G5277 Erigeron canadensis HOM05D000144 ORTHO05D008375 1.6e-76 289.7 177 70.6
Nitab4.5_0000142g0040 Nicotiana tabacum HOM05D000144 ORTHO05D008375 2.1e-76 289.3 174 73.0
Glyma.01G194100 Glycine max HOM05D000144 ORTHO05D008375 2.8e-76 288.9 174 71.3
Haze_15284 Corylus avellana HOM05D000144 ORTHO05D008375 4.8e-76 288.1 177 70.1
Lj2g0027160 Lotus japonicus HOM05D000144 ORTHO05D008375 4.8e-76 288.1 174 70.7
Medtr5g015500 Medicago truncatula HOM05D000144 ORTHO05D008375 4.8e-76 288.1 174 70.7
Solyc02g092380.4 Solanum lycopersicum HOM05D000144 ORTHO05D008375 4.8e-76 288.1 174 71.3
Sopen02g036930 Solanum pennellii HOM05D000144 ORTHO05D008375 4.8e-76 288.1 174 71.3
TWI09G0055 Tripterygium wilfordii HOM05D000144 ORTHO05D008375 4.8e-76 288.1 174 70.1
CAN.G1075.36 Capsicum annuum HOM05D000144 ORTHO05D008375 6.2e-76 287.7 174 71.8
Lalb_Chr16g0378861 Lupinus albus HOM05D000144 ORTHO05D008375 6.2e-76 287.7 174 70.7
THA.LOC104827618 Tarenaya hassleriana HOM05D000144 ORTHO05D008375 6.2e-76 287.7 174 70.7
TPR.G34857 Trifolium pratense HOM05D000144 ORTHO05D008375 8.1e-76 287.3 180 68.3
MSTRG.23672 Avicennia marina HOM05D000144 ORTHO05D008375 1.1e-75 287.0 174 70.7
Ciclev10025214m.g Citrus clementina HOM05D000144 ORTHO05D008375 1.1e-75 287.0 174 70.1
TWI73G1111 Tripterygium wilfordii HOM05D000144 ORTHO05D008375 1.1e-75 287.0 178 67.4
Atru.chr3.1009 Acer truncatum HOM05D000144 ORTHO05D008375 1.8e-75 286.2 180 67.8
ATR1153G005 Amborella trichopoda HOM05D000144 ORTHO05D008375 1.8e-75 286.2 174 71.3
Carub.0008s2694 Capsella rubella HOM05D000144 ORTHO05D008375 1.8e-75 286.2 180 68.3
MD15G1307700 Malus domestica HOM05D000144 ORTHO05D008375 1.8e-75 286.2 174 71.8
Psat2g171520 Pisum sativum HOM05D000144 ORTHO05D008375 1.8e-75 286.2 174 71.3
Thhalv10003864m.g Eutrema salsugineum HOM05D000144 ORTHO05D008375 2.4e-75 285.8 180 68.3
HanXRQChr15g0472631 Helianthus annuus HOM05D000144 ORTHO05D008375 2.4e-75 285.8 174 70.7
RcHm_v2.0_Chr2g0108011 Rosa chinensis HOM05D000144 ORTHO05D008375 2.4e-75 285.8 174 70.7
Thecc.01G072500 Theobroma cacao HOM05D000144 ORTHO05D008375 2.4e-75 285.8 174 69.5
Sp2g29120 Schrenkiella parvula HOM05D000144 ORTHO05D008375 3.1e-75 285.4 180 67.8
TAR381G1456 Trochodendron aralioides HOM05D000144 ORTHO05D008375 3.1e-75 285.4 174 69.5
MELO3C007631.2 Cucumis melo HOM05D000144 ORTHO05D008375 4.0e-75 285.0 174 70.7
Hma1.2p1_0852F.1_g228500 Hydrangea macrophylla HOM05D000144 ORTHO05D008375 4.0e-75 285.0 176 69.3
Pp3c18_21660 Physcomitrium patens HOM05D000144 ORTHO05D008375 4.0e-75 285.0 174 70.1
PGSC0003DMG400021445 Solanum tuberosum HOM05D000144 ORTHO05D008375 4.0e-75 285.0 174 70.7
