Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CBR_g3124 Chara braunii HOM05D006814 ORTHO05D008613 3.7e-157 558.1 276 100.0
Mapoly0097s0033 Marchantia polymorpha HOM05D006814 ORTHO05D008613 5.6e-81 305.1 261 57.9
SEGI_31198 Sequoiadendron giganteum HOM05D006814 ORTHO05D008613 1.2e-78 297.4 259 57.5
AagrBONN_evm.TU.Sc2ySwM_228.215 Anthoceros agrestis HOM05D006814 ORTHO05D008613 6.4e-77 291.6 259 57.5
Pp3c10_20230 Physcomitrium patens HOM05D006814 ORTHO05D008613 1.7e-74 283.5 257 56.0
TAR629G1931 Trochodendron aralioides HOM05D006814 ORTHO05D008613 1.1e-73 280.8 261 53.6
CiPaw.11G097800 Carya illinoinensis HOM05D006814 ORTHO05D008613 9.6e-73 277.7 259 54.4
CiPaw.11G096600 Carya illinoinensis HOM05D006814 ORTHO05D008613 2.1e-72 276.6 259 54.1
Lj8A305G45 Lonicera japonica HOM05D006814 ORTHO05D008613 3.6e-72 275.8 259 54.1
Prupe.4G270400 Prunus persica HOM05D006814 ORTHO05D008613 1.1e-71 274.2 266 52.6
MD11G1183600 Malus domestica HOM05D006814 ORTHO05D008613 1.4e-71 273.9 265 52.5
GSVIVG01013112001 Vitis vinifera HOM05D006814 ORTHO05D008613 1.4e-71 273.9 258 53.9
Aqoxy4G00304 Aquilegia oxysepala HOM05D006814 ORTHO05D008613 2.4e-71 273.1 270 51.9
Hma1.2p1_0586F.1_g183880 Hydrangea macrophylla HOM05D006814 ORTHO05D008613 3.1e-71 272.7 264 53.4
Nn1g02991 Nelumbo nucifera HOM05D006814 ORTHO05D008613 3.1e-71 272.7 258 53.1
Cc08_g03190 Coffea canephora HOM05D006814 ORTHO05D008613 6.9e-71 271.6 263 52.1
CAN.G298.54 Capsicum annuum HOM05D006814 ORTHO05D008613 1.5e-70 270.4 257 52.5
AUR62007326 Chenopodium quinoa HOM05D006814 ORTHO05D008613 1.5e-70 270.4 258 53.5
RcHm_v2.0_Chr7g0211071 Rosa chinensis HOM05D006814 ORTHO05D008613 1.5e-70 270.4 259 51.7
Rhsim11G0018900 Rhododendron simsii HOM05D006814 ORTHO05D008613 2.0e-70 270.0 259 52.5
Cfa012484 Carpinus fangiana HOM05D006814 ORTHO05D008613 2.6e-70 269.6 259 52.5
Manes.02G107600 Manihot esculenta HOM05D006814 ORTHO05D008613 2.6e-70 269.6 263 52.1
CSS0047525 Camellia sinensis var. sinensis HOM05D006814 ORTHO05D008613 4.5e-70 268.9 263 52.1
SMO358G0599 Selaginella moellendorffii HOM05D006814 ORTHO05D008613 4.5e-70 268.9 260 54.2
Hund14354 Selenicereus undatus HOM05D006814 ORTHO05D008613 7.6e-70 268.1 258 52.7
PGSC0003DMG400014801 Solanum tuberosum HOM05D006814 ORTHO05D008613 7.6e-70 268.1 257 52.5
Cpa.g.sc87.105 Carica papaya HOM05D006814 ORTHO05D008613 9.9e-70 267.7 265 50.6
FvH4_5g22650 Fragaria vesca HOM05D006814 ORTHO05D008613 9.9e-70 267.7 259 51.4