ClCG01G017550 Citrullus lanatus HOM05D000144 ORTHO05D008375 5.3e-75 284.6 174 70.1
Eucgr.I00705 Eucalyptus grandis HOM05D000144 ORTHO05D008375 5.3e-75 284.6 174 69.5
Ca_24694_v3 Cicer arietinum L. HOM05D000144 ORTHO05D008375 6.9e-75 284.3 174 71.8
Cpa.g.sc6.18 Carica papaya HOM05D000144 ORTHO05D008375 9.0e-75 283.9 178 69.7
AL8G43770 Arabidopsis lyrata HOM05D000144 ORTHO05D008375 1.2e-74 283.5 180 67.8
SalBow3G3765 Salvia bowleyana HOM05D000144 ORTHO05D008375 1.2e-74 283.5 174 70.7
AT5G67530 Arabidopsis thaliana HOM05D000144 ORTHO05D008375 1.5e-74 283.1 180 67.8
C03p59580 Brassica napus HOM05D000144 ORTHO05D008375 1.5e-74 283.1 180 67.2
Sed0012214 Sechium edule HOM05D000144 ORTHO05D008375 1.5e-74 283.1 174 69.0
Lsat_1_v5_gn_3_86200 Lactuca sativa HOM05D000144 ORTHO05D008375 2.0e-74 282.7 174 70.7
HPP92_024498 Vanilla planifolia HOM05D000144 ORTHO05D008375 2.6e-74 282.3 174 68.4
Zm00001eb007780 Zea mays HOM05D000144 ORTHO05D008375 2.6e-74 282.3 174 69.5
CSS0036973 Camellia sinensis var. sinensis HOM05D000144 ORTHO05D008375 3.4e-74 282.0 174 69.0
CsaV3_6G044090 Cucumis sativus L. HOM05D000144 ORTHO05D008375 3.4e-74 282.0 174 70.1
Manes.12G114000 Manihot esculenta HOM05D000144 ORTHO05D008375 3.4e-74 282.0 180 68.9
A06p32890 Brassica napus HOM05D000144 ORTHO05D008375 4.5e-74 281.6 180 66.7
BolC3t18222H Brassica oleracea HOM05D000144 ORTHO05D008375 4.5e-74 281.6 180 66.7
BraA06t26220Z Brassica rapa HOM05D000144 ORTHO05D008375 4.5e-74 281.6 180 66.7
CARHR280050 Cardamine hirsuta HOM05D000144 ORTHO05D008375 4.5e-74 281.6 180 67.2
FAN26G3316 Fragaria x ananassa HOM05D000144 ORTHO05D008375 4.5e-74 281.6 174 70.7
FAN28G1584 Fragaria x ananassa HOM05D000144 ORTHO05D008375 4.5e-74 281.6 174 70.7
unitig_699.g19438 Utricularia gibba HOM05D000144 ORTHO05D008375 5.8e-74 281.2 182 69.8
Migut.H00349 Erythranthe guttata HOM05D000144 ORTHO05D008375 7.6e-74 280.8 174 70.1
MD02G1185800 Malus domestica HOM05D000144 ORTHO05D008375 1.3e-73 280.0 174 70.7
BcaB02g09915 Brassica carinata HOM05D000144 ORTHO05D008375 1.7e-73 279.6 180 66.1
FvH4_1g17680 Fragaria vesca HOM05D000144 ORTHO05D008375 1.7e-73 279.6 174 70.1
Aqoxy6G02612 Aquilegia oxysepala HOM05D000144 ORTHO05D008375 2.2e-73 279.3 174 67.8
PSO541G5893 Papaver somniferum HOM05D000144 ORTHO05D008375 2.2e-73 279.3 174 68.4
PSO675G3797 Papaver somniferum HOM05D000144 ORTHO05D008375 2.2e-73 279.3 174 68.4
FAN19G2025 Fragaria x ananassa HOM05D000144 ORTHO05D008375 4.9e-73 278.1 174 69.5
SMO356G0468 Selaginella moellendorffii HOM05D000144 ORTHO05D008375 1.1e-72 276.9 176 67.6
Ah.03g140560 Amaranthus hybridus HOM05D000144 ORTHO05D008375 1.9e-72 276.2 175 68.6