Peaxi162Scf00170g01111 Petunia axillaris HOM05D006814 ORTHO05D008613 9.9e-70 267.7 257 52.1
FAN04G0609 Fragaria x ananassa HOM05D006814 ORTHO05D008613 1.3e-69 267.3 259 51.4
FAN08G0276 Fragaria x ananassa HOM05D006814 ORTHO05D008613 1.3e-69 267.3 259 51.4
FAN18G2202 Fragaria x ananassa HOM05D006814 ORTHO05D008613 1.3e-69 267.3 259 51.4
Sabra01G0108000 Salix brachista HOM05D006814 ORTHO05D008613 1.3e-69 267.3 259 52.1
Carub.0007s2360 Capsella rubella HOM05D006814 ORTHO05D008613 1.7e-69 266.9 258 51.6
PSO063G6077 Papaver somniferum HOM05D006814 ORTHO05D008613 1.7e-69 266.9 263 51.3
Solyc08g076610.4 Solanum lycopersicum HOM05D006814 ORTHO05D008613 1.7e-69 266.9 257 51.8
Atru.chr6.1626 Acer truncatum HOM05D006814 ORTHO05D008613 2.2e-69 266.5 264 51.5
Actinidia03355 Actinidia chinensis HOM05D006814 ORTHO05D008613 2.2e-69 266.5 264 51.5
MELO3C008839.2 Cucumis melo HOM05D006814 ORTHO05D008613 2.2e-69 266.5 264 51.1
Nitab4.5_0000685g0010 Nicotiana tabacum HOM05D006814 ORTHO05D008613 2.2e-69 266.5 257 52.1
Sc07g0008590 Simmondsia chinensis HOM05D006814 ORTHO05D008613 2.9e-69 266.2 258 53.5
MSTRG.24841 Avicennia marina HOM05D006814 ORTHO05D008613 3.8e-69 265.8 259 52.9
Potri.001G139100 Populus trichocarpa HOM05D006814 ORTHO05D008613 3.8e-69 265.8 259 52.5
TWI60G0232 Tripterygium wilfordii HOM05D006814 ORTHO05D008613 4.9e-69 265.4 259 51.0
FAN18G0582 Fragaria x ananassa HOM05D006814 ORTHO05D008613 6.4e-69 265.0 259 51.0
CsaV3_4G012030 Cucumis sativus L. HOM05D006814 ORTHO05D008613 8.4e-69 264.6 264 50.8
Thhalv10025847m.g Eutrema salsugineum HOM05D006814 ORTHO05D008613 8.4e-69 264.6 258 50.4
Psat4g131760 Pisum sativum HOM05D006814 ORTHO05D008613 8.4e-69 264.6 258 50.8
Sopen08g025160 Solanum pennellii HOM05D006814 ORTHO05D008613 1.1e-68 264.2 257 51.4
Lsat_1_v5_gn_3_19041 Lactuca sativa HOM05D006814 ORTHO05D008613 1.4e-68 263.8 261 51.0
QL12p004459 Quercus lobata HOM05D006814 ORTHO05D008613 1.9e-68 263.5 287 49.1
COL.COLO4_16971 Corchorus olitorius HOM05D006814 ORTHO05D008613 2.4e-68 263.1 271 49.4
HanXRQChr17g0538231 Helianthus annuus HOM05D006814 ORTHO05D008613 2.4e-68 263.1 263 50.6
Migut.A01081 Erythranthe guttata HOM05D006814 ORTHO05D008613 3.2e-68 262.7 262 53.1
HanXRQChr17g0538211 Helianthus annuus HOM05D006814 ORTHO05D008613 3.2e-68 262.7 263 50.6
AL7G36810 Arabidopsis lyrata HOM05D006814 ORTHO05D008613 4.2e-68 262.3 258 50.8
BcaNung04035 Brassica carinata HOM05D006814 ORTHO05D008613 4.2e-68 262.3 258 50.4
A03p50690 Brassica napus HOM05D006814 ORTHO05D008613 4.2e-68 262.3 258 50.4
CANSAT21G0682 Cannabis sativa HOM05D006814 ORTHO05D008613 4.2e-68 262.3 259 51.0
Duzib205G0392 Durio zibethinus HOM05D006814 ORTHO05D008613 7.1e-68 261.5 262 50.0
BraA03t14161Z Brassica rapa HOM05D006814 ORTHO05D008613 1.2e-67 260.8 258 50.0
DCAR_032083 Daucus carota HOM05D006814 ORTHO05D008613 1.6e-67 260.4 259 51.7
Gohir.A08G154800 Gossypium hirsutum HOM05D006814 ORTHO05D008613 1.6e-67 260.4 262 50.0
Medtr8g447310 Medicago truncatula HOM05D006814 ORTHO05D008613 1.6e-67 260.4 258 51.9
Thecc.03G307100 Theobroma cacao HOM05D006814 ORTHO05D008613 1.6e-67 260.4 257 50.2
BcaC06g33591 Brassica carinata HOM05D006814 ORTHO05D008613 2.1e-67 260.0 258 50.0
BolC7t45420H Brassica oleracea HOM05D006814 ORTHO05D008613 2.1e-67 260.0 258 50.0
Ciclev10032236m.g Citrus clementina HOM05D006814 ORTHO05D008613 2.7e-67 259.6 260 50.0
Aa31LG6G500 Aethionema arabicum HOM05D006814 ORTHO05D008613 3.5e-67 259.2 258 50.0
ClCG04G005520 Citrullus lanatus HOM05D006814 ORTHO05D008613 3.5e-67 259.2 255 50.2
Gorai.004G183200 Gossypium raimondii HOM05D006814 ORTHO05D008613 3.5e-67 259.2 262 50.0
arahy.Tifrunner.gnm1.ann1.DD0PLV Arachis hypogaea HOM05D006814 ORTHO05D008613 4.6e-67 258.8 258 50.8
arahy.Tifrunner.gnm1.ann1.S7AV19 Arachis hypogaea HOM05D006814 ORTHO05D008613 4.6e-67 258.8 258 50.8
CARHR224480 Cardamine hirsuta HOM05D006814 ORTHO05D008613 4.6e-67 258.8 258 50.0
Ca_26271_v3 Cicer arietinum L. HOM05D006814 ORTHO05D008613 6.0e-67 258.5 263 50.6
PGR031G2224 Punica granatum HOM05D006814 ORTHO05D008613 6.0e-67 258.5 259 50.6
THA.LOC104798334 Tarenaya hassleriana HOM05D006814 ORTHO05D008613 6.0e-67 258.5 258 49.2
AUR62018677 Chenopodium quinoa HOM05D006814 ORTHO05D008613 7.9e-67 258.1 237 54.4
Gohir.D08G175300 Gossypium hirsutum HOM05D006814 ORTHO05D008613 7.9e-67 258.1 257 49.4
Sp7g16350 Schrenkiella parvula HOM05D006814 ORTHO05D008613 1.3e-66 257.3 258 50.0
TPR.G8183 Trifolium pratense HOM05D006814 ORTHO05D008613 1.3e-66 257.3 258 50.8
Lj3g0020867 Lotus japonicus HOM05D006814 ORTHO05D008613 1.8e-66 256.9 263 50.6
Glyma.20G095300 Glycine max HOM05D006814 ORTHO05D008613 2.3e-66 256.5 261 50.6
CDE11G0551 Ceratophyllum demersum HOM05D006814 ORTHO05D008613 3.0e-66 256.1 261 47.1
VMungo0251G2608 Vigna mungo HOM05D006814 ORTHO05D008613 3.9e-66 255.8 260 50.0
SGA_v2.0_scaffold36G14306 Striga asiatica HOM05D006814 ORTHO05D008613 5.1e-66 255.4 287 48.8
Lalb_Chr05g0228761 Lupinus albus HOM05D006814 ORTHO05D008613 6.7e-66 255.0 258 50.4