Hund16400 Selenicereus undatus HOM05D000144 ORTHO05D008375 4.2e-72 275.0 175 68.6
EL10Ac6g15620 Beta vulgaris HOM05D000144 ORTHO05D008375 2.1e-71 272.7 175 67.4
Potri.005G148900 Populus trichocarpa HOM05D000144 ORTHO05D008375 4.6e-71 271.6 174 66.1
Aa31LG1G16080 Aethionema arabicum HOM05D000144 ORTHO05D008375 6.0e-71 271.2 176 65.9
Sabra05G0118600 Salix brachista HOM05D000144 ORTHO05D008375 7.9e-71 270.8 174 66.1
Oeu013322.1 Olea europaea HOM05D000144 ORTHO05D008375 1.5e-69 266.5 237 53.6
Cre10.g457000 Chlamydomonas reinhardtii HOM05D000144 ORTHO05D008375 1.5e-66 256.5 174 63.8
MCO14G312 Micromonas commoda HOM05D000144 ORTHO05D008375 6.0e-63 244.6 174 62.1
CDE07G1536 Ceratophyllum demersum HOM05D000144 ORTHO05D008375 7.4e-61 237.7 144 69.4
Peaxi162Scf00548g00659 Petunia axillaris HOM05D000144 ORTHO05D008375 1.3e-60 236.9 174 61.5
vmacro05409 Vaccinium macrocarpon HOM05D000144 ORTHO05D008375 1.4e-59 233.4 282 42.6
Rhsim10G0099600 Rhododendron simsii HOM05D000144 ORTHO05D008375 1.8e-59 233.0 174 60.9
AUR62040239 Chenopodium quinoa HOM05D000144 ORTHO05D008375 4.0e-59 231.9 175 60.6
FAN23G2810 Fragaria x ananassa HOM05D000144 ORTHO05D008375 9.0e-59 230.7 141 71.6
Sc16g0002880 Simmondsia chinensis HOM05D000144 ORTHO05D008375 2.9e-57 225.7 152 67.8
DCAR_025800 Daucus carota HOM05D000144 ORTHO05D008375 3.3e-53 212.2 186 54.3
Os03g0201100 Oryza sativa ssp. japonica HOM05D000144 ORTHO05D008375 2.6e-50 202.6 119 70.6
SEGI_30666 Sequoiadendron giganteum HOM05D000144 ORTHO05D008375 6.5e-49 198.0 120 71.7
EL10As2g23225 Beta vulgaris HOM05D000144 ORTHO05D008375 2.8e-44 182.6 120 66.7
Actinidia11983 Actinidia chinensis HOM05D000144 ORTHO05D008375 1.9e-40 169.9 111 67.6
AUR62004008 Chenopodium quinoa HOM05D000144 ORTHO05D008375 7.4e-37 157.9 175 48.0
Hma1.2p1_0852F.1_g228490 Hydrangea macrophylla HOM05D000144 ORTHO05D008375 9.1e-35 151.0 91 69.2
PRCOL_00004771 Prasinoderma coloniale HOM05D000144 ORTHO05D008375 4.5e-34 148.7 159 47.8
GSVIVG01000117001 Vitis vinifera HOM05D000144 ORTHO05D008375 4.5e-34 148.7 89 70.8
Hma1.2p1_0852F.1_g228510 Hydrangea macrophylla HOM05D000144 ORTHO05D008375 1.6e-31 140.2 87 69.0
Lj3g0021449 Lotus japonicus HOM05D000144 ORTHO05D008375 6.5e-17 91.7 58 62.1
MBI12_g43206_MAGBIO Magnolia biondii HOM05D000144 ORTHO05D008375 1.9e-16 90.1 56 64.3
MBI12_g04926_MAGBIO Magnolia biondii HOM05D000144 ORTHO05D008375 4.2e-16 89.0 53 67.9
Lsat_1_v5_gn_8_75860 Lactuca sativa HOM05D000144 ORTHO05D008375 1.8e-06 57.0 35 65.7
CSS0003961 Camellia sinensis var. sinensis HOM05D000144 ORTHO05D113215 2.3e-06 56.6 67 46.3


User provided reference genes

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