vmacro00308 Vaccinium macrocarpon HOM05D006814 ORTHO05D008613 1.9e-65 253.4 279 47.0
ECA246G4850 Erigeron canadensis HOM05D006814 ORTHO05D008613 3.3e-65 252.7 276 48.2
Os06g0132600 Oryza sativa ssp. japonica HOM05D006814 ORTHO05D008613 4.3e-65 252.3 221 54.8
C07p49120 Brassica napus HOM05D006814 ORTHO05D008613 2.8e-64 249.6 254 48.8
Aa31LG9G8590 Aethionema arabicum HOM05D006814 ORTHO05D008613 1.8e-63 246.9 258 48.4
ATR0772G225 Amborella trichopoda HOM05D006814 ORTHO05D008613 9.0e-63 244.6 259 49.0
Zm00001eb269700 Zea mays HOM05D006814 ORTHO05D008613 2.0e-62 243.4 259 48.3
Oeu005300.2 Olea europaea HOM05D006814 ORTHO05D008613 3.4e-62 242.7 315 44.4
HPP92_020943 Vanilla planifolia HOM05D003640 ORTHO05D008613 2.9e-61 239.6 260 47.3
EL10Ac5g12048 Beta vulgaris HOM05D006814 ORTHO05D008613 7.9e-59 231.5 263 48.7
Haze_08181 Corylus avellana HOM05D006814 ORTHO05D008613 1.1e-49 201.1 259 44.0
AT4G17760 Arabidopsis thaliana HOM05D006814 ORTHO05D008613 7.4e-49 198.4 200 50.5
Sed0016076 Sechium edule HOM05D006814 ORTHO05D008613 8.2e-48 194.9 169 53.8
Eucgr.D02215 Eucalyptus grandis HOM05D006814 ORTHO05D008613 7.9e-43 178.3 148 58.1
Dinv28983 Davidia involucrata HOM05D006814 ORTHO05D008613 1.1e-41 174.5 150 57.3
Phvul.003G283200 Phaseolus vulgaris HOM05D006814 ORTHO05D008613 4.1e-39 166.0 155 52.9
SalBow6G3153 Salvia bowleyana HOM05D006814 ORTHO05D008613 7.7e-38 161.8 202 45.0
GSVIVG01003310001 Vitis vinifera HOM05D006814 ORTHO05D008613 3.8e-37 159.5 152 50.7
DCAR_021700 Daucus carota HOM05D006814 ORTHO05D013862 3.8e-29 132.9 159 44.0
Hma1.2p1_0572F.1_g181150 Hydrangea macrophylla HOM05D006814 ORTHO05D008613 8.5e-29 131.7 154 46.8
Nitab4.5_0025014g0010 Nicotiana tabacum HOM05D006814 ORTHO05D008613 5.3e-23 112.5 114 49.1
Cre03.g162250 Chlamydomonas reinhardtii HOM05D006814 ORTHO05D008613 2.2e-21 107.1 248 29.8
MCO03G144 Micromonas commoda HOM05D006814 ORTHO05D008613 1.0e-18 98.2 257 27.2
CAN.G298.53 Capsicum annuum HOM05D006814 ORTHO05D008613 1.8e-18 97.4 120 43.3
CAN.G298.50 Capsicum annuum HOM05D006814 ORTHO05D008613 4.4e-17 92.8 111 43.2
Glyma.10G145666 Glycine max HOM05D006814 ORTHO05D008613 1.5e-12 77.8 64 57.8
Actinidia25984 Actinidia chinensis HOM05D006814 ORTHO05D008613 7.2e-12 75.5 95 46.3
CAN.G2435.1 Capsicum annuum HOM05D006814 ORTHO05D008613 2.3e-10 70.5 94 42.6
Hma1.2p1_0586F.1_g183890 Hydrangea macrophylla HOM05D006814 ORTHO05D008613 1.1e-07 61.6 63 47.6


User provided reference genes

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